BLASTX nr result

ID: Dioscorea21_contig00033707 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00033707
         (679 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA96347.1| transposon protein, putative, CACTA, En/Spm sub-c...    44   1e-05

>gb|ABA96347.1| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa
           Japonica Group]
          Length = 572

 Score = 44.3 bits (103), Expect(2) = 1e-05
 Identities = 22/62 (35%), Positives = 34/62 (54%)
 Frame = +3

Query: 357 AVKIRFKIDFGHENVENHYKTFKAHYVEIKKARELGNAGWDNASKTITLDPIVALTFIEA 536
           AV  RF      E ++NH KT++  + +I + R++  AGWD  +  ITLD      +IE 
Sbjct: 344 AVNKRFNSTLTGEQIKNHLKTWQRKFTKINRLRKVSAAGWDEKNFIITLDDEHYNGYIED 403

Query: 537 HR 542
           H+
Sbjct: 404 HK 405



 Score = 30.8 bits (68), Expect(2) = 1e-05
 Identities = 16/42 (38%), Positives = 19/42 (45%)
 Frame = +2

Query: 554 FINKPIEHYEGLRIICGDDNATGLYMTSIFSDFGDRFENEEN 679
           + NKP+ HY  +  I G   ATG Y     S  G     EEN
Sbjct: 410 YFNKPLAHYGEMLTIFGSTMATGKYAKDSSSVLGTEDVQEEN 451


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