BLASTX nr result

ID: Dioscorea21_contig00032793 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032793
         (673 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281078.1| PREDICTED: ribonuclease H2 subunit B [Vitis ...   119   4e-25
emb|CAN79021.1| hypothetical protein VITISV_009443 [Vitis vinifera]   119   4e-25
ref|XP_003522673.1| PREDICTED: ribonuclease H2 subunit B-like [G...   109   4e-22
ref|XP_002517803.1| conserved hypothetical protein [Ricinus comm...   107   2e-21
emb|CAE05499.2| OSJNBa0022H21.19 [Oryza sativa Japonica Group] g...   100   2e-19

>ref|XP_002281078.1| PREDICTED: ribonuclease H2 subunit B [Vitis vinifera]
           gi|296081827|emb|CBI20832.3| unnamed protein product
           [Vitis vinifera]
          Length = 277

 Score =  119 bits (299), Expect = 4e-25
 Identities = 68/141 (48%), Positives = 88/141 (62%), Gaps = 2/141 (1%)
 Frame = +2

Query: 2   EIGSTKYYRLENSKVLAWLCHKVHHLEAVLAKLDKNYAVRE-GDQLRDAVFLLGEYLE-E 175
           EIGS+K++RL++SKVLAWLC+KVH L+ +L  LDKNYA R+  D L DA+ +LGEYLE E
Sbjct: 138 EIGSSKFFRLDDSKVLAWLCYKVHQLKQILPTLDKNYAARDKKDTLTDAISILGEYLEDE 197

Query: 176 PLFKLLCSHLKLNIDEVPSKEPKTEFHLISSESNNPNTFHPTQMKDQXXXXXXXXXXXXX 355
           P  KLLC HLKLN+ +   K    EFH  ++  N+  + +  Q K               
Sbjct: 198 PWLKLLCDHLKLNLLDATMKASVIEFH-PTAPDNSLGSSNQLQGKSGNERKTTRPGKQPK 256

Query: 356 XXXXETDSQNIKDMFHRASRR 418
               E DS+NIKDMF RASR+
Sbjct: 257 KAKVEKDSRNIKDMFSRASRK 277


>emb|CAN79021.1| hypothetical protein VITISV_009443 [Vitis vinifera]
          Length = 277

 Score =  119 bits (299), Expect = 4e-25
 Identities = 68/141 (48%), Positives = 88/141 (62%), Gaps = 2/141 (1%)
 Frame = +2

Query: 2   EIGSTKYYRLENSKVLAWLCHKVHHLEAVLAKLDKNYAVRE-GDQLRDAVFLLGEYLE-E 175
           EIGS+K++RL++SKVLAWLC+KVH L+ +L  LDKNYA R+  D L DA+ +LGEYLE E
Sbjct: 138 EIGSSKFFRLDDSKVLAWLCYKVHQLKQILPTLDKNYAARDKKDTLTDAISILGEYLEDE 197

Query: 176 PLFKLLCSHLKLNIDEVPSKEPKTEFHLISSESNNPNTFHPTQMKDQXXXXXXXXXXXXX 355
           P  KLLC HLKLN+ +   K    EFH  ++  N+  + +  Q K               
Sbjct: 198 PWLKLLCDHLKLNLLDATMKAXVIEFH-PTAPDNSLGSSNQLQGKSGNERKTTRPGKQPK 256

Query: 356 XXXXETDSQNIKDMFHRASRR 418
               E DS+NIKDMF RASR+
Sbjct: 257 KAKVEKDSRNIKDMFSRASRK 277


>ref|XP_003522673.1| PREDICTED: ribonuclease H2 subunit B-like [Glycine max]
          Length = 276

 Score =  109 bits (273), Expect = 4e-22
 Identities = 68/145 (46%), Positives = 87/145 (60%), Gaps = 4/145 (2%)
 Frame = +2

