BLASTX nr result

ID: Dioscorea21_contig00032865 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032865
         (567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29860.3| unnamed protein product [Vitis vinifera]              247   8e-64
ref|XP_002283735.1| PREDICTED: pentatricopeptide repeat-containi...   247   8e-64
ref|NP_001044606.1| Os01g0814300 [Oryza sativa Japonica Group] g...   246   1e-63
ref|XP_003564466.1| PREDICTED: pentatricopeptide repeat-containi...   245   3e-63
tpg|DAA57138.1| TPA: hypothetical protein ZEAMMB73_430226 [Zea m...   243   2e-62

>emb|CBI29860.3| unnamed protein product [Vitis vinifera]
          Length = 655

 Score =  247 bits (631), Expect = 8e-64
 Identities = 117/184 (63%), Positives = 139/184 (75%)
 Frame = +1

Query: 7   VNDMPISPNSIIWRTLLMGCKIRGSLDKXXXXXXXXXXXXPHNPENYVMLSNLYASRAQW 186
           V  MPISPN +IWRTLL+GCK   +LDK            PHN ENY++LSNLYAS +QW
Sbjct: 421 VETMPISPNPVIWRTLLVGCKKSKNLDKSEVVAQRLLELEPHNAENYILLSNLYASMSQW 480

Query: 187 EKVSYMRKKMKDSGAKIVPGCSCIELDGIVHRFVVGDESHPDIKEIRKVLIDVSERVHRA 366
           EK+S +RKKMK  G K VPGCS IE+DG+VH FV+GD SHP+  E+R++L D+S+RVH  
Sbjct: 481 EKMSQVRKKMKGMGIKAVPGCSSIEVDGLVHEFVMGDWSHPEAMEVREILRDISKRVHAV 540

Query: 367 GHVPWTCGVLHDVAKEEKEIALCEHSERLAIAYGLLKTKSPTVIRVVKNLRACDDCHEIT 546
           GH P    VLH+V  EEKE ALCEHSERLAIAYGLLKTK+P  IR+VKNLR C DCHE+T
Sbjct: 541 GHQPGISDVLHNVVDEEKENALCEHSERLAIAYGLLKTKTPMAIRIVKNLRVCGDCHEVT 600

Query: 547 KIVS 558
           KI+S
Sbjct: 601 KIIS 604


>ref|XP_002283735.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
           [Vitis vinifera]
          Length = 564

 Score =  247 bits (631), Expect = 8e-64
 Identities = 117/184 (63%), Positives = 139/184 (75%)
 Frame = +1

Query: 7   VNDMPISPNSIIWRTLLMGCKIRGSLDKXXXXXXXXXXXXPHNPENYVMLSNLYASRAQW 186
           V  MPISPN +IWRTLL+GCK   +LDK            PHN ENY++LSNLYAS +QW
Sbjct: 352 VETMPISPNPVIWRTLLVGCKKSKNLDKSEVVAQRLLELEPHNAENYILLSNLYASMSQW 411

Query: 187 EKVSYMRKKMKDSGAKIVPGCSCIELDGIVHRFVVGDESHPDIKEIRKVLIDVSERVHRA 366
           EK+S +RKKMK  G K VPGCS IE+DG+VH FV+GD SHP+  E+R++L D+S+RVH  
Sbjct: 412 EKMSQVRKKMKGMGIKAVPGCSSIEVDGLVHEFVMGDWSHPEAMEVREILRDISKRVHAV 471

Query: 367 GHVPWTCGVLHDVAKEEKEIALCEHSERLAIAYGLLKTKSPTVIRVVKNLRACDDCHEIT 546
           GH P    VLH+V  EEKE ALCEHSERLAIAYGLLKTK+P  IR+VKNLR C DCHE+T
Sbjct: 472 GHQPGISDVLHNVVDEEKENALCEHSERLAIAYGLLKTKTPMAIRIVKNLRVCGDCHEVT 531

Query: 547 KIVS 558
           KI+S
Sbjct: 532 KIIS 535


>ref|NP_001044606.1| Os01g0814300 [Oryza sativa Japonica Group]
           gi|20161481|dbj|BAB90405.1| selenium-binding
           protein-like [Oryza sativa Japonica Group]
           gi|56785052|dbj|BAD82691.1| PPR repeat containing
           protein-like [Oryza sativa Japonica Group]
           gi|113534137|dbj|BAF06520.1| Os01g0814300 [Oryza sativa
           Japonica Group]
          Length = 604

 Score =  246 bits (629), Expect = 1e-63
 Identities = 117/188 (62%), Positives = 143/188 (76%)
 Frame = +1

