BLASTX nr result

ID: Dioscorea21_contig00033728 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00033728
         (602 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAY76931.1| hypothetical protein OsI_04889 [Oryza sativa Indi...   159   3e-37
ref|NP_001045168.1| Os01g0912900 [Oryza sativa Japonica Group] g...   159   3e-37
ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat...   150   2e-34
emb|CAN66059.1| hypothetical protein VITISV_017037 [Vitis vinifera]   150   2e-34
ref|XP_002458969.1| hypothetical protein SORBIDRAFT_03g043550 [S...   149   5e-34

>gb|EAY76931.1| hypothetical protein OsI_04889 [Oryza sativa Indica Group]
          Length = 565

 Score =  159 bits (403), Expect = 3e-37
 Identities = 84/192 (43%), Positives = 111/192 (57%), Gaps = 1/192 (0%)
 Frame = +2

Query: 26  PLLLPAFNRAIRALSKPHPXXXXXXXXXXXXXXXXPDNFTIPFXXXXXXXXXXXXXXXXX 205
           P++    NRAIR LSKPHP                PD+F++PF                 
Sbjct: 44  PVIRSLLNRAIRRLSKPHPRAALRLLLLMPRLPVSPDHFSLPFALNAAASLRLLPLGASL 103

Query: 206 HSRSLRTGLFPF-LPVANALIDMYGKCSDLSSARKVFDEMRVRDVVSFNALLGAHARVGV 382
           H+ +LR  L P  LPVANAL+D+Y KC DL +A     ++   D VSFN+LL AHAR+  
Sbjct: 104 HALALRLALLPGRLPVANALVDLYAKCDDLPAAHTALADIAAPDAVSFNSLLCAHARL-A 162

Query: 383 DMAEARRLFDEMPQRNAITWNAMVVGYVNCGDLRSARAVFDEMPVRNLVSWTVMLMGYTK 562
            + +A  LF  MP R  ++WNAMVV YVN GD+ SAR VFD+MP R+  SW+V+++GY K
Sbjct: 163 SVPDAESLFAAMPSRTQVSWNAMVVVYVNAGDVSSARRVFDQMPTRDSTSWSVLIVGYCK 222

Query: 563 SGLMEDASDLFD 598
            G M  A ++FD
Sbjct: 223 CGSMRSAREVFD 234



 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 37/113 (32%), Positives = 62/113 (54%)
 Frame = +2

Query: 254 NALIDMYGKCSDLSSARKVFDEMRVRDVVSFNALLGAHARVGVDMAEARRLFDEMPQRNA 433
           NA++ +Y    D+SSAR+VFD+M  RD  S++ L+  + + G  M  AR +FD MP +N 
Sbjct: 183 NAMVVVYVNAGDVSSARRVFDQMPTRDSTSWSVLIVGYCKCG-SMRSAREVFDRMPAKNL 241

Query: 434 ITWNAMVVGYVNCGDLRSARAVFDEMPVRNLVSWTVMLMGYTKSGLMEDASDL 592
           + W AM+ GY   G  + + A+F EM    +      ++G   +     +++L
Sbjct: 242 VAWTAMINGYAQSGVPKESLALFREMEAAGIEPDAATMVGVISAASQIGSTEL 294


>ref|NP_001045168.1| Os01g0912900 [Oryza sativa Japonica Group]
           gi|20161377|dbj|BAB90301.1| selenium-binding
           protein-like [Oryza sativa Japonica Group]
           gi|113534699|dbj|BAF07082.1| Os01g0912900 [Oryza sativa
           Japonica Group] gi|125573076|gb|EAZ14591.1| hypothetical
           protein OsJ_04514 [Oryza sativa Japonica Group]
          Length = 533

 Score =  159 bits (403), Expect = 3e-37
 Identities = 84/192 (43%), Positives = 111/192 (57%), Gaps = 1/192 (0%)
 Frame = +2

Query: 26  PLLLPAFNRAIRALSKPHPXXXXXXXXXXXXXXXXPDNFTIPFXXXXXXXXXXXXXXXXX 205
           P++    NRAIR LSKPHP                PD+F++PF                 
Sbjct: 44  PVIRSLLNRAIRRLSKPHPRAALRLLLLMPRLPVSPDHFSLPFALNAAASLRLLPLGASL 103

