BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00033550
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546327.1| PREDICTED: DNA-directed RNA polymerase II su...   206   1e-51
ref|XP_002276956.1| PREDICTED: DNA-directed RNA polymerase II su...   206   2e-51
ref|NP_001235803.1| uncharacterized protein LOC100305979 [Glycin...   205   3e-51
ref|XP_004134242.1| PREDICTED: DNA-directed RNA polymerase II su...   205   4e-51
ref|XP_002312337.1| predicted protein [Populus trichocarpa] gi|2...   205   4e-51

>ref|XP_003546327.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like
           [Glycine max]
          Length = 114

 Score =  206 bits (525), Expect = 1e-51
 Identities = 89/106 (83%), Positives = 102/106 (96%)
 Frame = +3

Query: 3   ECNNILYPKENKEQKILLFACRNCEHQEISNDNCVYRNEVLHSVGERTQVLQDVAADPTL 182
           ECNNILYPKE++EQK+LLFACRNC+HQE++++ CVYRNE+ H VGERTQVLQDVAADPTL
Sbjct: 9   ECNNILYPKEDREQKVLLFACRNCDHQEVADNFCVYRNEIQHPVGERTQVLQDVAADPTL 68

Query: 183 PRTKTIRCTKCNHPEAVFFQATARGEEGMTLFFVCCNPSCGHRWRD 320
           PRTK++RCT+CNH EAVFFQATARGEEGMTLFFVCCNP+CGHRWRD
Sbjct: 69  PRTKSVRCTQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 114


>ref|XP_002276956.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9 [Vitis
           vinifera] gi|147769002|emb|CAN66735.1| hypothetical
           protein VITISV_024186 [Vitis vinifera]
           gi|296083263|emb|CBI22899.3| unnamed protein product
           [Vitis vinifera]
          Length = 114

 Score =  206 bits (524), Expect = 2e-51
 Identities = 89/106 (83%), Positives = 102/106 (96%)
 Frame = +3

Query: 3   ECNNILYPKENKEQKILLFACRNCEHQEISNDNCVYRNEVLHSVGERTQVLQDVAADPTL 182
           ECNNILYPKE++EQKILL+ACRNC+HQE++ +NCVYRNE+ HSVGERTQVLQDVAADPTL
Sbjct: 9   ECNNILYPKEDREQKILLYACRNCDHQEVAENNCVYRNEIHHSVGERTQVLQDVAADPTL 68

Query: 183 PRTKTIRCTKCNHPEAVFFQATARGEEGMTLFFVCCNPSCGHRWRD 320
           PRTK++RC +CNH EAVFFQATARGEEGMTLFFVCCNP+CG+RWRD
Sbjct: 69  PRTKSVRCAQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGYRWRD 114


>ref|NP_001235803.1| uncharacterized protein LOC100305979 [Glycine max]
           gi|255627167|gb|ACU13928.1| unknown [Glycine max]
          Length = 114

 Score =  205 bits (522), Expect = 3e-51
 Identities = 88/106 (83%), Positives = 103/106 (97%)
 Frame = +3

Query: 3   ECNNILYPKENKEQKILLFACRNCEHQEISNDNCVYRNEVLHSVGERTQVLQDVAADPTL 182
           ECNNILYPKE+++QK+LLFACRNC+HQE++++ CVYRNE+ HSVGERTQVLQDVAADPTL
Sbjct: 9   ECNNILYPKEDRDQKVLLFACRNCDHQEVADNFCVYRNEIHHSVGERTQVLQDVAADPTL 68

Query: 183 PRTKTIRCTKCNHPEAVFFQATARGEEGMTLFFVCCNPSCGHRWRD 320
           PRTK++RC++CNH EAVFFQATARGEEGMTLFFVCCNP+CGHRWRD
Sbjct: 69  PRTKSVRCSQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 114


>ref|XP_004134242.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like
           [Cucumis sativus] gi|449517969|ref|XP_004166016.1|
           PREDICTED: DNA-directed RNA polymerase II subunit
           RPB9-like [Cucumis sativus]
          Length = 114

 Score =  205 bits (521), Expect = 4e-51
 Identities = 87/106 (82%), Positives = 102/106 (96%)
 Frame = +3

Query: 3   ECNNILYPKENKEQKILLFACRNCEHQEISNDNCVYRNEVLHSVGERTQVLQDVAADPTL 182
           ECNNILYPKE++++KILL+ACRNC+HQE++++NCVYRNE+ H+VGERTQVLQDVAADPTL
Sbjct: 9   ECNNILYPKEDRDEKILLYACRNCDHQEVADNNCVYRNEIHHAVGERTQVLQDVAADPTL 68

Query: 183 PRTKTIRCTKCNHPEAVFFQATARGEEGMTLFFVCCNPSCGHRWRD 320
           PRTK +RC +CNH EAVFFQATARGEEGMTLFFVCCNP+CGHRWRD
Sbjct: 69  PRTKAVRCAQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 114


>ref|XP_002312337.1| predicted protein [Populus trichocarpa] gi|222852157|gb|EEE89704.1|
           predicted protein [Populus trichocarpa]
          Length = 114

 Score =  205 bits (521), Expect = 4e-51
 Identities = 89/106 (83%), Positives = 100/106 (94%)
 Frame = +3

Query: 3   ECNNILYPKENKEQKILLFACRNCEHQEISNDNCVYRNEVLHSVGERTQVLQDVAADPTL 182
           ECNNILYP+E+++QKILL+ACRNC+HQEI++DNCVYRNEV HSV ERTQVLQDVAADPTL
Sbjct: 9   ECNNILYPREDRDQKILLYACRNCDHQEIADDNCVYRNEVHHSVAERTQVLQDVAADPTL 68

Query: 183 PRTKTIRCTKCNHPEAVFFQATARGEEGMTLFFVCCNPSCGHRWRD 320
           PRTK + CT C HPEAVFFQAT+RGEEGMTLFFVCCNP+CGHRWRD
Sbjct: 69  PRTKAVTCTVCKHPEAVFFQATSRGEEGMTLFFVCCNPNCGHRWRD 114