BLASTX nr result

ID: Dioscorea21_contig00033531 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00033531
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533355.1| PREDICTED: pentatricopeptide repeat-containi...   125   4e-27
ref|XP_003622275.1| Pentatricopeptide repeat protein [Medicago t...   122   3e-26
ref|XP_002269228.2| PREDICTED: pentatricopeptide repeat-containi...   107   1e-21
emb|CBI35273.3| unnamed protein product [Vitis vinifera]              107   1e-21
ref|XP_002330082.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21

>ref|XP_003533355.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Glycine max]
          Length = 540

 Score =  125 bits (314), Expect = 4e-27
 Identities = 57/80 (71%), Positives = 66/80 (82%)
 Frame = -1

Query: 248 AHSGMVARGRWCFEAMKRVYMIEPQQQHYACMVDLLGRAGLFAEALKLIGSMPMEADTFV 69
           AHSG+V +GRWCF+ MKRVY IEPQ  HYACMVD+L RA LF E+  LI SMPM+ D +V
Sbjct: 373 AHSGLVEQGRWCFDVMKRVYSIEPQVYHYACMVDILSRARLFDESEILIRSMPMKPDVYV 432

Query: 68  WGALLGACRMHGNVELGERV 9
           WGALLG C+MHGNVELGE+V
Sbjct: 433 WGALLGGCQMHGNVELGEKV 452


>ref|XP_003622275.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355497290|gb|AES78493.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 541

 Score =  122 bits (306), Expect = 3e-26
 Identities = 56/81 (69%), Positives = 67/81 (82%)
 Frame = -1

Query: 248 AHSGMVARGRWCFEAMKRVYMIEPQQQHYACMVDLLGRAGLFAEALKLIGSMPMEADTFV 69
           +HSG+V +GR CF+ MKRVY IEPQ  HYACMVD+L RA LF EAL LI SMPM+ D +V
Sbjct: 377 SHSGLVEQGRCCFDVMKRVYSIEPQIYHYACMVDILSRARLFDEALFLIRSMPMKPDVYV 436

Query: 68  WGALLGACRMHGNVELGERVA 6
           WGALLG C+MHGN++LGE+VA
Sbjct: 437 WGALLGGCQMHGNIKLGEKVA 457


>ref|XP_002269228.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 550

 Score =  107 bits (267), Expect = 1e-21
 Identities = 47/80 (58%), Positives = 60/80 (75%)
 Frame = -1

Query: 248 AHSGMVARGRWCFEAMKRVYMIEPQQQHYACMVDLLGRAGLFAEALKLIGSMPMEADTFV 69
           +HSG++  GRW F  M +VY I+PQ +HY CMVDLLGRAGL  EAL  +  MPM+  + +
Sbjct: 386 SHSGLITEGRWLFSMMTQVYGIKPQLKHYGCMVDLLGRAGLVKEALDFVEKMPMKPHSEL 445

Query: 68  WGALLGACRMHGNVELGERV 9
           WGAL+GACR+HG VELGE +
Sbjct: 446 WGALVGACRIHGQVELGEEL 465


>emb|CBI35273.3| unnamed protein product [Vitis vinifera]
          Length = 405

 Score =  107 bits (267), Expect = 1e-21
 Identities = 47/80 (58%), Positives = 60/80 (75%)
 Frame = -1

Query: 248 AHSGMVARGRWCFEAMKRVYMIEPQQQHYACMVDLLGRAGLFAEALKLIGSMPMEADTFV 69
           +HSG++  GRW F  M +VY I+PQ +HY CMVDLLGRAGL  EAL  +  MPM+  + +
Sbjct: 272 SHSGLITEGRWLFSMMTQVYGIKPQLKHYGCMVDLLGRAGLVKEALDFVEKMPMKPHSEL 331

Query: 68  WGALLGACRMHGNVELGERV 9
           WGAL+GACR+HG VELGE +
Sbjct: 332 WGALVGACRIHGQVELGEEL 351


>ref|XP_002330082.1| predicted protein [Populus trichocarpa] gi|222871507|gb|EEF08638.1|
           predicted protein [Populus trichocarpa]
          Length = 665

 Score =  107 bits (267), Expect = 1e-21
 Identities = 52/80 (65%), Positives = 60/80 (75%)
 Frame = -1

Query: 248 AHSGMVARGRWCFEAMKRVYMIEPQQQHYACMVDLLGRAGLFAEALKLIGSMPMEADTFV 69
           AHSGMV  G   F +M+ VY IEP  +HY C+VDLLGRAGL  EA +++ SMPME    V
Sbjct: 405 AHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAEEVMYSMPMEPSAAV 464

Query: 68  WGALLGACRMHGNVELGERV 9
           WGALLGACR HG+VELGERV
Sbjct: 465 WGALLGACRKHGDVELGERV 484


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