Query: 206 HSRSLRTGLFPF-LPVANALIDMYGKCSDLSSARKVFDEMRVRDVVSFNALLGAHARVGV 382
           H+ +LR  L P  LPVANAL+D+Y KC DL +A     ++   D VSFN+LL AHAR+  
Sbjct: 104 HALALRLALLPCRLPVANALVDLYAKCDDLPAAHTALADIAAPDAVSFNSLLCAHARL-A 162

Query: 383 DMAEARRLFDEMPQRNAITWNAMVVGYVNCGDLRSARAVFDEMPVRNLVSWTVMLMGYTK 562
            + +A  LF  MP R  ++WNAMVV YVN GD+ SAR VFD+MP R+  SW+V+++GY K
Sbjct: 163 SVPDAESLFVAMPSRTQVSWNAMVVVYVNAGDVSSARRVFDQMPTRDSTSWSVLIVGYCK 222

Query: 563 SGLMEDASDLFD 598
            G M  A ++FD
Sbjct: 223 CGSMRSAREVFD 234



 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 37/113 (32%), Positives = 62/113 (54%)
 Frame = +2

Query: 254 NALIDMYGKCSDLSSARKVFDEMRVRDVVSFNALLGAHARVGVDMAEARRLFDEMPQRNA 433
           NA++ +Y    D+SSAR+VFD+M  RD  S++ L+  + + G  M  AR +FD MP +N 
Sbjct: 183 NAMVVVYVNAGDVSSARRVFDQMPTRDSTSWSVLIVGYCKCG-SMRSAREVFDRMPAKNL 241

Query: 434 ITWNAMVVGYVNCGDLRSARAVFDEMPVRNLVSWTVMLMGYTKSGLMEDASDL 592
           + W AM+ GY   G  + + A+F EM    +      ++G   +     +++L
Sbjct: 242 VAWTAMINGYAQSGVPKESLALFREMEAAGIEPDAATMVGVISAASQIGSTEL 294


>ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g37570 [Vitis vinifera]
          Length = 561

 Score =  150 bits (379), Expect = 2e-34
 Identities = 76/157 (48%), Positives = 103/157 (65%)
 Frame = +2

Query: 131 PDNFTIPFXXXXXXXXXXXXXXXXXHSRSLRTGLFPFLPVANALIDMYGKCSDLSSARKV 310
           PD FT P                  H  ++R G+   + V  +LID+YGKC ++  ARKV
Sbjct: 121 PDKFTYPSLIKACSKVCGVKEGVAFHGSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKV 180

Query: 311 FDEMRVRDVVSFNALLGAHARVGVDMAEARRLFDEMPQRNAITWNAMVVGYVNCGDLRSA 490
           FDEM  R+VVS+ A++  +A    D+ EAR+LFDEMP++NA++WNA++ GYV CGDLRSA
Sbjct: 181 FDEMGERNVVSWTAMIAGYASFS-DLVEARKLFDEMPEKNAVSWNAIISGYVKCGDLRSA 239

Query: 491 RAVFDEMPVRNLVSWTVMLMGYTKSGLMEDASDLFDE 601
           R +FDEMP RN+VS+T M+ GY KSG M  A  +F+E
Sbjct: 240 RKMFDEMPHRNVVSFTTMIDGYAKSGDMASARFVFEE 276



 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 44/91 (48%), Positives = 61/91 (67%)
 Frame = +2

Query: 254 NALIDMYGKCSDLSSARKVFDEMRVRDVVSFNALLGAHARVGVDMAEARRLFDEMPQRNA 433
           NA+I  Y KC DL SARK+FDEM  R+VVSF  ++  +A+ G DMA AR +F+E P+R+ 
Sbjct: 224 NAIISGYVKCGDLRSARKMFDEMPHRNVVSFTTMIDGYAKSG-DMASARFVFEEAPERDV 282

Query: 434 ITWNAMVVGYVNCGDLRSARAVFDEMPVRNL 526
           + W+A++ GYV  G    A  +F EM  RN+
Sbjct: 283 VAWSALISGYVQNGQPNEAVKIFLEMCSRNV 313


