BLASTX nr result

ID: Dioscorea21_contig00033540 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00033540
         (605 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]              70   4e-10
ref|XP_003521972.1| PREDICTED: uncharacterized protein LOC100800...    69   8e-10
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...    69   8e-10
ref|XP_003553268.1| PREDICTED: putative ribonuclease H protein A...    67   2e-09
gb|AEL30350.1| RNA-directed DNA polymerase [Arachis hypogaea]          66   4e-09

>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
          Length = 1898

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 56/231 (24%), Positives = 96/231 (41%), Gaps = 31/231 (13%)
 Frame = -3

Query: 600  RKFLWANFDHDKGMAMVNWDTITSSKSEGGLGIRNLLKVKHSLMAKNLFKYLNRHNTFWV 421
            R FLW +  + + +  VNW  I   ++EGGLG+R       + + K  ++  +  +  WV
Sbjct: 1359 RNFLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWV 1418

Query: 420  DILYLKY-GDHNFWNTLAPSNCSTFFRGLCANANVIKPFLWLNCINPANTSLLYHPWMFD 244
             +L  KY  + +F +  + SNCS  +R +    +V+   +  N  N    +     W+ D
Sbjct: 1419 KVLREKYVKNADFLHLQSQSNCSWGWRSIMKGKDVLAGAIKWNVGNGRKINFWNDWWVGD 1478

Query: 243  IPIAYKPTFVNMDLNMDDLCVHDFTV-DTSWNLDAINTLFGINW-----NSPITSLGRQG 82
             P+A     +N   +M D+ V D T     W+  A++ +  IN       +PI     Q 
Sbjct: 1479 GPLASNTDCINQP-HMTDIKVEDLTTSQRRWDTGALHNILPINMIDMVRATPIAINSEQE 1537

Query: 81   IDPTWV----------------------GWSN--IWKLCVAPKVKTFVWLV 1
              P+W                       G S+  IW+     K+K F+W +
Sbjct: 1538 DFPSWPHSTTGMVTVSSAYSLIAGHDGDGRSHDWIWRATCTEKIKLFMWKI 1588


>ref|XP_003521972.1| PREDICTED: uncharacterized protein LOC100800774 [Glycine max]
          Length = 684

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 35/85 (41%), Positives = 45/85 (52%)
 Frame = -3

Query: 600 RKFLWANFDHDKGMAMVNWDTITSSKSEGGLGIRNLLKVKHSLMAKNLFKYLNRHNTFWV 421
           R FLW        +A VNWDT+   KS+GGLGI++L K   +L+ K  ++  N HN  W 
Sbjct: 230 RNFLWGGGVEAARIAWVNWDTVCLPKSKGGLGIKDLTKFNEALLGKWGWELANNHNQLWA 289

Query: 420 DILYLKYGDHNFWNTLAPSNCSTFF 346
            +L  KYG    WNTL     S  F
Sbjct: 290 RVLLSKYGG---WNTLCSGRDSAHF 311


>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 57/241 (23%), Positives = 99/241 (41%), Gaps = 41/241 (17%)
 Frame = -3

Query: 603  ARKFLWANFDHDKGMAMVNWDTITSSKSEGGLGIRNLLKVKHSLMAKNLFKYLNRHNTFW 424
            +R FLW   +  + + +V W+ I+ SK EGGLGIR++ +   + + K  ++ L   ++ W
Sbjct: 828  SRSFLWGEQEGKRRVHLVAWENISKSKKEGGLGIRSMRQANSAFLVKLGWRLLAEPSSLW 887

Query: 423  VDILYLKYGDHNFWNTL--APSNCSTFFRGLCANANVIKPFLWLNCINPANTSLLYHPWM 250
              IL  KY D+     +    SN S+ +RG+ ++ +V++  +     N A T   +H W 
Sbjct: 888  SRILRAKYCDNRCDIDMFKEKSNASSTWRGILSSIDVVRKGINSAVGNGAKTLFWHHRWA 947

Query: 249  FDIPIAYKPTFVNMDLNMDDLCVHDFTVDTSWNL-------------------------- 148
               P+      +++   +  + + D TV   W+L                          
Sbjct: 948  TSEPL------ISLASPIPPIELQDATVKEMWDLVSGWKVDVFANYLPEATLKLIAAHEL 1001

Query: 147  -DAINTLFGINWN-SP-----------ITSLGRQGIDPTWVGWSNIWKLCVAPKVKTFVW 7
             D    +  I WN SP           IT             WS +WK+    +V+ F+W
Sbjct: 1002 IDDEEAIDDIYWNGSPSGGFTIGSAMNITRNAELANMDAHPKWSAVWKIPTPQRVRFFIW 1061

Query: 6    L 4
            L
Sbjct: 1062 L 1062


>ref|XP_003553268.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 625

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 34/85 (40%), Positives = 45/85 (52%)
 Frame = -3

Query: 600 RKFLWANFDHDKGMAMVNWDTITSSKSEGGLGIRNLLKVKHSLMAKNLFKYLNRHNTFWV 421
           R FLW        +A VNWDT+   KS+GGLGI++L K   +L+ K  ++  N HN  W 
Sbjct: 230 RNFLWGRGVEAARIAWVNWDTVCLPKSKGGLGIKDLTKFNEALLGKWGWELANNHNQLWA 289

Query: 420 DILYLKYGDHNFWNTLAPSNCSTFF 346
            +L  KYG    WNTL     +  F
Sbjct: 290 RVLLSKYGG---WNTLCSGRDNAHF 311


>gb|AEL30350.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 673

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 49/183 (26%), Positives = 81/183 (44%), Gaps = 2/183 (1%)
 Frame = -3

Query: 600 RKFLWANFDHDKGMAMVNWDTITSSKSEGGLGIRNLLKVKHSLMAKNLFKYLNRHNTFWV 421
           R FLW      +G+ +V+W  + + K  GGLGIR+   V  +L+ K ++ +  + N  WV
Sbjct: 156 RNFLWKGQVDGRGLNLVSWKVLVTPKKYGGLGIRDPYCVNIALLGKLVWTFFQQPNKLWV 215

Query: 420 DILYLKYGDHNFWNTLAPSN-CSTFFRGLCANANVIKP-FLWLNCINPANTSLLYHPWMF 247
            +L  KY    +     P N  S  +R LC    V+K  F W  CI   N +  +  W  
Sbjct: 216 QLLDAKYRSSLYDCFSYPKNKDSPIWRCLCKAWKVLKDGFAW--CIGDLNQNFWFSSWRR 273

Query: 246 DIPIAYKPTFVNMDLNMDDLCVHDFTVDTSWNLDAINTLFGINWNSPITSLGRQGIDPTW 67
           +  ++ +  +V+  ++  +L + D      W+LD + +    N    I S          
Sbjct: 274 EGRLSNEMDYVH--ISDSNLRIQDIWSVGRWHLDTLYSPLSQNLKDNILSYNPDEQAGPE 331

Query: 66  VGW 58
           VGW
Sbjct: 332 VGW 334


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