BLASTX nr result

ID: Dioscorea21_contig00032970 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032970
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301427.1| predicted protein [Populus trichocarpa] gi|2...    96   2e-18
ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containi...    94   2e-17
emb|CBI40590.3| unnamed protein product [Vitis vinifera]               94   2e-17
emb|CAN66974.1| hypothetical protein VITISV_022076 [Vitis vinifera]    94   2e-17
ref|XP_004155716.1| PREDICTED: pentatricopeptide repeat-containi...    93   2e-17

>ref|XP_002301427.1| predicted protein [Populus trichocarpa] gi|222843153|gb|EEE80700.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 43/76 (56%), Positives = 60/76 (78%)
 Frame = +3

Query: 3   KVFDEMPHRDVASWNSLLDGYAKSGDLMRAQELFDSMPVRNVISWTSMVAGFCQNGRYED 182
           +VFDEM  RD+ +WNSL+ GY++SGD+  A ELF  MP R+V+SWT+M++G+ QNG Y  
Sbjct: 66  QVFDEMTVRDIPTWNSLIAGYSRSGDMEGALELFKLMPSRSVVSWTTMISGYSQNGMYTK 125

Query: 183 ALQVFVKMLEDCEVRP 230
           AL++F+KM +D EVRP
Sbjct: 126 ALEMFLKMEKDKEVRP 141


>ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08510-like [Vitis vinifera]
          Length = 512

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 43/76 (56%), Positives = 56/76 (73%)
 Frame = +3

Query: 3   KVFDEMPHRDVASWNSLLDGYAKSGDLMRAQELFDSMPVRNVISWTSMVAGFCQNGRYED 182
           K FDEM  RDV +WNS++ GYA+ GDL  A ELF  MP RNV SWT+M++G+ QNG+Y  
Sbjct: 138 KQFDEMTVRDVPTWNSMIAGYARCGDLEGALELFRLMPARNVTSWTAMISGYAQNGQYAK 197

Query: 183 ALQVFVKMLEDCEVRP 230
           AL +F+ M E+ E+RP
Sbjct: 198 ALSMFLMMEEETEMRP 213


>emb|CBI40590.3| unnamed protein product [Vitis vinifera]
          Length = 495

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 43/76 (56%), Positives = 56/76 (73%)
 Frame = +3

Query: 3   KVFDEMPHRDVASWNSLLDGYAKSGDLMRAQELFDSMPVRNVISWTSMVAGFCQNGRYED 182
           K FDEM  RDV +WNS++ GYA+ GDL  A ELF  MP RNV SWT+M++G+ QNG+Y  
Sbjct: 138 KQFDEMTVRDVPTWNSMIAGYARCGDLEGALELFRLMPARNVTSWTAMISGYAQNGQYAK 197

Query: 183 ALQVFVKMLEDCEVRP 230
           AL +F+ M E+ E+RP
Sbjct: 198 ALSMFLMMEEETEMRP 213


>emb|CAN66974.1| hypothetical protein VITISV_022076 [Vitis vinifera]
          Length = 967

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 43/76 (56%), Positives = 56/76 (73%)
 Frame = +3

Query: 3   KVFDEMPHRDVASWNSLLDGYAKSGDLMRAQELFDSMPVRNVISWTSMVAGFCQNGRYED 182
           K FDEM  RDV +WNS++ GYA+ GDL  A ELF  MP RNV SWT+M++G+ QNG+Y  
Sbjct: 623 KQFDEMTVRDVPTWNSMIAGYARCGDLEGALELFRLMPARNVTSWTAMISGYAQNGQYAK 682

Query: 183 ALQVFVKMLEDCEVRP 230
           AL +F+ M E+ E+RP
Sbjct: 683 ALSMFLMMEEETEMRP 698


>ref|XP_004155716.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08510-like [Cucumis sativus]
          Length = 512

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 39/76 (51%), Positives = 59/76 (77%)
 Frame = +3

Query: 3   KVFDEMPHRDVASWNSLLDGYAKSGDLMRAQELFDSMPVRNVISWTSMVAGFCQNGRYED 182
           ++FDEMP RD+ +WNSL+ GYA+SG +  A ELF+ MPVRNVISWT++++G+ QNG+Y  
Sbjct: 138 QLFDEMPVRDIPTWNSLIAGYARSGHMEAALELFNKMPVRNVISWTALISGYAQNGKYAK 197

Query: 183 ALQVFVKMLEDCEVRP 230
           AL++F+ +  +   +P
Sbjct: 198 ALEMFIGLENEKGTKP 213



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/59 (47%), Positives = 43/59 (72%)
 Frame = +3

Query: 30  DVASWNSLLDGYAKSGDLMRAQELFDSMPVRNVISWTSMVAGFCQNGRYEDALQVFVKM 206
           D+ +  +LLD YAK G L  A++LFD MPVR++ +W S++AG+ ++G  E AL++F KM
Sbjct: 116 DMFAMTALLDMYAKLGMLRSARQLFDEMPVRDIPTWNSLIAGYARSGHMEAALELFNKM 174