>emb|CAN66059.1| hypothetical protein VITISV_017037 [Vitis vinifera]
          Length = 546

 Score =  150 bits (379), Expect = 2e-34
 Identities = 76/157 (48%), Positives = 103/157 (65%)
 Frame = +2

Query: 131 PDNFTIPFXXXXXXXXXXXXXXXXXHSRSLRTGLFPFLPVANALIDMYGKCSDLSSARKV 310
           PD FT P                  H  ++R G+   + V  +LID+YGKC ++  ARKV
Sbjct: 121 PDKFTYPSLIKACSKVCGVKEGVAFHGSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKV 180

Query: 311 FDEMRVRDVVSFNALLGAHARVGVDMAEARRLFDEMPQRNAITWNAMVVGYVNCGDLRSA 490
           FDEM  R+VVS+ A++  +A    D+ EAR+LFDEMP++NA++WNA++ GYV CGDLRSA
Sbjct: 181 FDEMGERNVVSWTAMIAGYASFS-DLVEARKLFDEMPEKNAVSWNAIISGYVKCGDLRSA 239

Query: 491 RAVFDEMPVRNLVSWTVMLMGYTKSGLMEDASDLFDE 601
           R +FDEMP RN+VS+T M+ GY KSG M  A  +F+E
Sbjct: 240 RKMFDEMPHRNVVSFTTMIDGYAKSGDMASARFVFEE 276


>ref|XP_002458969.1| hypothetical protein SORBIDRAFT_03g043550 [Sorghum bicolor]
           gi|241930944|gb|EES04089.1| hypothetical protein
           SORBIDRAFT_03g043550 [Sorghum bicolor]
          Length = 530

 Score =  149 bits (375), Expect = 5e-34
 Identities = 83/195 (42%), Positives = 108/195 (55%), Gaps = 1/195 (0%)
 Frame = +2

Query: 20  ASPLLLPAFNRAIRALSKPHPXXXXXXXXXXXXXXXXPDNFTIPFXXXXXXXXXXXXXXX 199
           A  L+    N AI  LSKP P                PD+FT+PF               
Sbjct: 43  APNLVRSLVNGAISRLSKPRPRAALALLLLMPRLPVLPDHFTLPFALNAAASLRLLPLGA 102

Query: 200 XXHSRSLRTGLFPF-LPVANALIDMYGKCSDLSSARKVFDEMRVRDVVSFNALLGAHARV 376
             H+ + R GL P  LPVANAL+D+Y KC + S+A     ++   D VSFN+LL AHAR 
Sbjct: 103 SLHAVAFRLGLLPLRLPVANALVDLYAKCEEFSAAHAALADIPAPDAVSFNSLLCAHAR- 161

Query: 377 GVDMAEARRLFDEMPQRNAITWNAMVVGYVNCGDLRSARAVFDEMPVRNLVSWTVMLMGY 556
              +  A  LF  M  R  ++WNAMVV YV+ GDL SAR VFDEMP R+  SW+V++ GY
Sbjct: 162 NASVRPAESLFAAMRSRTQVSWNAMVVLYVSAGDLVSARRVFDEMPTRDTASWSVLIAGY 221

Query: 557 TKSGLMEDASDLFDE 601
            K GL+++A +LFD+
Sbjct: 222 CKGGLVQNARELFDK 236



 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 34/86 (39%), Positives = 54/86 (62%)
 Frame = +2

Query: 254 NALIDMYGKCSDLSSARKVFDEMRVRDVVSFNALLGAHARVGVDMAEARRLFDEMPQRNA 433
           NA++ +Y    DL SAR+VFDEM  RD  S++ L+  + + G+ +  AR LFD+MP +N 
Sbjct: 184 NAMVVLYVSAGDLVSARRVFDEMPTRDTASWSVLIAGYCKGGL-VQNARELFDKMPSKNL 242

Query: 434 ITWNAMVVGYVNCGDLRSARAVFDEM 511
           +   AM+ GY   G  ++A A+F ++
Sbjct: 243 VARTAMINGYAQTGQPKAALALFRDL 268


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