BLASTX nr result
ID: Dioscorea21_contig00032790
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00032790 (360 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002265242.1| PREDICTED: uncharacterized protein LOC100258... 80 1e-13 emb|CAN78181.1| hypothetical protein VITISV_013634 [Vitis vinifera] 80 1e-13 ref|XP_002323183.1| f-box family protein [Populus trichocarpa] g... 77 1e-12 ref|NP_001177054.1| Os12g0609900 [Oryza sativa Japonica Group] g... 75 4e-12 gb|ABA99360.2| F-box domain containing protein, expressed [Oryza... 75 4e-12 >ref|XP_002265242.1| PREDICTED: uncharacterized protein LOC100258440 [Vitis vinifera] Length = 446 Score = 80.5 bits (197), Expect = 1e-13 Identities = 42/91 (46%), Positives = 53/91 (58%), Gaps = 4/91 (4%) Frame = +1 Query: 73 CLVSIFQRLGLDDMVLSVPFVCKSWHKASLDPHCWQVLNFSTL----DFMPLSHFAHRFT 240 CLV++FQ++G++ M+L VP VCKSWHKASLDP CW+ L F D FA RF Sbjct: 176 CLVNVFQKVGMESMLLDVPLVCKSWHKASLDPKCWEFLIFPEYIEPDDIWGRGPFAERFM 235 Query: 241 SLYSLKSLSVINFMKLVLHRSAGFAVELFFP 333 + SV F+K V+ RS G A L P Sbjct: 236 LEF---QFSVTAFIKFVIDRSCGHATALSLP 263 >emb|CAN78181.1| hypothetical protein VITISV_013634 [Vitis vinifera] Length = 716 Score = 80.5 bits (197), Expect = 1e-13 Identities = 42/91 (46%), Positives = 53/91 (58%), Gaps = 4/91 (4%) Frame = +1 Query: 73 CLVSIFQRLGLDDMVLSVPFVCKSWHKASLDPHCWQVLNFSTL----DFMPLSHFAHRFT 240 CLV++FQ++G++ M+L VP VCKSWHKASLDP CW+ L F D FA RF Sbjct: 473 CLVNVFQKVGMESMLLDVPLVCKSWHKASLDPKCWEFLIFPEYIEPDDIWGRGPFAERFM 532 Query: 241 SLYSLKSLSVINFMKLVLHRSAGFAVELFFP 333 + SV F+K V+ RS G A L P Sbjct: 533 LEF---QFSVTAFIKFVIDRSCGHATALSLP 560 Score = 62.4 bits (150), Expect = 4e-08 Identities = 31/84 (36%), Positives = 45/84 (53%) Frame = +1 Query: 73 CLVSIFQRLGLDDMVLSVPFVCKSWHKASLDPHCWQVLNFSTLDFMPLSHFAHRFTSLYS 252 CLV + Q+ GL +V S P+VCK+WH+ASLDP CW+ L F H ++ Sbjct: 80 CLVIVLQKEGLKSLVSSAPYVCKTWHEASLDPKCWEDLAFP----------EHIDLTMER 129 Query: 253 LKSLSVINFMKLVLHRSAGFAVEL 324 L +S FM+ ++ S G A + Sbjct: 130 LAGISRTAFMRAIVDHSGGHATSI 153 >ref|XP_002323183.1| f-box family protein [Populus trichocarpa] gi|222867813|gb|EEF04944.1| f-box family protein [Populus trichocarpa] Length = 314 Score = 77.4 bits (189), Expect = 1e-12 Identities = 42/92 (45%), Positives = 55/92 (59%), Gaps = 5/92 (5%) Frame = +1 Query: 73 CLVSIFQRLGLDDMVLSVPFVCKSWHKASLDPHCWQVLNF-----STLDFMPLSHFAHRF 237 CLV++ R+G++ ++L VPFVCKSW+KASLDP CW+ L F S DF L RF Sbjct: 51 CLVNVLGRVGMESLLLDVPFVCKSWYKASLDPSCWKHLVFPKDLDSERDFTLLD----RF 106 Query: 238 TSLYSLKSLSVINFMKLVLHRSAGFAVELFFP 333 Y +++ SV F K V+ RS G LF P Sbjct: 107 KEKYKIENCSVDAFTKFVVGRSHGNCTGLFLP 138 >ref|NP_001177054.1| Os12g0609900 [Oryza sativa Japonica Group] gi|255670472|dbj|BAH95782.1| Os12g0609900 [Oryza sativa Japonica Group] Length = 312 Score = 75.5 bits (184), Expect = 4e-12 Identities = 38/98 (38%), Positives = 55/98 (56%), Gaps = 5/98 (5%) Frame = +1 Query: 73 CLVSIFQRLGLDDMVLSVPFVCKSWHKASLDPHCWQVLNF-----STLDFMPLSHFAHRF 237 CLV IF+RL LDD+ + P VC+SW A+ D W+ L+ + FMP S A F Sbjct: 44 CLVEIFRRLPLDDVAAAAPLVCRSWRAAARDASLWRALDLRGGGGAAARFMPWSPLAAAF 103 Query: 238 TSLYSLKSLSVINFMKLVLHRSAGFAVELFFPPWLDAP 351 + Y ++ + +++L + R+AG A EL PP L AP Sbjct: 104 AARYGVRRFTFAGYLRLCVARAAGRAAELALPPLLGAP 141 >gb|ABA99360.2| F-box domain containing protein, expressed [Oryza sativa Japonica Group] Length = 290 Score = 75.5 bits (184), Expect = 4e-12 Identities = 38/98 (38%), Positives = 55/98 (56%), Gaps = 5/98 (5%) Frame = +1 Query: 73 CLVSIFQRLGLDDMVLSVPFVCKSWHKASLDPHCWQVLNF-----STLDFMPLSHFAHRF 237 CLV IF+RL LDD+ + P VC+SW A+ D W+ L+ + FMP S A F Sbjct: 22 CLVEIFRRLPLDDVAAAAPLVCRSWRAAARDASLWRALDLRGGGGAAARFMPWSPLAAAF 81 Query: 238 TSLYSLKSLSVINFMKLVLHRSAGFAVELFFPPWLDAP 351 + Y ++ + +++L + R+AG A EL PP L AP Sbjct: 82 AARYGVRRFTFAGYLRLCVARAAGRAAELALPPLLGAP 119