BLASTX nr result

ID: Dioscorea21_contig00033643 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00033643
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]   110   1e-22
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]   110   1e-22
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ...   109   2e-22
emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]   108   4e-22
gb|ABW74566.1| integrase [Boechera divaricarpa]                       108   6e-22

>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
          Length = 1274

 Score =  110 bits (275), Expect = 1e-22
 Identities = 50/91 (54%), Positives = 65/91 (71%)
 Frame = +1

Query: 1   KQSRNPFPSGVPRRTQACLQLVHMDLCGPMSEDSLGGNKFFFLLVDDYSRWSTVYLLKNK 180
           KQS+ PFP G  RR  +CL+++H DLCGPM   S GG+++F L  DD+SR S VY L++K
Sbjct: 480 KQSKKPFPKGRSRRASSCLEIIHADLCGPMQTASFGGSRYFLLFTDDHSRMSWVYFLQSK 539

Query: 181 SEAFAKFKLFHASVERQKGVKLKVLRSDRGG 273
           +E F  FK F A VE+Q G  +KVLR+DRGG
Sbjct: 540 AETFETFKKFKAFVEKQSGKCIKVLRTDRGG 570


>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
          Length = 1472

 Score =  110 bits (275), Expect = 1e-22
 Identities = 50/91 (54%), Positives = 65/91 (71%)
 Frame = +1

Query: 1   KQSRNPFPSGVPRRTQACLQLVHMDLCGPMSEDSLGGNKFFFLLVDDYSRWSTVYLLKNK 180
           KQS+ PFP G  RR  +CL+++H DLCGPM   S GG+++F L  DD+SR S VY L++K
Sbjct: 465 KQSKKPFPKGRSRRASSCLEIIHADLCGPMQTASFGGSRYFLLFTDDHSRMSWVYFLQSK 524

Query: 181 SEAFAKFKLFHASVERQKGVKLKVLRSDRGG 273
           +E F  FK F A VE+Q G  +KVLR+DRGG
Sbjct: 525 AETFETFKKFKAFVEKQSGKCIKVLRTDRGG 555


>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1333

 Score =  109 bits (273), Expect = 2e-22
 Identities = 53/91 (58%), Positives = 63/91 (69%)
 Frame = +1

Query: 1   KQSRNPFPSGVPRRTQACLQLVHMDLCGPMSEDSLGGNKFFFLLVDDYSRWSTVYLLKNK 180
           KQ+R  FP G   R   CL+LVH DLCGPM  +SLGG+++F +  DDYSR+S VY LK K
Sbjct: 485 KQTRKSFPVGKSWRATTCLELVHADLCGPMKMESLGGSRYFLMFTDDYSRFSWVYFLKFK 544

Query: 181 SEAFAKFKLFHASVERQKGVKLKVLRSDRGG 273
           SE F  FK F A VE Q G K+K LR+DRGG
Sbjct: 545 SETFETFKKFKAFVENQSGNKIKSLRTDRGG 575


>emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]
          Length = 1183

 Score =  108 bits (270), Expect = 4e-22
 Identities = 49/91 (53%), Positives = 65/91 (71%)
 Frame = +1

Query: 1   KQSRNPFPSGVPRRTQACLQLVHMDLCGPMSEDSLGGNKFFFLLVDDYSRWSTVYLLKNK 180
           KQS+ PFP G  RR  +CL+++H DLCGPM   S GG+++F L  +D+SR S VY L++K
Sbjct: 414 KQSKKPFPKGRSRRASSCLEIIHADLCGPMQTASFGGSRYFLLFTNDHSRMSWVYFLQSK 473

Query: 181 SEAFAKFKLFHASVERQKGVKLKVLRSDRGG 273
           +E F  FK F A VE+Q G  +KVLR+DRGG
Sbjct: 474 AETFETFKKFKAFVEKQSGKCIKVLRTDRGG 504


>gb|ABW74566.1| integrase [Boechera divaricarpa]
          Length = 1165

 Score =  108 bits (269), Expect = 6e-22
 Identities = 54/91 (59%), Positives = 64/91 (70%)
 Frame = +1

Query: 1   KQSRNPFPSGVPRRTQACLQLVHMDLCGPMSEDSLGGNKFFFLLVDDYSRWSTVYLLKNK 180
           KQSR  FP G  RR    L++VH DLCGPM   SLGG+K+F +L DDYSR S VY LK+K
Sbjct: 321 KQSRRSFPVGRARRATQYLEIVHADLCGPMQTASLGGSKYFLMLTDDYSRMSWVYFLKSK 380

Query: 181 SEAFAKFKLFHASVERQKGVKLKVLRSDRGG 273
            EAF  FK F A VE+Q   ++KVLR+DRGG
Sbjct: 381 GEAFDMFKNFKALVEKQSEQQVKVLRTDRGG 411


Top