BLASTX nr result

ID: Dioscorea21_contig00033685 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00033685
         (241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264125.1| PREDICTED: KH domain-containing protein At4g...   108   6e-22
ref|XP_003578365.1| PREDICTED: poly(rC)-binding protein 2-like [...   107   1e-21
gb|EEE69986.1| hypothetical protein OsJ_29891 [Oryza sativa Japo...   104   9e-21
gb|EEC84819.1| hypothetical protein OsI_31905 [Oryza sativa Indi...   104   9e-21
ref|NP_001063567.1| Os09g0498600 [Oryza sativa Japonica Group] g...   104   9e-21

>ref|XP_002264125.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
           gi|297735779|emb|CBI18466.3| unnamed protein product
           [Vitis vinifera]
          Length = 704

 Score =  108 bits (269), Expect = 6e-22
 Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 1/80 (1%)
 Frame = -3

Query: 239 VIVVSARENSEFKHSPAQDGVLRIFSRLSEMDMG-SSTLSARLLVHSQQIGCLLGKGGAI 63
           V+V+SAREN E KHSPAQD V+R+  R++E+     + + ARLLVHSQQIGCLLGKGG I
Sbjct: 374 VVVISARENLEQKHSPAQDAVIRVHCRIAEIGFEPGAAVVARLLVHSQQIGCLLGKGGII 433

Query: 62  ISEMRRATGANIRIFLKEQV 3
           ISEMRRATGA+IRIF KEQV
Sbjct: 434 ISEMRRATGASIRIFAKEQV 453



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/76 (35%), Positives = 47/76 (61%), Gaps = 11/76 (14%)
 Frame = -3

Query: 197 SPAQDGVLRIFSRLSEMD-----------MGSSTLSARLLVHSQQIGCLLGKGGAIISEM 51
           SPAQ  ++R+F R+ ++D           +G+  +  RLL  S Q+GC+LG+GG I+ ++
Sbjct: 149 SPAQQALVRVFERILKVDEEREEKEKKEDLGNVAVCCRLLAPSNQVGCVLGRGGKIVEKI 208

Query: 50  RRATGANIRIFLKEQV 3
           R+ +GA IR+  K+ +
Sbjct: 209 RQESGAQIRVLPKDHI 224


>ref|XP_003578365.1| PREDICTED: poly(rC)-binding protein 2-like [Brachypodium
           distachyon]
          Length = 629

 Score =  107 bits (266), Expect = 1e-21
 Identities = 56/80 (70%), Positives = 65/80 (81%), Gaps = 1/80 (1%)
 Frame = -3

Query: 239 VIVVSARENSEFKHSPAQDGVLRIFSRLSEMDMG-SSTLSARLLVHSQQIGCLLGKGGAI 63
           VIV+SARENSE  HSPAQD VLR++SR+SE  M  SS + ARLLV SQ IGCLLGKGG+I
Sbjct: 299 VIVISARENSEMMHSPAQDAVLRVYSRISEASMDKSSAVPARLLVPSQHIGCLLGKGGSI 358

Query: 62  ISEMRRATGANIRIFLKEQV 3
           I+EMR  TGA+IRIF  EQ+
Sbjct: 359 IAEMRNVTGASIRIFGNEQI 378


>gb|EEE69986.1| hypothetical protein OsJ_29891 [Oryza sativa Japonica Group]
          Length = 609

 Score =  104 bits (259), Expect = 9e-21
 Identities = 55/80 (68%), Positives = 64/80 (80%), Gaps = 1/80 (1%)
 Frame = -3

Query: 239 VIVVSARENSEFKHSPAQDGVLRIFSRLSEMDMG-SSTLSARLLVHSQQIGCLLGKGGAI 63
           VIV+SA ENSE  HSPAQD VLR+ SR+SE  M  SS ++ARLLV SQ IGCLLGKGG+I
Sbjct: 283 VIVISAHENSEMMHSPAQDAVLRVHSRISESSMDKSSAVTARLLVPSQHIGCLLGKGGSI 342

Query: 62  ISEMRRATGANIRIFLKEQV 3
           I+EMR+ TGA IRIF  EQ+
Sbjct: 343 IAEMRKITGAGIRIFGNEQI 362


>gb|EEC84819.1| hypothetical protein OsI_31905 [Oryza sativa Indica Group]
          Length = 617

 Score =  104 bits (259), Expect = 9e-21
 Identities = 55/80 (68%), Positives = 64/80 (80%), Gaps = 1/80 (1%)
 Frame = -3

Query: 239 VIVVSARENSEFKHSPAQDGVLRIFSRLSEMDMG-SSTLSARLLVHSQQIGCLLGKGGAI 63
           VIV+SA ENSE  HSPAQD VLR+ SR+SE  M  SS ++ARLLV SQ IGCLLGKGG+I
Sbjct: 291 VIVISAHENSEMMHSPAQDAVLRVHSRISESSMDKSSAVTARLLVPSQHIGCLLGKGGSI 350

Query: 62  ISEMRRATGANIRIFLKEQV 3
           I+EMR+ TGA IRIF  EQ+
Sbjct: 351 IAEMRKITGAGIRIFGNEQI 370


>ref|NP_001063567.1| Os09g0498600 [Oryza sativa Japonica Group]
           gi|113631800|dbj|BAF25481.1| Os09g0498600 [Oryza sativa
           Japonica Group] gi|215695028|dbj|BAG90219.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 398

 Score =  104 bits (259), Expect = 9e-21
 Identities = 55/80 (68%), Positives = 64/80 (80%), Gaps = 1/80 (1%)
 Frame = -3

Query: 239 VIVVSARENSEFKHSPAQDGVLRIFSRLSEMDMG-SSTLSARLLVHSQQIGCLLGKGGAI 63
           VIV+SA ENSE  HSPAQD VLR+ SR+SE  M  SS ++ARLLV SQ IGCLLGKGG+I
Sbjct: 72  VIVISAHENSEMMHSPAQDAVLRVHSRISESSMDKSSAVTARLLVPSQHIGCLLGKGGSI 131

Query: 62  ISEMRRATGANIRIFLKEQV 3
           I+EMR+ TGA IRIF  EQ+
Sbjct: 132 IAEMRKITGAGIRIFGNEQI 151