BLASTX nr result
ID: Dioscorea21_contig00032752
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00032752 (666 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002282466.1| PREDICTED: pentatricopeptide repeat-containi... 243 2e-62 emb|CAN64903.1| hypothetical protein VITISV_019802 [Vitis vinifera] 243 2e-62 ref|XP_002518208.1| pentatricopeptide repeat-containing protein,... 235 5e-60 ref|XP_002314516.1| predicted protein [Populus trichocarpa] gi|2... 234 1e-59 tpg|DAA60415.1| TPA: hypothetical protein ZEAMMB73_385428 [Zea m... 233 2e-59 >ref|XP_002282466.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770-like [Vitis vinifera] Length = 625 Score = 243 bits (621), Expect = 2e-62 Identities = 126/208 (60%), Positives = 157/208 (75%), Gaps = 2/208 (0%) Frame = +3 Query: 27 GREIHGFIVRNDLDSG--SDFHVRSCLIGMYSRVGRVDIGRRVFDRMTAKNVVAWTSMIG 200 GRE+H +IV+N+L G SD H+ CLI MYSR +V +GRRVFDRM +NV +WT+MI Sbjct: 248 GRELHCYIVKNELVLGLDSDVHLGCCLIDMYSRSNKVVVGRRVFDRMKCRNVFSWTAMIN 307 Query: 201 GYVENGVFEEAILLFRKMLLNRGMVPNKVTLVSVLPAVGSIASLMEGKQIHGFSIRTFST 380 GYVENG +EA+ LFR M + G+ PN+V+LVSVLPA S + L+ G+QIHGF++R Sbjct: 308 GYVENGDSDEALSLFRDMQVIDGIEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELN 367 Query: 381 SETSFNNALIDMYSKCGSLESARHVFDDISWDKDVISWSSMISCYGIHGRGGEALDLLDE 560 +E S NALIDMYSKCGSL+SAR VF+D S KD ISWSSMIS YG+HG+G EA+ L D+ Sbjct: 368 NEVSLCNALIDMYSKCGSLDSARRVFEDDSLCKDAISWSSMISGYGLHGKGQEAILLYDK 427 Query: 561 MCRNGIKLDHITSVGILSACVRSGLVKE 644 M + GI+ D IT+VGILSAC RSGLV E Sbjct: 428 MLQAGIRPDMITTVGILSACSRSGLVNE 455 Score = 99.8 bits (247), Expect = 4e-19 Identities = 63/180 (35%), Positives = 95/180 (52%), Gaps = 5/180 (2%) Frame = +3 Query: 3 PQCG---GYLRGREIHGFIVRNDLDSGSDFHVRSCLIGMYSRVGRVDIGRRVF-DRMTAK 170 P C G L GR+IHGF VR +L+ ++ + + LI MYS+ G +D RRVF D K Sbjct: 343 PACSSFSGLLSGRQIHGFAVRKELN--NEVSLCNALIDMYSKCGSLDSARRVFEDDSLCK 400 Query: 171 NVVAWTSMIGGYVENGVFEEAILLFRKMLLNRGMVPNKVTLVSVLPAVGSIASLMEGKQI 350 + ++W+SMI GY +G +EAILL+ KM L G+ P+ +T V +L A + EG I Sbjct: 401 DAISWSSMISGYGLHGKGQEAILLYDKM-LQAGIRPDMITTVGILSACSRSGLVNEGLNI 459 Query: 351 HGFSIRTFSTSET-SFNNALIDMYSKCGSLESARHVFDDISWDKDVISWSSMISCYGIHG 527 + I + T ++DM + G L+ A + + W +++SC IHG Sbjct: 460 YSSVINDYGIEPTLEIFACIVDMLGRAGQLDPALDFIKAMPVEPGPSVWGALVSCSIIHG 