BLASTX nr result

ID: Dioscorea21_contig00032786 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032786
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]   112   3e-23
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ...   111   5e-23
emb|CAN80930.1| hypothetical protein VITISV_005279 [Vitis vinifera]   108   3e-22
emb|CAN74767.1| hypothetical protein VITISV_041860 [Vitis vinifera]   108   3e-22
emb|CAN68235.1| hypothetical protein VITISV_037104 [Vitis vinifera]   108   3e-22

>emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]
          Length = 1109

 Score =  112 bits (280), Expect = 3e-23
 Identities = 53/77 (68%), Positives = 60/77 (77%)
 Frame = -1

Query: 241 ETVRILLALVAQARQIVYHFDVCSAFLNGEIAEEVYVDQPEGFEITGKEHHVFRLRKALY 62
           ETVR LLAL A     VY FDV SAFLNGE+ EEVYV QPEGF + GKE HV+RL+K L+
Sbjct: 768 ETVRTLLALAAHMHWCVYQFDVKSAFLNGELVEEVYVSQPEGFIVPGKEEHVYRLKKTLF 827

Query: 61  GLKQLPRAWYGKLDSHF 11
           GLKQ PRAWY K+DS+F
Sbjct: 828 GLKQAPRAWYSKIDSYF 844


>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1333

 Score =  111 bits (278), Expect = 5e-23
 Identities = 53/78 (67%), Positives = 63/78 (80%)
 Frame = -1

Query: 241  ETVRILLALVAQARQIVYHFDVCSAFLNGEIAEEVYVDQPEGFEITGKEHHVFRLRKALY 62
            ETVR++LAL AQ    VY FDV SAFLNG++ EEVYV QP+GF ITG E+ V++LRKALY
Sbjct: 907  ETVRVVLALAAQLHLPVYQFDVKSAFLNGDLEEEVYVSQPQGFMITGNENKVYKLRKALY 966

Query: 61   GLKQLPRAWYGKLDSHFR 8
            GLKQ PRAWY K+DS F+
Sbjct: 967  GLKQAPRAWYSKIDSFFQ 984


>emb|CAN80930.1| hypothetical protein VITISV_005279 [Vitis vinifera]
          Length = 1291

 Score =  108 bits (271), Expect = 3e-22
 Identities = 50/79 (63%), Positives = 60/79 (75%)
 Frame = -1

Query: 241  ETVRILLALVAQARQIVYHFDVCSAFLNGEIAEEVYVDQPEGFEITGKEHHVFRLRKALY 62
            +T+R+LLAL  Q    VYH DV SAFLNG + EE+YV QPEGFE+ G EH V++L KALY
Sbjct: 878  DTIRLLLALAGQRGWKVYHLDVKSAFLNGILLEEIYVQQPEGFEVIGHEHKVYKLHKALY 937

Query: 61   GLKQLPRAWYGKLDSHFRQ 5
            GLKQ PRAWY ++DSH  Q
Sbjct: 938  GLKQAPRAWYSRIDSHLIQ 956


>emb|CAN74767.1| hypothetical protein VITISV_041860 [Vitis vinifera]
          Length = 1945

 Score =  108 bits (271), Expect = 3e-22
 Identities = 50/79 (63%), Positives = 60/79 (75%)
 Frame = -1

Query: 241  ETVRILLALVAQARQIVYHFDVCSAFLNGEIAEEVYVDQPEGFEITGKEHHVFRLRKALY 62
            +T+R+LLAL  Q    VYH DV SAFLNG + EE+YV QPEGFE+ G EH V++L KALY
Sbjct: 971  DTIRLLLALAGQMGWKVYHLDVKSAFLNGILLEEIYVQQPEGFEVIGHEHKVYKLHKALY 1030

Query: 61   GLKQLPRAWYGKLDSHFRQ 5
            GLKQ PRAWY ++DSH  Q
Sbjct: 1031 GLKQAPRAWYSRIDSHLIQ 1049


>emb|CAN68235.1| hypothetical protein VITISV_037104 [Vitis vinifera]
          Length = 2041

 Score =  108 bits (271), Expect = 3e-22
 Identities = 50/79 (63%), Positives = 60/79 (75%)
 Frame = -1

Query: 241  ETVRILLALVAQARQIVYHFDVCSAFLNGEIAEEVYVDQPEGFEITGKEHHVFRLRKALY 62
            +T+R+LLAL  Q    VYH DV SAFLNG + EE+YV QPEGFE+ G EH V++L KALY
Sbjct: 1616 DTIRLLLALAGQMGWKVYHLDVKSAFLNGILLEEIYVQQPEGFEVIGHEHKVYKLHKALY 1675

Query: 61   GLKQLPRAWYGKLDSHFRQ 5
            GLKQ PRAWY ++DSH  Q
Sbjct: 1676 GLKQAPRAWYSRIDSHLIQ 1694


Top