BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00033680
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002608392.1| PSII T-protein [Vitis vinifera] gi|209954189...   105   4e-21
ref|YP_654232.1| photosystem II protein N [Oryza sativa Indica G...    92   6e-17
ref|YP_001294380.1| photosystem II protein N [Dioscorea elephant...    89   3e-16
gb|ADD63122.1| photosystem II protein N [Microlaena stipoides]         89   4e-16
gb|ADZ93600.1| photosystem II subunit N [Prionium serratum] gi|3...    87   1e-15

>ref|YP_002608392.1| PSII T-protein [Vitis vinifera] gi|209954189|emb|CAQ77647.1| PSII
           T-protein [Vitis vinifera] gi|239764735|gb|ACS15206.1|
           PSII T protein [Vitis vinifera]
          Length = 66

 Score =  105 bits (262), Expect = 4e-21
 Identities = 56/67 (83%), Positives = 56/67 (83%)
 Frame = +2

Query: 104 MEALVYTFLLVSTLGIIFFAIFFREPPKVPTKKMK*FFITLIEVMSPRQYWRGSLLQLVP 283
           MEALVYTFLLVSTLGIIFFAIFFREPPK  TKKMK FFI  I VMSP   W GSLLQLVP
Sbjct: 1   MEALVYTFLLVSTLGIIFFAIFFREPPKEKTKKMKFFFIISISVMSP-PIWGGSLLQLVP 59

Query: 284 VFFEWIS 304
           VF EWIS
Sbjct: 60  VFLEWIS 66


>ref|YP_654232.1| photosystem II protein N [Oryza sativa Indica Group]
           gi|42795505|gb|AAS46072.1| photosystem II protein N
           [Oryza sativa Indica Group] gi|42795572|gb|AAS46138.1|
           photosystem II protein N [Oryza sativa Japonica Group]
           gi|42795636|gb|AAS46201.1| photosystem II protein N
           [Oryza sativa Japonica Group]
           gi|290790592|gb|ADD62852.1| photosystem II protein N
           [Oryza sativa Japonica Group]
           gi|290790661|gb|ADD62920.1| photosystem II protein N
           [Oryza meridionalis] gi|290790730|gb|ADD62988.1|
           photosystem II protein N [Oryza australiensis]
          Length = 97

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 42/54 (77%), Positives = 44/54 (81%)
 Frame = -2

Query: 422 LKLSKNGNSNPSHHLHIWFTCKLYWIRFIYRLWPTFSTTKRSIRRTRGLIEVMS 261
           LK  KNGNSN S HLHIWFTCKLYW+  IYR+W T ST KRSIRRTRGLIEV S
Sbjct: 34  LKFYKNGNSNFSRHLHIWFTCKLYWVCLIYRVWATLSTIKRSIRRTRGLIEVRS 87


>ref|YP_001294380.1| photosystem II protein N [Dioscorea elephantipes]
           gi|29336942|sp|Q9GF93.1|PSBN_DIOBU RecName: Full=Protein
           PsbN gi|223635673|sp|A6MMN5.1|PSBN_DIOEL RecName:
           Full=Protein PsbN gi|11023016|gb|AAG26275.1| photosystem
           II subunit [Dioscorea bulbifera]
           gi|148668073|gb|ABR01457.1| photosystem II protein N
           [Dioscorea elephantipes]
          Length = 43

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 43/43 (100%), Positives = 43/43 (100%)
 Frame = -3

Query: 406 METATLVTIFISGLLVSFTGYALYIAFGQPSQQLRDPFEEHGD 278
           METATLVTIFISGLLVSFTGYALYIAFGQPSQQLRDPFEEHGD
Sbjct: 1   METATLVTIFISGLLVSFTGYALYIAFGQPSQQLRDPFEEHGD 43


>gb|ADD63122.1| photosystem II protein N [Microlaena stipoides]
          Length = 97

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 40/54 (74%), Positives = 44/54 (81%)
 Frame = -2

Query: 422 LKLSKNGNSNPSHHLHIWFTCKLYWIRFIYRLWPTFSTTKRSIRRTRGLIEVMS 261
           LK  KNGNSN S HLHIWFTCKLYW+  IYR+W T ST KRSIRRTRGL++V S
Sbjct: 34  LKFYKNGNSNFSRHLHIWFTCKLYWVCLIYRVWATLSTIKRSIRRTRGLMKVRS 87


>gb|ADZ93600.1| photosystem II subunit N [Prionium serratum]
           gi|335059986|gb|AEH27252.1| photosystem II subunit N
           [Acanthus montanus]
          Length = 43

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/43 (97%), Positives = 42/43 (97%)
 Frame = -3

Query: 406 METATLVTIFISGLLVSFTGYALYIAFGQPSQQLRDPFEEHGD 278
           METATLV IFISGLLVSFTGYALYIAFGQPSQQLRDPFEEHGD
Sbjct: 1   METATLVAIFISGLLVSFTGYALYIAFGQPSQQLRDPFEEHGD 43