BLASTX nr result

ID: Dioscorea21_contig00033530 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00033530
         (426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69639.1| hypothetical protein VITISV_040272 [Vitis vinifera]   149   2e-34
gb|AAD20430.1| putative Athila retroelement ORF1 protein [Arabid...   140   1e-31
dbj|BAB10790.1| retroelement pol polyprotein-like [Arabidopsis t...   136   2e-30
gb|AAF67369.1| Hypothetical protein T15F17.a [Arabidopsis thaliana]   133   1e-29
gb|AAF79809.1|AC020646_32 T32E20.9 [Arabidopsis thaliana]             133   1e-29

>emb|CAN69639.1| hypothetical protein VITISV_040272 [Vitis vinifera]
          Length = 437

 Score =  149 bits (376), Expect = 2e-34
 Identities = 72/133 (54%), Positives = 96/133 (72%)
 Frame = +1

Query: 1   SVHAPTVPANNFEIKARTIGMIQNSVQFDGLADEDPHAHLSRFLQICFTFKMNSVSDDAE 180
           S+  P + ANNFEIK   I MI++SVQF GLA++DP+ H++ FL+IC TFK N V DDA 
Sbjct: 235 SIQRPPIQANNFEIKLAIIQMIRSSVQFGGLANDDPNLHIANFLEICDTFKHNGVIDDAI 294

Query: 181 RLRLFPFSLRGAAYRWLTSLAPRSITTWKEMVEKFLARYFPPSKAARLRQEISSFKQGNS 360
           RLRLFPFSL   A  WL SL P +ITTW  +V  FL +YFPP+K+ ++R +I++F Q + 
Sbjct: 295 RLRLFPFSLNNKAKAWLISLPPGTITTWDGLVNAFLTKYFPPAKSIKMRNDITNFLQQDQ 354

Query: 361 ETLFEAHERFKDL 399
           E+L+EA ER  +L
Sbjct: 355 ESLYEAWERKLEL 367


>gb|AAD20430.1| putative Athila retroelement ORF1 protein [Arabidopsis thaliana]
          Length = 622

 Score =  140 bits (352), Expect = 1e-31
 Identities = 71/141 (50%), Positives = 94/141 (66%)
 Frame = +1

Query: 4   VHAPTVPANNFEIKARTIGMIQNSVQFDGLADEDPHAHLSRFLQICFTFKMNSVSDDAER 183
           + AP V  NNFEIK+  I M+Q S +F GL+ EDP  HL +F  +C T K+N +S+DA +
Sbjct: 47  IQAPPVENNNFEIKSSLINMVQTS-KFHGLSMEDPLDHLEQFDMLCSTVKINGISEDAFK 105

Query: 184 LRLFPFSLRGAAYRWLTSLAPRSITTWKEMVEKFLARYFPPSKAARLRQEISSFKQGNSE 363
           LRLFPFSL   A  W  +L  RSIT+W +    FL+++F  ++ ARLR EISSF Q ++E
Sbjct: 106 LRLFPFSLGDRARIWEKNLPQRSITSWDQCKRAFLSKFFSTTRTARLRNEISSFTQRSNE 165

Query: 364 TLFEAHERFKDLLRECPHHGF 426
           +  EA ERFK    +CPHHGF
Sbjct: 166 SFCEAWERFKGYKMQCPHHGF 186


>dbj|BAB10790.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1864

 Score =  136 bits (343), Expect = 2e-30
 Identities = 70/138 (50%), Positives = 91/138 (65%)
 Frame = +1

Query: 13  PTVPANNFEIKARTIGMIQNSVQFDGLADEDPHAHLSRFLQICFTFKMNSVSDDAERLRL 192
           P V  NNFEIK+  I M+Q++ +F GL  EDP  HL  F ++C   K+N VS+D  +LRL
Sbjct: 64  PPVQNNNFEIKSGLIAMVQSN-KFHGLPMEDPLDHLDEFDRLCSLTKINGVSEDGFKLRL 122

Query: 193 FPFSLRGAAYRWLTSLAPRSITTWKEMVEKFLARYFPPSKAARLRQEISSFKQGNSETLF 372
           FPFSL   A++W  SL   SIT+W +  + FLA++F  S+ ARLR +IS F Q N+ET  
Sbjct: 123 FPFSLGDKAHQWEKSLLQGSITSWNDCKKAFLAKFFSNSRTARLRNDISGFTQTNNETFC 182

Query: 373 EAHERFKDLLRECPHHGF 426
           EA ERFK    +CPHHGF
Sbjct: 183 EAWERFKGYQTQCPHHGF 200


>gb|AAF67369.1| Hypothetical protein T15F17.a [Arabidopsis thaliana]
          Length = 703

 Score =  133 bits (335), Expect = 1e-29
 Identities = 69/138 (50%), Positives = 90/138 (65%)
 Frame = +1

Query: 13  PTVPANNFEIKARTIGMIQNSVQFDGLADEDPHAHLSRFLQICFTFKMNSVSDDAERLRL 192
           P V  NNFEIK+  I M+Q++ +F GL  EDP  HL  F ++C   K+N VS+D  +LRL
Sbjct: 32  PPVQNNNFEIKSGLIAMVQSN-KFHGLPMEDPLDHLDEFDRLCSLTKINGVSEDGFKLRL 90

Query: 193 FPFSLRGAAYRWLTSLAPRSITTWKEMVEKFLARYFPPSKAARLRQEISSFKQGNSETLF 372
           FPFSL   A++W  SL   SIT+W +  + FLA++F  S+ ARLR +IS F Q N+ET  
Sbjct: 91  FPFSLGDKAHQWEKSLPQGSITSWNDCKKAFLAKFFSNSRTARLRNDISGFTQTNNETFC 150

Query: 373 EAHERFKDLLRECPHHGF 426
           EA E FK    +CPHHGF
Sbjct: 151 EAWECFKGYQTQCPHHGF 168


>gb|AAF79809.1|AC020646_32 T32E20.9 [Arabidopsis thaliana]
          Length = 1586

 Score =  133 bits (335), Expect = 1e-29
 Identities = 68/136 (50%), Positives = 90/136 (66%)
 Frame = +1

Query: 13  PTVPANNFEIKARTIGMIQNSVQFDGLADEDPHAHLSRFLQICFTFKMNSVSDDAERLRL 192
           P V  NNFEIK+  I M+Q++ +F GL  EDP  HL  F ++C   K+N VS+D  +LRL
Sbjct: 64  PPVQNNNFEIKSGLIAMVQSN-KFHGLPMEDPLDHLDEFDRLCSLTKINRVSEDGFKLRL 122

Query: 193 FPFSLRGAAYRWLTSLAPRSITTWKEMVEKFLARYFPPSKAARLRQEISSFKQGNSETLF 372
           FPFSL   A++W  SL   SIT+W +  + FLA++F  S+ ARLR +IS F Q N+ET +
Sbjct: 123 FPFSLGDKAHQWEKSLPQGSITSWNDCKKAFLAKFFSNSRTARLRNDISGFTQTNNETFY 182

Query: 373 EAHERFKDLLRECPHH 420
           EA ERFK    +CPHH
Sbjct: 183 EAWERFKGYQTQCPHH 198


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