BLASTX nr result

ID: Dioscorea21_contig00032948 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032948
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...    57   2e-06
emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...    57   2e-06
emb|CAN65484.1| hypothetical protein VITISV_029474 [Vitis vinifera]    56   3e-06
emb|CAN68838.1| hypothetical protein VITISV_030956 [Vitis vinifera]    55   8e-06
gb|AAW22882.1| unknown [Solanum lycopersicum]                          55   8e-06

>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
 Frame = +3

Query: 3   WILSIVYNPQVLSAQGRVWYELSKVSRTRV-PWVVVGDFNAIRTESEHRGGNFKNYAAKS 179
           W+ S +Y     + +  +W EL ++      PW++ GDFN   +  E  G        + 
Sbjct: 101 WLFSAIYASPDSTLRKELWRELEQIKNQYTGPWLLAGDFNETSSLCERNGSESSEMQRRC 160

Query: 180 NLFNDFILSNNLLDLGFCGPSYTW 251
             F ++I +N L+DLGF GP++TW
Sbjct: 161 KDFANWIENNALIDLGFTGPAHTW 184


>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
 Frame = +3

Query: 6   ILSIVYNPQVLSAQGRVWYELSKVSRTR-VPWVVVGDFNAIRTESEHRGGNFKNYAAKSN 182
           +L+ ++ P V+S + + W +L++ S  R  PW+V GD N +   +E  GG       +  
Sbjct: 103 LLTGMHAPSVVSERNKYWVDLTEDSPPRGTPWLVAGDMNEVLHGNEKMGGRQVG-KEQGK 161

Query: 183 LFNDFILSNNLLDLGFCGPSYTW 251
              D+I +N LLDLGF GP +TW
Sbjct: 162 QCKDWIAANALLDLGFQGPKFTW 184


>emb|CAN65484.1| hypothetical protein VITISV_029474 [Vitis vinifera]
          Length = 1882

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 33/82 (40%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
 Frame = +3

Query: 9    LSIVYNPQVLSAQGRVWYELSKVSRTRVP-WVVVGDFNAIRTESEHRGGNFKNYAAKSNL 185
            LS VY P + + +   W ELS ++    P W V GDFN IR  SE  GG+    + K   
Sbjct: 768  LSAVYGPNISALRKDFWVELSDIAGLASPRWCVGGDFNVIRRSSEKLGGSRXTPSMK--X 825

Query: 186  FNDFILSNNLLDLGFCGPSYTW 251
            F+DFI    L+DL     S+TW
Sbjct: 826  FDDFISDCELIDLPLRSASFTW 847


>emb|CAN68838.1| hypothetical protein VITISV_030956 [Vitis vinifera]
          Length = 1881

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 33/82 (40%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
 Frame = +3

Query: 9    LSIVYNPQVLSAQGRVWYELSKVSRTRVP-WVVVGDFNAIRTESEHRGGNFKNYAAKSNL 185
            LS VY P   + +  +W ELS ++    P W V GDFN IR  SE  GG+    + K   
Sbjct: 934  LSAVYGPNNSALRKDLWVELSDIAGLASPRWCVGGDFNVIRRSSEKLGGSRLTPSMKD-- 991

Query: 186  FNDFILSNNLLDLGFCGPSYTW 251
            F+DFI    L+DL     S+TW
Sbjct: 992  FDDFISDCELIDLPLRSASFTW 1013


>gb|AAW22882.1| unknown [Solanum lycopersicum]
          Length = 190

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 30/84 (35%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
 Frame = +3

Query: 3   WILSIVYNPQVLSAQGRVWYELSKVSRT-RVPWVVVGDFNAIRTESEHRGGNFKNYAAKS 179
           W+L+ +Y P     +  VW+E+         PWVV GDFN +R  SE +  N        
Sbjct: 106 WVLTGIYAPNNREEREEVWWEVGSTRGLFNSPWVVCGDFNTVRFPSEKK--NCSRITKSI 163

Query: 180 NLFNDFILSNNLLDLGFCGPSYTW 251
              +DFI   +LLDL   G  YTW
Sbjct: 164 TGLSDFIEDMSLLDLQLAGGRYTW 187


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