BLASTX nr result

ID: Dioscorea21_contig00032937 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032937
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE67827.1| hypothetical protein OsJ_25598 [Oryza sativa Japo...   108   3e-22
tpg|DAA64140.1| TPA: hypothetical protein ZEAMMB73_955502 [Zea m...   103   1e-20
ref|XP_002881739.1| SNF2 domain-containing protein [Arabidopsis ...   100   1e-19
ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH...   100   2e-19
emb|CBI25341.3| unnamed protein product [Vitis vinifera]              100   2e-19

>gb|EEE67827.1| hypothetical protein OsJ_25598 [Oryza sativa Japonica Group]
          Length = 1663

 Score =  108 bits (271), Expect = 3e-22
 Identities = 50/82 (60%), Positives = 63/82 (76%)
 Frame = -2

Query: 248 IIEMAGNYTCALCSELFEAANSNVSTGATLIVCPAPILAQWYSEVMRHTRPGSLKVSIYD 69
           I E    Y C LC EL EAA +N+S+ ATLIVCP+PILAQW+SE++RHTRPGSLKV IY+
Sbjct: 477 IAETEEKYICTLCLELIEAAQTNISSNATLIVCPSPILAQWHSEIIRHTRPGSLKVCIYE 536

Query: 68  GAKNAAASATLTTDMRELAAAD 3
           GAKN   ++T  +DM E++ AD
Sbjct: 537 GAKNTDLTSTQKSDMAEISTAD 558


>tpg|DAA64140.1| TPA: hypothetical protein ZEAMMB73_955502 [Zea mays]
          Length = 597

 Score =  103 bits (258), Expect = 1e-20
 Identities = 49/82 (59%), Positives = 58/82 (70%)
 Frame = -2

Query: 248 IIEMAGNYTCALCSELFEAANSNVSTGATLIVCPAPILAQWYSEVMRHTRPGSLKVSIYD 69
           I+E    Y CALC EL EA  +N+ + ATLIVCPAPILAQW+SE+ RHTRPGSLKV IY+
Sbjct: 470 IVETEDKYICALCLELIEATQTNILSHATLIVCPAPILAQWHSEITRHTRPGSLKVCIYE 529

Query: 68  GAKNAAASATLTTDMRELAAAD 3
           GA+N   S     DM E+  AD
Sbjct: 530 GARNLDPSTIQKNDMTEIITAD 551


>ref|XP_002881739.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
           gi|297327578|gb|EFH57998.1| SNF2 domain-containing
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1635

 Score =  100 bits (249), Expect = 1e-19
 Identities = 48/86 (55%), Positives = 60/86 (69%)
 Frame = -2

Query: 260 NATDIIEMAGNYTCALCSELFEAANSNVSTGATLIVCPAPILAQWYSEVMRHTRPGSLKV 81
           +AT+II+  G Y C +CSEL +   S +STGATLIVCPAPIL QW+SE+ RHTR GSL  
Sbjct: 454 DATEIIDREGEYICQMCSELLQVTASPISTGATLIVCPAPILPQWHSEITRHTRLGSLVT 513

Query: 80  SIYDGAKNAAASATLTTDMRELAAAD 3
            IY+G +NA+ S     D+ EL  AD
Sbjct: 514 CIYEGVRNASLSEEPMIDITELLNAD 539


>ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Vitis vinifera]
          Length = 1704

 Score =  100 bits (248), Expect = 2e-19
 Identities = 44/86 (51%), Positives = 62/86 (72%)
 Frame = -2

Query: 260 NATDIIEMAGNYTCALCSELFEAANSNVSTGATLIVCPAPILAQWYSEVMRHTRPGSLKV 81
           N T+I+ M G + C LC EL +A +S  +TGATLIVCPAPIL QW++E++RHT PGSLK+
Sbjct: 474 NKTNIVLMDGEHICQLCLELIQATDSPAATGATLIVCPAPILPQWHAEIIRHTNPGSLKL 533

Query: 80  SIYDGAKNAAASATLTTDMRELAAAD 3
            +Y+G +N + S     D+ +L +AD
Sbjct: 534 CVYEGVRNTSLSNAYAMDISKLISAD 559


>emb|CBI25341.3| unnamed protein product [Vitis vinifera]
          Length = 1717

 Score =  100 bits (248), Expect = 2e-19
 Identities = 44/86 (51%), Positives = 62/86 (72%)
 Frame = -2

Query: 260 NATDIIEMAGNYTCALCSELFEAANSNVSTGATLIVCPAPILAQWYSEVMRHTRPGSLKV 81
           N T+I+ M G + C LC EL +A +S  +TGATLIVCPAPIL QW++E++RHT PGSLK+
Sbjct: 499 NKTNIVLMDGEHICQLCLELIQATDSPAATGATLIVCPAPILPQWHAEIIRHTNPGSLKL 558

Query: 80  SIYDGAKNAAASATLTTDMRELAAAD 3
            +Y+G +N + S     D+ +L +AD
Sbjct: 559 CVYEGVRNTSLSNAYAMDISKLISAD 584


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