BLASTX nr result

ID: Dioscorea21_contig00033629 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00033629
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAC79783.2| putative pre-rRNA processing protein RRP5 [Oryza...   162   3e-38
gb|EEE66766.1| hypothetical protein OsJ_23484 [Oryza sativa Japo...   162   3e-38
gb|EEC81702.1| hypothetical protein OsI_25303 [Oryza sativa Indi...   162   3e-38
emb|CBI29966.3| unnamed protein product [Vitis vinifera]              158   5e-37
ref|XP_002276633.2| PREDICTED: protein RRP5 homolog [Vitis vinif...   156   1e-36

>dbj|BAC79783.2| putative pre-rRNA processing protein RRP5 [Oryza sativa Japonica
           Group] gi|50508626|dbj|BAD31015.1| putative pre-rRNA
           processing protein RRP5 [Oryza sativa Japonica Group]
          Length = 1668

 Score =  162 bits (410), Expect = 3e-38
 Identities = 78/110 (70%), Positives = 91/110 (82%)
 Frame = +1

Query: 1   FLPRSCLDGGKATVGQLIQGVVKSIDKARAVVHLDSDPDLVSKSVIKDLKGLSIDQLVPG 180
           F+P++  +  K   GQLIQ VVK+IDKAR +VHL SD DL+SKS+IKDLKGLSID L+PG
Sbjct: 68  FMPKADRESAKIESGQLIQCVVKAIDKAREIVHLSSDEDLLSKSIIKDLKGLSIDHLIPG 127

Query: 181 MMVNARVHSTLENGIMLSFLTYFTGTVDVFHLQDYFPSSSWKDDYKHNKK 330
           MMVNARVHS LENG+MLSFLTYFTGT D+F+L + FPS SWKDDY  NKK
Sbjct: 128 MMVNARVHSVLENGVMLSFLTYFTGTADIFNLSNSFPSGSWKDDYIKNKK 177


>gb|EEE66766.1| hypothetical protein OsJ_23484 [Oryza sativa Japonica Group]
          Length = 1898

 Score =  162 bits (410), Expect = 3e-38
 Identities = 78/110 (70%), Positives = 91/110 (82%)
 Frame = +1

Query: 1   FLPRSCLDGGKATVGQLIQGVVKSIDKARAVVHLDSDPDLVSKSVIKDLKGLSIDQLVPG 180
           F+P++  +  K   GQLIQ VVK+IDKAR +VHL SD DL+SKS+IKDLKGLSID L+PG
Sbjct: 267 FMPKADRESAKIESGQLIQCVVKAIDKAREIVHLSSDEDLLSKSIIKDLKGLSIDHLIPG 326

Query: 181 MMVNARVHSTLENGIMLSFLTYFTGTVDVFHLQDYFPSSSWKDDYKHNKK 330
           MMVNARVHS LENG+MLSFLTYFTGT D+F+L + FPS SWKDDY  NKK
Sbjct: 327 MMVNARVHSVLENGVMLSFLTYFTGTADIFNLSNSFPSGSWKDDYIKNKK 376


>gb|EEC81702.1| hypothetical protein OsI_25303 [Oryza sativa Indica Group]
          Length = 1848

 Score =  162 bits (410), Expect = 3e-38
 Identities = 78/110 (70%), Positives = 91/110 (82%)
 Frame = +1

Query: 1   FLPRSCLDGGKATVGQLIQGVVKSIDKARAVVHLDSDPDLVSKSVIKDLKGLSIDQLVPG 180
           F+P++  +  K   GQLIQ VVK+IDKAR +VHL SD DL+SKS+IKDLKGLSID L+PG
Sbjct: 267 FMPKADRESAKIESGQLIQCVVKAIDKAREIVHLSSDEDLLSKSIIKDLKGLSIDHLIPG 326

Query: 181 MMVNARVHSTLENGIMLSFLTYFTGTVDVFHLQDYFPSSSWKDDYKHNKK 330
           MMVNARVHS LENG+MLSFLTYFTGT D+F+L + FPS SWKDDY  NKK
Sbjct: 327 MMVNARVHSVLENGVMLSFLTYFTGTADIFNLSNSFPSGSWKDDYIKNKK 376


>emb|CBI29966.3| unnamed protein product [Vitis vinifera]
          Length = 1862

 Score =  158 bits (399), Expect = 5e-37
 Identities = 76/111 (68%), Positives = 90/111 (81%), Gaps = 1/111 (0%)
 Frame = +1

Query: 1   FLPRSC-LDGGKATVGQLIQGVVKSIDKARAVVHLDSDPDLVSKSVIKDLKGLSIDQLVP 177
           FLP+S   +  +   GQ++QGV++SIDKA  VV+L SDPD +SK V KDLKG+SID L+P
Sbjct: 257 FLPKSSQAENIEINTGQILQGVIRSIDKAHKVVYLSSDPDTISKCVTKDLKGISIDLLIP 316

Query: 178 GMMVNARVHSTLENGIMLSFLTYFTGTVDVFHLQDYFPSSSWKDDYKHNKK 330
           GMMVNARV ST ENG+MLSFLTYFTGTVD+FHLQ  FPSS+WKDDY  NKK
Sbjct: 317 GMMVNARVQSTFENGVMLSFLTYFTGTVDIFHLQTTFPSSNWKDDYNQNKK 367


>ref|XP_002276633.2| PREDICTED: protein RRP5 homolog [Vitis vinifera]
          Length = 1879

 Score =  156 bits (395), Expect = 1e-36
 Identities = 76/112 (67%), Positives = 89/112 (79%), Gaps = 2/112 (1%)
 Frame = +1

Query: 1   FLPRSCLDGGKATV--GQLIQGVVKSIDKARAVVHLDSDPDLVSKSVIKDLKGLSIDQLV 174
           FLP+S        +  GQ++QGV++SIDKA  VV+L SDPD +SK V KDLKG+SID L+
Sbjct: 257 FLPKSSQADQNIEINTGQILQGVIRSIDKAHKVVYLSSDPDTISKCVTKDLKGISIDLLI 316

Query: 175 PGMMVNARVHSTLENGIMLSFLTYFTGTVDVFHLQDYFPSSSWKDDYKHNKK 330
           PGMMVNARV ST ENG+MLSFLTYFTGTVD+FHLQ  FPSS+WKDDY  NKK
Sbjct: 317 PGMMVNARVQSTFENGVMLSFLTYFTGTVDIFHLQTTFPSSNWKDDYNQNKK 368


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