BLASTX nr result

ID: Dioscorea21_contig00032754 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032754
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24922.3| unnamed protein product [Vitis vinifera]              111   5e-23
ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis v...   111   5e-23
ref|XP_001758663.1| predicted protein [Physcomitrella patens sub...   110   1e-22
ref|XP_001769043.1| predicted protein [Physcomitrella patens sub...   107   8e-22
ref|XP_002298421.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21

>emb|CBI24922.3| unnamed protein product [Vitis vinifera]
          Length = 1452

 Score =  111 bits (278), Expect = 5e-23
 Identities = 52/67 (77%), Positives = 62/67 (92%)
 Frame = -2

Query: 202  F*QDYREHNDDTTVHFEVILSEENMNIARQEGLEKKFKLTTTISTSNMHLFDASGVIKKY 23
            F +DY+EHNDDTTVHFEVI+SEEN+ +A+QEGL +KFKLTT ISTSNMHLFD++G IKKY
Sbjct: 941  FIKDYKEHNDDTTVHFEVIMSEENLLMAKQEGLLQKFKLTTKISTSNMHLFDSNGTIKKY 1000

Query: 22   DTPEQIL 2
            +TPEQIL
Sbjct: 1001 ETPEQIL 1007


>ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis vinifera]
          Length = 1489

 Score =  111 bits (278), Expect = 5e-23
 Identities = 52/67 (77%), Positives = 62/67 (92%)
 Frame = -2

Query: 202  F*QDYREHNDDTTVHFEVILSEENMNIARQEGLEKKFKLTTTISTSNMHLFDASGVIKKY 23
            F +DY+EHNDDTTVHFEVI+SEEN+ +A+QEGL +KFKLTT ISTSNMHLFD++G IKKY
Sbjct: 941  FIKDYKEHNDDTTVHFEVIMSEENLLMAKQEGLLQKFKLTTKISTSNMHLFDSNGTIKKY 1000

Query: 22   DTPEQIL 2
            +TPEQIL
Sbjct: 1001 ETPEQIL 1007


>ref|XP_001758663.1| predicted protein [Physcomitrella patens subsp. patens]
            gi|162690273|gb|EDQ76641.1| predicted protein
            [Physcomitrella patens subsp. patens]
          Length = 1238

 Score =  110 bits (275), Expect = 1e-22
 Identities = 54/67 (80%), Positives = 58/67 (86%)
 Frame = -2

Query: 202  F*QDYREHNDDTTVHFEVILSEENMNIARQEGLEKKFKLTTTISTSNMHLFDASGVIKKY 23
            F +D+REHN DT VHFE+ LSEENM IA  EGL KKFKLTTTISTSNMHLFDA G+IKKY
Sbjct: 941  FIKDFREHNTDTKVHFELTLSEENMAIALAEGLVKKFKLTTTISTSNMHLFDAKGIIKKY 1000

Query: 22   DTPEQIL 2
            DTPEQIL
Sbjct: 1001 DTPEQIL 1007


>ref|XP_001769043.1| predicted protein [Physcomitrella patens subsp. patens]
            gi|162679677|gb|EDQ66121.1| predicted protein
            [Physcomitrella patens subsp. patens]
          Length = 1172

 Score =  107 bits (268), Expect = 8e-22
 Identities = 53/67 (79%), Positives = 57/67 (85%)
 Frame = -2

Query: 202  F*QDYREHNDDTTVHFEVILSEENMNIARQEGLEKKFKLTTTISTSNMHLFDASGVIKKY 23
            F +D+REHN DT VHFE+ LSEENM IA  EGL KKFKLTTTISTSNMHLFD  G+IKKY
Sbjct: 940  FIKDFREHNTDTKVHFELSLSEENMAIALAEGLVKKFKLTTTISTSNMHLFDNKGIIKKY 999

Query: 22   DTPEQIL 2
            DTPEQIL
Sbjct: 1000 DTPEQIL 1006


>ref|XP_002298421.1| predicted protein [Populus trichocarpa] gi|222845679|gb|EEE83226.1|
            predicted protein [Populus trichocarpa]
          Length = 1468

 Score =  106 bits (265), Expect = 2e-21
 Identities = 52/67 (77%), Positives = 60/67 (89%)
 Frame = -2

Query: 202  F*QDYREHNDDTTVHFEVILSEENMNIARQEGLEKKFKLTTTISTSNMHLFDASGVIKKY 23
            F +D+R++ DD TV FEV+LSEENM IA+QEGL KKFKLTTTISTSNMHLFD++GVIKKY
Sbjct: 942  FIKDFRKYGDDATVVFEVLLSEENMMIAKQEGLLKKFKLTTTISTSNMHLFDSAGVIKKY 1001

Query: 22   DTPEQIL 2
            D PEQIL
Sbjct: 1002 DNPEQIL 1008


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