519 Score = 95.5 bits (236), Expect = 8e-18 Identities = 54/163 (33%), Positives = 90/163 (55%), Gaps = 3/163 (1%) Frame = +3 Query: 141 RRVFDRMTAKNVVAWTSMIGGYVENGVFEEAILLFRKMLLNRGMVPNKVTLVSVLPAVGS 320 R VFD + KNV W S+I GY +N ++ EA LF +M + ++P+ TL ++ Sbjct: 78 RLVFDSLQHKNVFLWNSLINGYAKNRLYNEAFQLFNQMC-SSDVLPDDFTLSTLSKVSSE 136 Query: 321 IASLMEGKQIHGFSIRTFSTSETSFNNALIDMYSKCGSLESARHVFDDISWDKDVISWSS 500 + +L GK IHG SIR S+T N+++ MY KCG+ E +R VFD+++ ++ SW+ Sbjct: 137 LGALFSGKSIHGKSIRIGFVSDTVVANSIMSMYCKCGNFEESRKVFDEMT-IRNSGSWNV 195 Query: 501 MISCYGIHGRGG---EALDLLDEMCRNGIKLDHITSVGILSAC 620 +I+ Y + G E + + +M + ++ D T +L C Sbjct: 196 LIAGYAVSGNCNFREETWEFVKQMQMDEVRPDAYTISSLLPLC 238 Score = 91.7 bits (226), Expect = 1e-16 Identities = 65/213 (30%), Positives = 107/213 (50%), Gaps = 8/213 (3%) Frame = +3 Query: 6 QCGGYLRGREIHGFIVRNDLDSGSDFHVRSCLIGMYSRVGRVDIGRRVFDRMTAKNVVAW 185 + G G+ IHG +R + SD V + ++ MY + G + R+VFD MT +N +W Sbjct: 136 ELGALFSGKSIHGKSIR--IGFVSDTVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGSW 193 Query: 186 TSMIGGYVENG--VFEEAILLFRKMLLNRGMVPNKVTLVSVLPAV-GSIASLMEGKQIHG 356 +I GY +G F E F K + + P+ T+ S+LP G G+++H Sbjct: 194 NVLIAGYAVSGNCNFREETWEFVKQMQMDEVRPDAYTISSLLPLCDGDKGKWDYGRELHC 253 Query: 357 FSIRTFST----SETSFNNALIDMYSKCGSLESARHVFDDISWDKDVISWSSMISCYGIH 524 + ++ S+ LIDMYS+ + R VFD + ++V SW++MI+ Y + Sbjct: 254 YIVKNELVLGLDSDVHLGCCLIDMYSRSNKVVVGRRVFDRMKC-RNVFSWTAMINGYVEN 312 Query: 525 GRGGEALDLLDEM-CRNGIKLDHITSVGILSAC 620 G EAL L +M +GI+ + ++ V +L AC Sbjct: 313 GDSDEALSLFRDMQVIDGIEPNRVSLVSVLPAC 345 >emb|CAN64903.1| hypothetical protein VITISV_019802 [Vitis vinifera] Length = 625 Score = 243 bits (621), Expect = 2e-62 Identities = 129/220 (58%), Positives = 161/220 (73%), Gaps = 6/220 (2%) Frame = +3 Query: 3 PQCGGYLR----GREIHGFIVRNDLDSG--SDFHVRSCLIGMYSRVGRVDIGRRVFDRMT 164 P C G + GRE+H +IV+N+L G SD H+ CLI MYSR +V +GRRVFDRM Sbjct: 236 PLCDGDMGKWDYGRELHCYIVKNELVLGLDSDVHLGCCLIDMYSRSNKVVVGRRVFDRMK 295 Query: 165 AKNVVAWTSMIGGYVENGVFEEAILLFRKMLLNRGMVPNKVTLVSVLPAVGSIASLMEGK 344 +NV +WT+MI GYVENG +EA+ LFR M + G+ PN+V+LVSVLPA S + L+ G+ Sbjct: 296 CRNVFSWTAMINGYVENGDSDEALSLFRDMQVIDGVEPNRVSLVSVLPACSSFSGLLSGR 355 Query: 345 QIHGFSIRTFSTSETSFNNALIDMYSKCGSLESARHVFDDISWDKDVISWSSMISCYGIH 524 QIHGF++R +E S