BLASTX nr result

ID: Dioscorea21_contig00032762 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032762
         (202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20269.3| unnamed protein product [Vitis vinifera]               57   1e-06
ref|XP_002285119.1| PREDICTED: uncharacterized protein LOC100264...    57   1e-06
emb|CAN70387.1| hypothetical protein VITISV_029657 [Vitis vinifera]    57   1e-06
ref|XP_002533081.1| conserved hypothetical protein [Ricinus comm...    55   5e-06
ref|XP_002316886.1| predicted protein [Populus trichocarpa] gi|2...    55   5e-06

>emb|CBI20269.3| unnamed protein product [Vitis vinifera]
          Length = 376

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 6/56 (10%)
 Frame = +2

Query: 53  PLKQ--MPTRPPPPIFNWSHAPLP-ATMPLTMPNF---PRMAPPNNKEDTHLFLLP 202
           P KQ  +P+RPPPPIFNW    LP AT  L  PNF    R+  P+ K++TH+FLLP
Sbjct: 200 PSKQSTIPSRPPPPIFNWGQRSLPSATSMLASPNFQNSARLGFPHTKDETHMFLLP 255


>ref|XP_002285119.1| PREDICTED: uncharacterized protein LOC100264152 isoform 1 [Vitis
           vinifera]
          Length = 408

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 6/56 (10%)
 Frame = +2

Query: 53  PLKQ--MPTRPPPPIFNWSHAPLP-ATMPLTMPNF---PRMAPPNNKEDTHLFLLP 202
           P KQ  +P+RPPPPIFNW    LP AT  L  PNF    R+  P+ K++TH+FLLP
Sbjct: 215 PSKQSTIPSRPPPPIFNWGQRSLPSATSMLASPNFQNSARLGFPHTKDETHMFLLP 270


>emb|CAN70387.1| hypothetical protein VITISV_029657 [Vitis vinifera]
          Length = 400

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 6/56 (10%)
 Frame = +2

Query: 53  PLKQ--MPTRPPPPIFNWSHAPLP-ATMPLTMPNF---PRMAPPNNKEDTHLFLLP 202
           P KQ  +P+RPPPPIFNW    LP AT  L  PNF    R+  P+ K++TH+FLLP
Sbjct: 207 PSKQSTIPSRPPPPIFNWGQRSLPSATSMLASPNFQNSARLGFPHTKDETHMFLLP 262


>ref|XP_002533081.1| conserved hypothetical protein [Ricinus communis]
           gi|223527120|gb|EEF29296.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 349

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 5/55 (9%)
 Frame = +2

Query: 53  PLKQ--MPTRPPPPIFNWSHAPLP-ATMPLTMPNFP--RMAPPNNKEDTHLFLLP 202
           P KQ  +PTRPPP +FNW   PLP A   L  PNFP  R+  P  K++ H+F+LP
Sbjct: 148 PSKQSAIPTRPPPALFNWGQRPLPSAASMLASPNFPGARLGFPQAKDEPHMFILP 202


>ref|XP_002316886.1| predicted protein [Populus trichocarpa] gi|222859951|gb|EEE97498.1|
           predicted protein [Populus trichocarpa]
          Length = 394

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 29/57 (50%), Positives = 36/57 (63%), Gaps = 7/57 (12%)
 Frame = +2

Query: 53  PLKQ--MPTRPPPPIFNWSHAPLP-ATMPLTMPNF----PRMAPPNNKEDTHLFLLP 202
           P KQ  +PTRPPPP+FNWS  PLP A   L+ PNF     R+  P  K++ H+F LP
Sbjct: 214 PTKQSAIPTRPPPPLFNWSQRPLPSAASLLSSPNFQNHAARLGFPQAKDEPHMFTLP 270


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