BLASTX nr result

ID: Dioscorea21_contig00033545 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00033545
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003559771.1| PREDICTED: putative RING-H2 finger protein A...    62   6e-08
gb|EAZ05189.1| hypothetical protein OsI_27387 [Oryza sativa Indi...    60   2e-07
dbj|BAJ92167.1| predicted protein [Hordeum vulgare subsp. vulgar...    59   4e-07
ref|NP_001060682.1| Os07g0686300 [Oryza sativa Japonica Group] g...    59   5e-07
gb|ABK24048.1| unknown [Picea sitchensis]                              57   1e-06

>ref|XP_003559771.1| PREDICTED: putative RING-H2 finger protein ATL50-like [Brachypodium
           distachyon]
          Length = 188

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/62 (45%), Positives = 39/62 (62%)
 Frame = -3

Query: 321 RELRCHHLFHKSCMDGWLEHPHARCPLCRASLVSLDSTKFKVEDMDDDQELGTSIVPFVA 142
           REL C H+FH++C+D WL  P A CPLCRA L S  + +    D D ++E  + +V  +A
Sbjct: 116 RELACRHVFHRACLDAWLARPPATCPLCRARLSSAATPE---SDSDWEEEADSDLVLLMA 172

Query: 141 YV 136
           YV
Sbjct: 173 YV 174


>gb|EAZ05189.1| hypothetical protein OsI_27387 [Oryza sativa Indica Group]
          Length = 181

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
 Frame = -3

Query: 321 RELRCHHLFHKSCMDGW--LEHPHARCPLCRASLVSLDSTKFKVEDMDDDQELGTSIVPF 148
           RELRC HLFH+ C+D W     P A CPLCR  L+   S     +D D +++  + +V F
Sbjct: 111 RELRCRHLFHRGCLDRWWLSARPPATCPLCRCRLLQSPSAAADDDDGDGEEDSDSDMVMF 170

Query: 147 VAYVHNA 127
           +AY+ ++
Sbjct: 171 MAYLRSS 177


>dbj|BAJ92167.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326516402|dbj|BAJ92356.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 193

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 23/49 (46%), Positives = 30/49 (61%)
 Frame = -3

Query: 321 RELRCHHLFHKSCMDGWLEHPHARCPLCRASLVSLDSTKFKVEDMDDDQ 175
           RELRC H+FH+ C+D WL  P A CPLCR  L+     +     +DDD+
Sbjct: 118 RELRCRHVFHRECLDSWLLRPRATCPLCRDRLLPCQPPRACARALDDDE 166


>ref|NP_001060682.1| Os07g0686300 [Oryza sativa Japonica Group]
           gi|22324426|dbj|BAC10343.1| unknown protein [Oryza
           sativa Japonica Group] gi|50509143|dbj|BAD30283.1|
           unknown protein [Oryza sativa Japonica Group]
           gi|113612218|dbj|BAF22596.1| Os07g0686300 [Oryza sativa
           Japonica Group] gi|215692974|dbj|BAG88394.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 181

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
 Frame = -3

Query: 321 RELRCHHLFHKSCMDGW--LEHPHARCPLCRASLVSLDSTKFKVEDMDDDQELGTSIVPF 148
           RELRC HLFH+ C+D W     P A CPLCR  L+   S      D D +++  + +V F
Sbjct: 111 RELRCRHLFHRGCLDRWWLSARPPATCPLCRCRLLQSPSAAADDGDGDGEEDSDSDMVMF 170

Query: 147 VAYVHNA 127
           +AY+ ++
Sbjct: 171 MAYLRSS 177


>gb|ABK24048.1| unknown [Picea sitchensis]
          Length = 189

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
 Frame = -3

Query: 321 RELRCHHLFHKSCMDGWLEHPHARCPLCRASLVSLDSTK---FKVEDMDDDQELGTSIVP 151
           R+L C HLFH+ C+D WL+H    CPLCR+ L+S ++ K    + +++ D+     S   
Sbjct: 119 RQLTCCHLFHRPCLDKWLDHQQITCPLCRSCLISEEAAKNIRLREQELTDESVFWCSSFQ 178

Query: 150 FVAYVH 133
             AY H
Sbjct: 179 EAAYHH 184