BLASTX nr result

ID: Dioscorea21_contig00032776 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032776
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containi...   130   9e-29
emb|CBI26570.3| unnamed protein product [Vitis vinifera]              130   9e-29
ref|XP_002309826.1| predicted protein [Populus trichocarpa] gi|2...   130   9e-29
emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]   130   1e-28
ref|XP_002519997.1| pentatricopeptide repeat-containing protein,...   127   9e-28

>ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
           chloroplastic-like [Vitis vinifera]
          Length = 1442

 Score =  130 bits (328), Expect = 9e-29
 Identities = 68/108 (62%), Positives = 77/108 (71%)
 Frame = -1

Query: 326 RILALNPSEFVADILDSRAVQMTPTDLCFVVKTVGHVSWRRSLEVFEWLTLHRRHSPGPR 147
           RIL L   EFVAD+LD R VQMTPTD CFVVK VG  SW+R+LEV+EWL L   +SP  R
Sbjct: 130 RILGLKSEEFVADVLDDRKVQMTPTDFCFVVKWVGQSSWQRALEVYEWLNLRHWYSPNAR 189

Query: 146 LLSTILSVLGRARQTLLAEELFARCADPESNPSAIAVQVYNAMMGVYA 3
           +L+TILSVLG+A Q  LA E+FAR      N     VQVYNAMMGVYA
Sbjct: 190 MLATILSVLGKANQEALAVEIFARAEAASGN----TVQVYNAMMGVYA 233


>emb|CBI26570.3| unnamed protein product [Vitis vinifera]
          Length = 1042

 Score =  130 bits (328), Expect = 9e-29
 Identities = 68/108 (62%), Positives = 77/108 (71%)
 Frame = -1

Query: 326 RILALNPSEFVADILDSRAVQMTPTDLCFVVKTVGHVSWRRSLEVFEWLTLHRRHSPGPR 147
           RIL L   EFVAD+LD R VQMTPTD CFVVK VG  SW+R+LEV+EWL L   +SP  R
Sbjct: 105 RILGLKSEEFVADVLDDRKVQMTPTDFCFVVKWVGQSSWQRALEVYEWLNLRHWYSPNAR 164

Query: 146 LLSTILSVLGRARQTLLAEELFARCADPESNPSAIAVQVYNAMMGVYA 3
           +L+TILSVLG+A Q  LA E+FAR      N     VQVYNAMMGVYA
Sbjct: 165 MLATILSVLGKANQEALAVEIFARAEAASGN----TVQVYNAMMGVYA 208


>ref|XP_002309826.1| predicted protein [Populus trichocarpa] gi|222852729|gb|EEE90276.1|
           predicted protein [Populus trichocarpa]
          Length = 1480

 Score =  130 bits (328), Expect = 9e-29
 Identities = 68/108 (62%), Positives = 77/108 (71%)
 Frame = -1

Query: 326 RILALNPSEFVADILDSRAVQMTPTDLCFVVKTVGHVSWRRSLEVFEWLTLHRRHSPGPR 147
           RIL L   +FVAD+LD R VQMTPTDLCFVVK+VG  SW R+LEV+EWL L   +SP  R
Sbjct: 162 RILGLTQDQFVADVLDDRKVQMTPTDLCFVVKSVGQESWHRALEVYEWLNLRHWYSPNAR 221

Query: 146 LLSTILSVLGRARQTLLAEELFARCADPESNPSAIAVQVYNAMMGVYA 3
           +LSTILSVLG+A Q  LA E+F R      N     VQVYNAMMGVYA
Sbjct: 222 MLSTILSVLGKANQEALAVEVFMRAEPSAGN----TVQVYNAMMGVYA 265


>emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
          Length = 1494

 Score =  130 bits (327), Expect = 1e-28
 Identities = 68/108 (62%), Positives = 77/108 (71%)
 Frame = -1

Query: 326 RILALNPSEFVADILDSRAVQMTPTDLCFVVKTVGHVSWRRSLEVFEWLTLHRRHSPGPR 147
           RIL L   EFVAD+LD R VQMTPTD CFVVK VG  SW+R+LEV+EWL L   +SP  R
Sbjct: 162 RILGLKSEEFVADVLDDRKVQMTPTDFCFVVKWVGQSSWQRALEVYEWLNLRHWYSPNAR 221

Query: 146 LLSTILSVLGRARQTLLAEELFARCADPESNPSAIAVQVYNAMMGVYA 3
           +L+TILSVLG+A Q  LA E+FAR      N     VQVYNAMMGVYA
Sbjct: 222 MLATILSVLGKANQEALAVEIFARAEAAXGN----TVQVYNAMMGVYA 265


>ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540761|gb|EEF42321.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1429

 Score =  127 bits (319), Expect = 9e-28
 Identities = 65/108 (60%), Positives = 76/108 (70%)
 Frame = -1

Query: 326 RILALNPSEFVADILDSRAVQMTPTDLCFVVKTVGHVSWRRSLEVFEWLTLHRRHSPGPR 147
           RIL L P +FVAD+LD   VQMTPTD CFVVK VG  +W+R+LEVFEWL L   +SP  R
Sbjct: 118 RILGLRPDQFVADVLDDSKVQMTPTDFCFVVKWVGQENWQRALEVFEWLNLRHWYSPNAR 177

Query: 146 LLSTILSVLGRARQTLLAEELFARCADPESNPSAIAVQVYNAMMGVYA 3
           +L+TIL+VLG+A Q  LA E+F R      N     VQVYNAMMGVYA
Sbjct: 178 MLATILAVLGKANQEALAVEIFIRAESTVDN----TVQVYNAMMGVYA 221


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