BLASTX nr result

ID: Dioscorea21_contig00032873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032873
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW66778.1| putative HLH DNA-binding domain superfamily prote...    65   7e-09
gb|AFW66776.1| putative HLH DNA-binding domain superfamily prote...    65   7e-09
gb|AFW66775.1| putative HLH DNA-binding domain superfamily prote...    65   7e-09
ref|NP_001148890.1| DNA binding protein [Zea mays] gi|195622964|...    65   7e-09
gb|ACG27921.1| DNA binding protein [Zea mays] gi|195626440|gb|AC...    65   7e-09

>gb|AFW66778.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
          Length = 144

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 30/62 (48%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
 Frame = -1

Query: 302 YMPHPVVIHPCXXXXXXXXXXXXXANKPGPFAA-FPSVPMWQWMPSAFVDTTQDPKLWPP 126
           ++PHP   HP               NK  P  A FP + MWQW+P   VDTTQDPKLWPP
Sbjct: 84  HLPHPASYHPAAFAPFVPPQQAAG-NKSAPIPAPFPGMAMWQWLPPTIVDTTQDPKLWPP 142

Query: 125 NA 120
           NA
Sbjct: 143 NA 144


>gb|AFW66776.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
          Length = 231

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 30/62 (48%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
 Frame = -1

Query: 302 YMPHPVVIHPCXXXXXXXXXXXXXANKPGPFAA-FPSVPMWQWMPSAFVDTTQDPKLWPP 126
           ++PHP   HP               NK  P  A FP + MWQW+P   VDTTQDPKLWPP
Sbjct: 171 HLPHPASYHPAAFAPFVPPQQAAG-NKSAPIPAPFPGMAMWQWLPPTIVDTTQDPKLWPP 229

Query: 125 NA 120
           NA
Sbjct: 230 NA 231


>gb|AFW66775.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
          Length = 232

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 30/62 (48%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
 Frame = -1

Query: 302 YMPHPVVIHPCXXXXXXXXXXXXXANKPGPFAA-FPSVPMWQWMPSAFVDTTQDPKLWPP 126
           ++PHP   HP               NK  P  A FP + MWQW+P   VDTTQDPKLWPP
Sbjct: 172 HLPHPASYHPAAFAPFVPPQQAAG-NKSAPIPAPFPGMAMWQWLPPTIVDTTQDPKLWPP 230

Query: 125 NA 120
           NA
Sbjct: 231 NA 232


>ref|NP_001148890.1| DNA binding protein [Zea mays] gi|195622964|gb|ACG33312.1| DNA
           binding protein [Zea mays]
          Length = 236

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 30/62 (48%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
 Frame = -1

Query: 302 YMPHPVVIHPCXXXXXXXXXXXXXANKPGPFAA-FPSVPMWQWMPSAFVDTTQDPKLWPP 126
           ++PHP   HP               NK  P  A FP + MWQW+P   VDTTQDPKLWPP
Sbjct: 179 HLPHPASYHPAAFTPFAPPPA----NKSAPIPAPFPGMAMWQWLPPTIVDTTQDPKLWPP 234

Query: 125 NA 120
           NA
Sbjct: 235 NA 236


>gb|ACG27921.1| DNA binding protein [Zea mays] gi|195626440|gb|ACG35050.1| DNA
           binding protein [Zea mays] gi|195635971|gb|ACG37454.1|
           DNA binding protein [Zea mays]
          Length = 231

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 30/62 (48%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
 Frame = -1

Query: 302 YMPHPVVIHPCXXXXXXXXXXXXXANKPGPFAA-FPSVPMWQWMPSAFVDTTQDPKLWPP 126
           ++PHP   HP               NK  P  A FP + MWQW+P   VDTTQDPKLWPP
Sbjct: 171 HLPHPASYHPAAFAPFVPPQQAAG-NKSAPIPAPFPGMAMWQWLPPTIVDTTQDPKLWPP 229

Query: 125 NA 120
           NA
Sbjct: 230 NA 231


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