Query: 2   EIGSTKYYRLENSKVLAWLCHKVHHLEAVLAKLDKNYAVR-EGDQLRDAVFLLGEYL-EE 175
           E+GS+K++RL++SKVL WLC+KV  L+  L KLDKNYAV+ E D L DAV +LGEYL EE
Sbjct: 138 EVGSSKFFRLDDSKVLRWLCYKVCQLKQTLPKLDKNYAVQSEKDTLIDAVSILGEYLKEE 197

Query: 176 PLFKLLCSHLKLNIDEVPSKEPKTEFHLISSESNNPNTF--HPTQMKDQXXXXXXXXXXX 349
           P  +LLC+HLKLNI EV  K         ++E NN +       +  +            
Sbjct: 198 PWLQLLCNHLKLNILEVTGKAQ------ANAEGNNNSRLCNELQEQSNDKKGTTAKKGRQ 251

Query: 350 XXXXXXETDSQNIKDMFHRASRRGS 424
                 ET+S NIKDMF RASR+ S
Sbjct: 252 AKKVKLETESHNIKDMFSRASRKKS 276


>ref|XP_002517803.1| conserved hypothetical protein [Ricinus communis]
           gi|223543075|gb|EEF44610.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 299

 Score =  107 bits (267), Expect = 2e-21
 Identities = 64/141 (45%), Positives = 84/141 (59%), Gaps = 2/141 (1%)
 Frame = +2

Query: 2   EIGSTKYYRLENSKVLAWLCHKVHHLEAVLAKLDKNYAVR-EGDQLRDAVFLLGEYL-EE 175
           EIGS+K++RL +SKV AWL  KV  L+  ++ LDKNYA + E + L DA+ +LGEYL +E
Sbjct: 161 EIGSSKFFRLNDSKVFAWLLCKVSQLKQAVSSLDKNYAAQDEKNTLADAIMILGEYLKDE 220

Query: 176 PLFKLLCSHLKLNIDEVPSKEPKTEFHLISSESNNPNTFHPTQMKDQXXXXXXXXXXXXX 355
           P  KLLC+HLKLN+ E   K P  E    S   NNP + +  Q K +             
Sbjct: 221 PWLKLLCNHLKLNLLEATRKVPDAE---TSLTENNPASSNLMQEKGKNDGKTKRTGKQAK 277

Query: 356 XXXXETDSQNIKDMFHRASRR 418
               ET+S NI++MF RASRR
Sbjct: 278 KAKVETESLNIREMFSRASRR 298


>emb|CAE05499.2| OSJNBa0022H21.19 [Oryza sativa Japonica Group]
           gi|125590733|gb|EAZ31083.1| hypothetical protein
           OsJ_15180 [Oryza sativa Japonica Group]
          Length = 279

 Score =  100 bits (250), Expect = 2e-19
 Identities = 57/143 (39%), Positives = 84/143 (58%), Gaps = 2/143 (1%)
 Frame = +2

Query: 2   EIGSTKYYRLENSKVLAWLCHKVHHLEAVLAKLDKNYAVR-EGDQLRDAVFLLGEYL-EE 175
           E+ + K++RL++SKVL+WLC KVH+L+ V  KL KNYA + E + L+DAV ++ EYL +E
Sbjct: 139 EVANVKFFRLDDSKVLSWLCCKVHNLKEVFPKLGKNYAAQGEKELLKDAVQIIREYLNDE 198

Query: 176 PLFKLLCSHLKLNIDEVPSKEPKTEFHLISSESNNPNTFHPTQMKDQXXXXXXXXXXXXX 355
           P   LLC  L+L+I E+      +E    +   N+P  FHP + K               
Sbjct: 199 PWLTLLCKKLQLDIKEIIEANKTSEASFCA--ENSPVPFHPAEEKLGSSSTRSSKGRPAK 256

Query: 356 XXXXETDSQNIKDMFHRASRRGS 424
               E +S+NIKDMF R +R+G+
Sbjct: 257 KQKAEVESKNIKDMFRRVTRKGT 279


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