BLASTX nr result

ID: Dioscorea21_contig00032979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032979
         (538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332139.1| predicted protein [Populus trichocarpa] gi|2...    89   4e-16
ref|NP_174654.1| phloem protein 2-A4 [Arabidopsis thaliana] gi|7...    88   9e-16
gb|ABN06032.1| Galactose-binding like [Medicago truncatula]            87   2e-15
ref|XP_002869965.1| hypothetical protein ARALYDRAFT_492886 [Arab...    87   2e-15
ref|XP_003607876.1| F-box protein PP2-B10 [Medicago truncatula] ...    86   3e-15

>ref|XP_002332139.1| predicted protein [Populus trichocarpa] gi|222875189|gb|EEF12320.1|
           predicted protein [Populus trichocarpa]
          Length = 280

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 52/139 (37%), Positives = 73/139 (52%), Gaps = 5/139 (3%)
 Frame = +1

Query: 136 LNTKAVSVIWGGEACKDRYWK-----KSLDGSTQVLELLAVYWLEVTGKIPLSLLSPNTK 300
           L  K +S+ WGG+A   RYWK     +S D +  V ELL V WLE+ GK    +LSP   
Sbjct: 133 LFAKDLSITWGGDA---RYWKWPSICESGDVTVDVAELLDVCWLEIYGKFNTKMLSPGIL 189

Query: 301 YKLLFNIKVTSDASGWNSPVILKVSLPGNKINPVYVNLYEYVGHGWVDVPEGLEFTVPSD 480
           Y+++F IK+   A GW  PV + + LP          L       W++VP G EF    +
Sbjct: 190 YEVVFVIKLKDPAYGWGVPVNVSLVLPNGYKQERKEKLQTKPREQWIEVPVG-EFITSPE 248

Query: 481 NSGKLSFSMYENECDEWKK 537
           N G++ F M+E +  EWK+
Sbjct: 249 NVGEIQFGMHEYDGGEWKR 267


>ref|NP_174654.1| phloem protein 2-A4 [Arabidopsis thaliana]
           gi|75169593|sp|Q9C8U9.1|P2A04_ARATH RecName:
           Full=Uncharacterized protein PHLOEM PROTEIN 2-LIKE A4;
           Short=AtPP2-A4 gi|12324499|gb|AAG52204.1|AC022288_3
           hypothetical protein; 30914-29949 [Arabidopsis thaliana]
           gi|332193519|gb|AEE31640.1| phloem protein 2-A4
           [Arabidopsis thaliana]
          Length = 165

 Score = 87.8 bits (216), Expect = 9e-16
 Identities = 55/156 (35%), Positives = 81/156 (51%), Gaps = 9/156 (5%)
 Frame = +1

Query: 97  YTMWEAGGKQGLTLNTKAVSVIWGGEACKDRYWKK-------SLDGSTQVLELLAVYWLE 255
           YT+   G K    +  + +S+ W     KD YW         S +       L AV WL+
Sbjct: 3   YTLIIYGQKH--MIYARDLSIAWSD---KDEYWSWLPLRYDISSEKLVDAAVLEAVCWLD 57

Query: 256 VTGKIPLSLLSPNTKYKLLFNIKVTSDASGWNSPVILKVSLPGNKINPV--YVNLYEYVG 429
           V GK     L+  T Y++++ +K+   ASGWN PV LK++LP  K  P    + L E++G
Sbjct: 58  VNGKFDTRELTLETTYEVVYVVKLEDTASGWNIPVNLKLTLPDGKKRPQERSMCLKEHIG 117

Query: 430 HGWVDVPEGLEFTVPSDNSGKLSFSMYENECDEWKK 537
             W+D+  G EF    DN+G++SFSMYE +   WK+
Sbjct: 118 KRWIDISAG-EFVTSPDNAGEISFSMYETKSCCWKR 152


>gb|ABN06032.1| Galactose-binding like [Medicago truncatula]
          Length = 290

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 56/170 (32%), Positives = 82/170 (48%), Gaps = 6/170 (3%)
 Frame = +1

