BLASTX nr result

ID: Dioscorea21_contig00033546 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00033546
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631232.1| PREDICTED: RING-H2 finger protein ATL47-like...    74   1e-11
emb|CAN82925.1| hypothetical protein VITISV_039591 [Vitis vinifera]    74   1e-11
emb|CBI27119.3| unnamed protein product [Vitis vinifera]               72   5e-11
emb|CAN82924.1| hypothetical protein VITISV_039590 [Vitis vinifera]    72   5e-11
emb|CBI27116.3| unnamed protein product [Vitis vinifera]               70   1e-10

>ref|XP_003631232.1| PREDICTED: RING-H2 finger protein ATL47-like [Vitis vinifera]
           gi|297737916|emb|CBI27117.3| unnamed protein product
           [Vitis vinifera]
          Length = 172

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 37/82 (45%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
 Frame = +2

Query: 80  HFSWQPNSSFLPSHPTKPHDDHHEKLSVIRFKAH--LNEQVESCVFCLCNIEEGEEIREL 253
           H+S  PNS     H    H++  + L++  ++     NE VE C  CLC IEEGEE+REL
Sbjct: 58  HYSLFPNS-----HKINVHENFDQGLNIGLYEPEEGSNEVVE-CAVCLCKIEEGEEVREL 111

Query: 254 RCHHLFHKSCLDGWLEHPHARC 319
           RC H+FH+ CLD WL H +  C
Sbjct: 112 RCGHMFHRDCLDRWLGHRNGTC 133


>emb|CAN82925.1| hypothetical protein VITISV_039591 [Vitis vinifera]
          Length = 322

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 37/82 (45%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
 Frame = +2

Query: 80  HFSWQPNSSFLPSHPTKPHDDHHEKLSVIRFKAH--LNEQVESCVFCLCNIEEGEEIREL 253
           H+S  PNS     H    H++  + L++  ++     NE VE C  CLC IEEGEE+REL
Sbjct: 58  HYSLFPNS-----HKINVHENFDQGLNIGLYEPEEGSNEVVE-CAVCLCKIEEGEEVREL 111

Query: 254 RCHHLFHKSCLDGWLEHPHARC 319
           RC H+FH+ CLD WL H +  C
Sbjct: 112 RCGHMFHRDCLDRWLGHRNGTC 133



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 34/86 (39%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
 Frame = +2

Query: 80  HFSWQPNSSF----LPSHPTKPHDDHHEKLSVIRFKAHLN--EQVESCVFCLCNIEEGEE 241
           HF W  +  F      S+     ++  E+L +  +K  L   E  E C  CLC IEEG+E
Sbjct: 198 HFKWAWSFLFHRFSFASYTLGMLENGEEELRIGHYKVKLGSEESEEECAVCLCKIEEGDE 257

Query: 242 IRELRCHHLFHKSCLDGWLEHPHARC 319
           I +LRC HLFHK CLD W+++  + C
Sbjct: 258 ISDLRCDHLFHKVCLDRWVQYKRSTC 283


>emb|CBI27119.3| unnamed protein product [Vitis vinifera]
          Length = 103

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
 Frame = +2

Query: 149 EKLSVIRFKAHLN-EQVESCVFCLCNIEEGEEIRELRCHHLFHKSCLDGWLEHPHARC 319
           E+ S+ ++K  L  E+ E C  CLC IE GEEIRELRC HLFH+ CLD WL++  A C
Sbjct: 7   EQPSISQYKVKLGCEEGEECAVCLCKIEAGEEIRELRCDHLFHRVCLDRWLQYKRATC 64


>emb|CAN82924.1| hypothetical protein VITISV_039590 [Vitis vinifera]
          Length = 350

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
 Frame = +2

Query: 149 EKLSVIRFKAHLN-EQVESCVFCLCNIEEGEEIRELRCHHLFHKSCLDGWLEHPHARC 319
           E+ S+ ++K  L  E+ E C  CLC IE GEEIRELRC HLFH+ CLD WL++  A C
Sbjct: 70  EQPSISQYKVKLGCEEGEECAVCLCKIEAGEEIRELRCDHLFHRVCLDRWLQYKRATC 127


>emb|CBI27116.3| unnamed protein product [Vitis vinifera]
          Length = 173

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 39/89 (43%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
 Frame = +2

Query: 77  AHFSWQ-----PNSSFLPSHPTK---PHDDHHEKLSVIRFKAHLNEQVESCVFCLCNIEE 232
           AH +W       +S FL SH       + D    L + R +   NE  E C  CLC IEE
Sbjct: 47  AHLTWAWDFLLHHSLFLNSHHNMNVPKNGDQGLGLGLYRPELGSNEVAE-CAVCLCKIEE 105

Query: 233 GEEIRELRCHHLFHKSCLDGWLEHPHARC 319
           GEEIRELRC H+FH+ CLD W+ H +  C
Sbjct: 106 GEEIRELRCDHMFHRDCLDRWVGHRNGTC 134


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