BLASTX nr result

ID: Dioscorea21_contig00033575 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00033575
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545224.1| PREDICTED: sister chromatid cohesion 1 prote...    89   1e-22
ref|XP_003518432.1| PREDICTED: sister chromatid cohesion 1 prote...    87   4e-22
ref|XP_003567820.1| PREDICTED: sister chromatid cohesion 1 prote...    85   2e-21
ref|XP_003567819.1| PREDICTED: sister chromatid cohesion 1 prote...    85   2e-21
ref|NP_001105829.1| absence of first division1 [Zea mays] gi|602...    85   2e-21

>ref|XP_003545224.1| PREDICTED: sister chromatid cohesion 1 protein 1-like [Glycine max]
          Length = 520

 Score = 88.6 bits (218), Expect(2) = 1e-22
 Identities = 43/48 (89%), Positives = 46/48 (95%)
 Frame = +1

Query: 142 NQRKLDKLNIIKICEEILNPSVPMALRFSGILIGGVVIVYERKVKLRY 285
           N+RKLDKLNIIKICEEILNPS+PMALR SGIL+GGVVIVYERKVKL Y
Sbjct: 28  NRRKLDKLNIIKICEEILNPSIPMALRLSGILMGGVVIVYERKVKLLY 75



 Score = 42.7 bits (99), Expect(2) = 1e-22
 Identities = 18/19 (94%), Positives = 19/19 (100%)
 Frame = +2

Query: 83  MFYSHQLLARKAPLGKIWM 139
           MFYSHQLLARKAPLG+IWM
Sbjct: 1   MFYSHQLLARKAPLGQIWM 19


>ref|XP_003518432.1| PREDICTED: sister chromatid cohesion 1 protein 1-like [Glycine max]
          Length = 623

 Score = 86.7 bits (213), Expect(2) = 4e-22
 Identities = 42/48 (87%), Positives = 45/48 (93%)
 Frame = +1

Query: 142 NQRKLDKLNIIKICEEILNPSVPMALRFSGILIGGVVIVYERKVKLRY 285
           N+RKLDKLNII ICEEILNPS+PMALR SGIL+GGVVIVYERKVKL Y
Sbjct: 28  NRRKLDKLNIINICEEILNPSIPMALRLSGILMGGVVIVYERKVKLLY 75



 Score = 42.7 bits (99), Expect(2) = 4e-22
 Identities = 18/19 (94%), Positives = 19/19 (100%)
 Frame = +2

Query: 83  MFYSHQLLARKAPLGKIWM 139
           MFYSHQLLARKAPLG+IWM
Sbjct: 1   MFYSHQLLARKAPLGQIWM 19


>ref|XP_003567820.1| PREDICTED: sister chromatid cohesion 1 protein 1-like isoform 2
           [Brachypodium distachyon]
          Length = 611

 Score = 84.7 bits (208), Expect(2) = 2e-21
 Identities = 41/48 (85%), Positives = 46/48 (95%)
 Frame = +1

Query: 142 NQRKLDKLNIIKICEEILNPSVPMALRFSGILIGGVVIVYERKVKLRY 285
           N+++LDKL+IIKICEEILNPSVPMALR SGIL+GGVVIVYERKVKL Y
Sbjct: 28  NRKRLDKLDIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKLLY 75



 Score = 42.7 bits (99), Expect(2) = 2e-21
 Identities = 18/19 (94%), Positives = 19/19 (100%)
 Frame = +2

Query: 83  MFYSHQLLARKAPLGKIWM 139
           MFYSHQLLARKAPLG+IWM
Sbjct: 1   MFYSHQLLARKAPLGQIWM 19


>ref|XP_003567819.1| PREDICTED: sister chromatid cohesion 1 protein 1-like isoform 1
           [Brachypodium distachyon]
          Length = 603

 Score = 84.7 bits (208), Expect(2) = 2e-21
 Identities = 41/48 (85%), Positives = 46/48 (95%)
 Frame = +1

Query: 142 NQRKLDKLNIIKICEEILNPSVPMALRFSGILIGGVVIVYERKVKLRY 285
           N+++LDKL+IIKICEEILNPSVPMALR SGIL+GGVVIVYERKVKL Y
Sbjct: 28  NRKRLDKLDIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKLLY 75



 Score = 42.7 bits (99), Expect(2) = 2e-21
 Identities = 18/19 (94%), Positives = 19/19 (100%)
 Frame = +2

Query: 83  MFYSHQLLARKAPLGKIWM 139
           MFYSHQLLARKAPLG+IWM
Sbjct: 1   MFYSHQLLARKAPLGQIWM 19


>ref|NP_001105829.1| absence of first division1 [Zea mays] gi|60202505|gb|AAX14638.1|
           cohesion protein [Zea mays] gi|413946677|gb|AFW79326.1|
           absence of first division1 [Zea mays]
          Length = 602

 Score = 84.7 bits (208), Expect(2) = 2e-21
 Identities = 41/48 (85%), Positives = 46/48 (95%)
 Frame = +1

Query: 142 NQRKLDKLNIIKICEEILNPSVPMALRFSGILIGGVVIVYERKVKLRY 285
           N+++LDKL+IIKICEEILNPSVPMALR SGIL+GGVVIVYERKVKL Y
Sbjct: 28  NRKRLDKLDIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKLLY 75



 Score = 42.7 bits (99), Expect(2) = 2e-21
 Identities = 18/19 (94%), Positives = 19/19 (100%)
 Frame = +2

Query: 83  MFYSHQLLARKAPLGKIWM 139
           MFYSHQLLARKAPLG+IWM
Sbjct: 1   MFYSHQLLARKAPLGQIWM 19


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