Query: 46  SKRRMVSAHQIGMLADNYTMWEAGGKQG-LTLNTKAVSVIWGGEACKDRYWK-----KSL 207
           S+ +M      G+   + T  +   K     L  +A+S+ W  +     YWK        
Sbjct: 110 SREKMCDQLYAGVFLHHKTKAKKNSKANCFMLYARALSITWAEDP---NYWKWIQQKDVS 166

Query: 208 DGSTQVLELLAVYWLEVTGKIPLSLLSPNTKYKLLFNIKVTSDASGWNSPVILKVSLPGN 387
           +G+T+V EL  V WLEV GK     LSP   Y++ F I +   A GW  PV +++ LPG 
Sbjct: 167 EGTTEVAELKRVCWLEVHGKFDTRKLSPGILYQVSFIIMLKDPAQGWELPVNVRLVLPGG 226

Query: 388 KINPVYVNLYEYVGHGWVDVPEGLEFTVPSDNSGKLSFSMYENECDEWKK 537
           K      NL E +   W++VP G EF V   + G++  SM+E E   WK+
Sbjct: 227 KKQQHKENLMEKLRARWIEVPVG-EFVVSEKDGGEMEISMFEYEGGMWKQ 275


>ref|XP_002869965.1| hypothetical protein ARALYDRAFT_492886 [Arabidopsis lyrata subsp.
           lyrata] gi|297315801|gb|EFH46224.1| hypothetical protein
           ARALYDRAFT_492886 [Arabidopsis lyrata subsp. lyrata]
          Length = 232

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 51/141 (36%), Positives = 76/141 (53%), Gaps = 7/141 (4%)
 Frame = +1

Query: 136 LNTKAVSVIWGGEACKDRYW-----KKSLDGSTQVLELLAVYWLEVTGKIPLSLLSPNTK 300
           L  K +S+ W  +     YW     K+S + + + + L  V WL++TGK     L+P   
Sbjct: 83  LFAKNLSITWSDDV---NYWTWFTDKESPNETVEAVGLKNVCWLDITGKFDTRNLTPGIA 139

Query: 301 YKLLFNIKVTSDASGWNSPVILKVSLPGNKINP--VYVNLYEYVGHGWVDVPEGLEFTVP 474
           Y++ F +K+   A GW++PV LK+ LP  K  P    V+L E   + WVDV  G EF   
Sbjct: 140 YEVFFKVKLEDPAYGWDTPVNLKLVLPNGKEQPQEQKVSLRELPRYKWVDVRVG-EFVPE 198

Query: 475 SDNSGKLSFSMYENECDEWKK 537
              +G+++FSMYE+E   WKK
Sbjct: 199 KSAAGEITFSMYEHEAGVWKK 219


>ref|XP_003607876.1| F-box protein PP2-B10 [Medicago truncatula]
           gi|355508931|gb|AES90073.1| F-box protein PP2-B10
           [Medicago truncatula] gi|388501714|gb|AFK38923.1|
           unknown [Medicago truncatula]
          Length = 293

 Score = 86.3 bits (212), Expect = 3e-15
 Identities = 51/139 (36%), Positives = 72/139 (51%), Gaps = 5/139 (3%)
 Frame = +1

Query: 136 LNTKAVSVIWGGEACKDRYWK-----KSLDGSTQVLELLAVYWLEVTGKIPLSLLSPNTK 300
           L  +A+S+ W  +     YWK        +G+T+V EL  V WLEV GK     LSP   
Sbjct: 144 LYARALSITWAEDP---NYWKWIQQKDVSEGTTEVAELKRVCWLEVHGKFDTRKLSPGIL 200

Query: 301 YKLLFNIKVTSDASGWNSPVILKVSLPGNKINPVYVNLYEYVGHGWVDVPEGLEFTVPSD 480
           Y++ F I +   A GW  PV +++ LPG K      NL E +   W++VP G EF V   
Sbjct: 201 YQVSFIIMLKDPAQGWELPVNVRLVLPGGKKQQHKENLMEKLRARWIEVPVG-EFVVSEK 259

Query: 481 NSGKLSFSMYENECDEWKK 537
           + G++  SM+E E   WK+
Sbjct: 260 DGGEMEISMFEYEGGMWKQ 278


Top