BLASTX nr result

ID: Dioscorea21_contig00032790 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032790
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265242.1| PREDICTED: uncharacterized protein LOC100258...    80   1e-13
emb|CAN78181.1| hypothetical protein VITISV_013634 [Vitis vinifera]    80   1e-13
ref|XP_002323183.1| f-box family protein [Populus trichocarpa] g...    77   1e-12
ref|NP_001177054.1| Os12g0609900 [Oryza sativa Japonica Group] g...    75   4e-12
gb|ABA99360.2| F-box domain containing protein, expressed [Oryza...    75   4e-12

>ref|XP_002265242.1| PREDICTED: uncharacterized protein LOC100258440 [Vitis vinifera]
          Length = 446

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 42/91 (46%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
 Frame = +1

Query: 73  CLVSIFQRLGLDDMVLSVPFVCKSWHKASLDPHCWQVLNFSTL----DFMPLSHFAHRFT 240
           CLV++FQ++G++ M+L VP VCKSWHKASLDP CW+ L F       D      FA RF 
Sbjct: 176 CLVNVFQKVGMESMLLDVPLVCKSWHKASLDPKCWEFLIFPEYIEPDDIWGRGPFAERFM 235

Query: 241 SLYSLKSLSVINFMKLVLHRSAGFAVELFFP 333
             +     SV  F+K V+ RS G A  L  P
Sbjct: 236 LEF---QFSVTAFIKFVIDRSCGHATALSLP 263


>emb|CAN78181.1| hypothetical protein VITISV_013634 [Vitis vinifera]
          Length = 716

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 42/91 (46%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
 Frame = +1

Query: 73  CLVSIFQRLGLDDMVLSVPFVCKSWHKASLDPHCWQVLNFSTL----DFMPLSHFAHRFT 240
           CLV++FQ++G++ M+L VP VCKSWHKASLDP CW+ L F       D      FA RF 
Sbjct: 473 CLVNVFQKVGMESMLLDVPLVCKSWHKASLDPKCWEFLIFPEYIEPDDIWGRGPFAERFM 532

Query: 241 SLYSLKSLSVINFMKLVLHRSAGFAVELFFP 333
             +     SV  F+K V+ RS G A  L  P
Sbjct: 533 LEF---QFSVTAFIKFVIDRSCGHATALSLP 560



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 31/84 (36%), Positives = 45/84 (53%)
 Frame = +1

Query: 73  CLVSIFQRLGLDDMVLSVPFVCKSWHKASLDPHCWQVLNFSTLDFMPLSHFAHRFTSLYS 252
           CLV + Q+ GL  +V S P+VCK+WH+ASLDP CW+ L F            H   ++  
Sbjct: 80  CLVIVLQKEGLKSLVSSAPYVCKTWHEASLDPKCWEDLAFP----------EHIDLTMER 129

Query: 253 LKSLSVINFMKLVLHRSAGFAVEL 324
           L  +S   FM+ ++  S G A  +
Sbjct: 130 LAGISRTAFMRAIVDHSGGHATSI 153


>ref|XP_002323183.1| f-box family protein [Populus trichocarpa]
           gi|222867813|gb|EEF04944.1| f-box family protein
           [Populus trichocarpa]
          Length = 314

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 42/92 (45%), Positives = 55/92 (59%), Gaps = 5/92 (5%)
 Frame = +1

Query: 73  CLVSIFQRLGLDDMVLSVPFVCKSWHKASLDPHCWQVLNF-----STLDFMPLSHFAHRF 237
           CLV++  R+G++ ++L VPFVCKSW+KASLDP CW+ L F     S  DF  L     RF
Sbjct: 51  CLVNVLGRVGMESLLLDVPFVCKSWYKASLDPSCWKHLVFPKDLDSERDFTLLD----RF 106

Query: 238 TSLYSLKSLSVINFMKLVLHRSAGFAVELFFP 333
              Y +++ SV  F K V+ RS G    LF P
Sbjct: 107 KEKYKIENCSVDAFTKFVVGRSHGNCTGLFLP 138


>ref|NP_001177054.1| Os12g0609900 [Oryza sativa Japonica Group]
           gi|255670472|dbj|BAH95782.1| Os12g0609900 [Oryza sativa
           Japonica Group]
          Length = 312

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 38/98 (38%), Positives = 55/98 (56%), Gaps = 5/98 (5%)
 Frame = +1

Query: 73  CLVSIFQRLGLDDMVLSVPFVCKSWHKASLDPHCWQVLNF-----STLDFMPLSHFAHRF 237
           CLV IF+RL LDD+  + P VC+SW  A+ D   W+ L+      +   FMP S  A  F
Sbjct: 44  CLVEIFRRLPLDDVAAAAPLVCRSWRAAARDASLWRALDLRGGGGAAARFMPWSPLAAAF 103

Query: 238 TSLYSLKSLSVINFMKLVLHRSAGFAVELFFPPWLDAP 351
            + Y ++  +   +++L + R+AG A EL  PP L AP
Sbjct: 104 AARYGVRRFTFAGYLRLCVARAAGRAAELALPPLLGAP 141


>gb|ABA99360.2| F-box domain containing protein, expressed [Oryza sativa Japonica
           Group]
          Length = 290

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 38/98 (38%), Positives = 55/98 (56%), Gaps = 5/98 (5%)
 Frame = +1

Query: 73  CLVSIFQRLGLDDMVLSVPFVCKSWHKASLDPHCWQVLNF-----STLDFMPLSHFAHRF 237
           CLV IF+RL LDD+  + P VC+SW  A+ D   W+ L+      +   FMP S  A  F
Sbjct: 22  CLVEIFRRLPLDDVAAAAPLVCRSWRAAARDASLWRALDLRGGGGAAARFMPWSPLAAAF 81

Query: 238 TSLYSLKSLSVINFMKLVLHRSAGFAVELFFPPWLDAP 351
            + Y ++  +   +++L + R+AG A EL  PP L AP
Sbjct: 82  AARYGVRRFTFAGYLRLCVARAAGRAAELALPPLLGAP 119


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