BLASTX nr result

ID: Dioscorea21_contig00033681 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00033681
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [S...   121   7e-26
ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containi...   120   9e-26
emb|CBI14948.3| unnamed protein product [Vitis vinifera]              118   6e-25
ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containi...   118   6e-25
gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]        116   2e-24

>ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
           gi|241939236|gb|EES12381.1| hypothetical protein
           SORBIDRAFT_06g020256 [Sorghum bicolor]
          Length = 693

 Score =  121 bits (303), Expect = 7e-26
 Identities = 53/65 (81%), Positives = 59/65 (90%)
 Frame = +2

Query: 2   LAIAFGLIKSQPGSVIRVSKNLRVCTDCHLATKLISKVYQRDIIVRDRNRFHHFRDGDCS 181
           LAIAFGL+K  PG+ IR+SKNLRVCTDCH ATKLISKVY R+I+VRDRNRFHHF+DG CS
Sbjct: 629 LAIAFGLMKLDPGATIRLSKNLRVCTDCHSATKLISKVYNREIVVRDRNRFHHFKDGTCS 688

Query: 182 CNDYW 196
           CNDYW
Sbjct: 689 CNDYW 693


>ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like, partial [Brachypodium distachyon]
          Length = 745

 Score =  120 bits (302), Expect = 9e-26
 Identities = 54/65 (83%), Positives = 60/65 (92%)
 Frame = +2

Query: 2   LAIAFGLIKSQPGSVIRVSKNLRVCTDCHLATKLISKVYQRDIIVRDRNRFHHFRDGDCS 181
           LAIAFGL+KS+PG+ IR+SKNLRVC DCH ATKLISKVY R+IIVRDRNRFHHF+DG CS
Sbjct: 681 LAIAFGLMKSRPGATIRLSKNLRVCIDCHSATKLISKVYNREIIVRDRNRFHHFKDGLCS 740

Query: 182 CNDYW 196
           CNDYW
Sbjct: 741 CNDYW 745


>emb|CBI14948.3| unnamed protein product [Vitis vinifera]
          Length = 401

 Score =  118 bits (295), Expect = 6e-25
 Identities = 50/65 (76%), Positives = 59/65 (90%)
 Frame = +2

Query: 2   LAIAFGLIKSQPGSVIRVSKNLRVCTDCHLATKLISKVYQRDIIVRDRNRFHHFRDGDCS 181
           LAIAFGLIKS PG+ IR++KNLRVCTDCH ATKL+SKV+ R+I+VRDR RFHHF++G CS
Sbjct: 337 LAIAFGLIKSPPGTTIRITKNLRVCTDCHNATKLVSKVFNREIVVRDRTRFHHFKEGSCS 396

Query: 182 CNDYW 196
           CNDYW
Sbjct: 397 CNDYW 401


>ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
           [Vitis vinifera]
          Length = 698

 Score =  118 bits (295), Expect = 6e-25
 Identities = 50/65 (76%), Positives = 59/65 (90%)
 Frame = +2

Query: 2   LAIAFGLIKSQPGSVIRVSKNLRVCTDCHLATKLISKVYQRDIIVRDRNRFHHFRDGDCS 181
           LAIAFGLIKS PG+ IR++KNLRVCTDCH ATKL+SKV+ R+I+VRDR RFHHF++G CS
Sbjct: 634 LAIAFGLIKSPPGTTIRITKNLRVCTDCHNATKLVSKVFNREIVVRDRTRFHHFKEGSCS 693

Query: 182 CNDYW 196
           CNDYW
Sbjct: 694 CNDYW 698


>gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
          Length = 694

 Score =  116 bits (290), Expect = 2e-24
 Identities = 51/65 (78%), Positives = 57/65 (87%)
 Frame = +2

Query: 2   LAIAFGLIKSQPGSVIRVSKNLRVCTDCHLATKLISKVYQRDIIVRDRNRFHHFRDGDCS 181
           LAIAFGL+K  PG+ IR+SKNLRVC DCH ATKLISKVY R+I+VRDRN FHHF+DG CS
Sbjct: 630 LAIAFGLMKLDPGATIRLSKNLRVCADCHSATKLISKVYDREIVVRDRNIFHHFKDGTCS 689

Query: 182 CNDYW 196
           CNDYW
Sbjct: 690 CNDYW 694


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