Query: 4   FVNDMPISPNSIIWRTLLMGCKIRGSLDKXXXXXXXXXXXXPHNPENYVMLSNLYASRAQ 183
           FV  M I PNS+IWRTLL+  K     D             P NPENYV+LSNLYAS +Q
Sbjct: 391 FVTGMAIPPNSVIWRTLLVASKNSNRFDIVQSASKKLLELEPCNPENYVLLSNLYASNSQ 450

Query: 184 WEKVSYMRKKMKDSGAKIVPGCSCIELDGIVHRFVVGDESHPDIKEIRKVLIDVSERVHR 363
           W++VSYMRKKMK++   +V GCS IE++G +H+FVV D+SHP+IKEIR +L ++++RV R
Sbjct: 451 WDRVSYMRKKMKENNVNVVAGCSSIEINGYLHKFVVSDDSHPEIKEIRLLLREIADRVVR 510

Query: 364 AGHVPWTCGVLHDVAKEEKEIALCEHSERLAIAYGLLKTKSPTVIRVVKNLRACDDCHEI 543
           AGH PWT  VLHDV +EEKE+ALCEHSERLAIAYGLLKTK+P VIRVVKNLR C DCHE+
Sbjct: 511 AGHKPWTAAVLHDVGEEEKEVALCEHSERLAIAYGLLKTKAPHVIRVVKNLRFCPDCHEV 570

Query: 544 TKIVSRVF 567
            KIVS+ +
Sbjct: 571 AKIVSKSY 578


>ref|XP_003564466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Brachypodium distachyon]
          Length = 600

 Score =  245 bits (626), Expect = 3e-63
 Identities = 116/188 (61%), Positives = 142/188 (75%)
 Frame = +1

Query: 4   FVNDMPISPNSIIWRTLLMGCKIRGSLDKXXXXXXXXXXXXPHNPENYVMLSNLYASRAQ 183
           FV  MPISPNS+IWR LL+  K    +D             P NPENYV+LSNLYA  +Q
Sbjct: 387 FVTGMPISPNSVIWRNLLVASKSSNRIDIVELASRRLFELEPQNPENYVLLSNLYALNSQ 446

Query: 184 WEKVSYMRKKMKDSGAKIVPGCSCIELDGIVHRFVVGDESHPDIKEIRKVLIDVSERVHR 363
           W++V YMRKKMKD+   +V GCS IE++G +H+FVV D SHP+IK+IR VL ++++RV  
Sbjct: 447 WDRVRYMRKKMKDNNVTVVAGCSSIEINGYLHKFVVSDGSHPEIKKIRLVLREIADRVLC 506

Query: 364 AGHVPWTCGVLHDVAKEEKEIALCEHSERLAIAYGLLKTKSPTVIRVVKNLRACDDCHEI 543
           AGH PWT  VLHDV +EEKE+ALCEHSERLAIAYGLLKTK+P VIRVVKNLR C DCHE+
Sbjct: 507 AGHKPWTAAVLHDVVEEEKEVALCEHSERLAIAYGLLKTKAPHVIRVVKNLRFCPDCHEV 566

Query: 544 TKIVSRVF 567
           TKI+S+ +
Sbjct: 567 TKIISKSY 574


>tpg|DAA57138.1| TPA: hypothetical protein ZEAMMB73_430226 [Zea mays]
          Length = 648

 Score =  243 bits (619), Expect = 2e-62
 Identities = 113/188 (60%), Positives = 142/188 (75%)
 Frame = +1

Query: 4   FVNDMPISPNSIIWRTLLMGCKIRGSLDKXXXXXXXXXXXXPHNPENYVMLSNLYASRAQ 183
           FV  MP+SPNS+IWRTLL+ CK    +D             PHNPENYV+LSNLYAS +Q
Sbjct: 435 FVIGMPVSPNSVIWRTLLVACKSSNRIDIAESATKRLLELEPHNPENYVLLSNLYASNSQ 494

Query: 184 WEKVSYMRKKMKDSGAKIVPGCSCIELDGIVHRFVVGDESHPDIKEIRKVLIDVSERVHR 363
           W++VSY+R+KMK      + G S IE++G +H FVV D+SHP+I+EIR VL ++++RV R
Sbjct: 495 WDRVSYLRRKMKGKNVTAIAGRSSIEINGHLHEFVVSDDSHPEIREIRLVLREMADRVRR 554

Query: 364 AGHVPWTCGVLHDVAKEEKEIALCEHSERLAIAYGLLKTKSPTVIRVVKNLRACDDCHEI 543
           AGH PWT  VLHDV +EEKE ALC+HSERLAIAYGLLKT++P VIRVVKNLR C DCHE+
Sbjct: 555 AGHKPWTAAVLHDVGEEEKEAALCQHSERLAIAYGLLKTRAPHVIRVVKNLRFCLDCHEV 614

Query: 544 TKIVSRVF 567
            KI+S+ +
Sbjct: 615 AKIISKAY 622


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