NALIDMYSKCGSL+SAR VF+D S KD ISWSSMIS YG+H Sbjct: 356 QIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFEDDSLCKDAISWSSMISGYGLH 415 Query: 525 GRGGEALDLLDEMCRNGIKLDHITSVGILSACVRSGLVKE 644 G+G EA+ L D+M + GI+ D IT+VGILSAC RSGLV E Sbjct: 416 GKGQEAILLYDKMLQAGIRPDMITTVGILSACGRSGLVNE 455 Score = 103 bits (256), Expect = 4e-20 Identities = 65/180 (36%), Positives = 96/180 (53%), Gaps = 5/180 (2%) Frame = +3 Query: 3 PQCG---GYLRGREIHGFIVRNDLDSGSDFHVRSCLIGMYSRVGRVDIGRRVF-DRMTAK 170 P C G L GR+IHGF VR +L++ + + + LI MYS+ G +D RRVF D K Sbjct: 343 PACSSFSGLLSGRQIHGFAVRKELNN--EVSLCNALIDMYSKCGSLDSARRVFEDDSLCK 400 Query: 171 NVVAWTSMIGGYVENGVFEEAILLFRKMLLNRGMVPNKVTLVSVLPAVGSIASLMEGKQI 350 + ++W+SMI GY +G +EAILL+ KML G+ P+ +T V +L A G + EG I Sbjct: 401 DAISWSSMISGYGLHGKGQEAILLYDKML-QAGIRPDMITTVGILSACGRSGLVNEGLNI 459 Query: 351 HGFSIRTFSTSET-SFNNALIDMYSKCGSLESARHVFDDISWDKDVISWSSMISCYGIHG 527 + I + T ++DM + G L+ A I + W +++SC IHG Sbjct: 460 YSSVINDYGIEPTLEICACIVDMLGRAGQLDRALDFIKAIPVEPGPSVWGALVSCSIIHG 519 Score = 94.7 bits (234), Expect = 1e-17 Identities = 54/163 (33%), Positives = 91/163 (55%), Gaps = 3/163 (1%) Frame = +3 Query: 141 RRVFDRMTAKNVVAWTSMIGGYVENGVFEEAILLFRKMLLNRGMVPNKVTLVSVLPAVGS 320 R VFD + KNV W S+I G V+N ++ EA LF +M + ++P+ TL ++ Sbjct: 78 RLVFDSLQHKNVFLWNSLINGCVKNRLYNEAFQLFNQMC-SSDVLPDDFTLSTLSKVSSE 136 Query: 321 IASLMEGKQIHGFSIRTFSTSETSFNNALIDMYSKCGSLESARHVFDDISWDKDVISWSS 500 + +L GK IHG SIRT S+T N+++ MY KCG+ + +R VFD+++ ++ SW+ Sbjct: 137 LGALFSGKSIHGKSIRTGFVSDTVVANSIMSMYCKCGNFDESRKVFDEMT-IRNSGSWNV 195 Query: 501 MISCYGIHGRGG---EALDLLDEMCRNGIKLDHITSVGILSAC 620 +I+ Y + G E + + +M + ++ D T +L C Sbjct: 196 LIAGYAVSGNCNFREETWEFVKQMQMDEVRPDAYTISSLLPLC 238 Score = 94.4 bits (233), Expect = 2e-17 Identities = 65/213 (30%), Positives = 107/213 (50%), Gaps = 8/213 (3%) Frame = +3 Query: 6 QCGGYLRGREIHGFIVRNDLDSGSDFHVRSCLIGMYSRVGRVDIGRRVFDRMTAKNVVAW 185 + G G+ IHG +R S D V + ++ MY + G D R+VFD MT +N +W Sbjct: 136 ELGALFSGKSIHGKSIRTGFVS--DTVVANSIMSMYCKCGNFDESRKVFDEMTIRNSGSW 193 Query: 186 TSMIGGYVENG--VFEEAILLFRKMLLNRGMVPNKVTLVSVLPAV-GSIASLMEGKQIHG 356 +I GY +G F E F K + + P+ T+ S+LP G + G+++H Sbjct: 194 NVLIAGYAVSGNCNFREETWEFVKQMQMDEVRPDAYTISSLLPLCDGDMGKWDYGRELHC 253 Query: 357 FSIRTFST----SETSFNNALIDMYSKCGSLESARHVFDDISWDKDVISWSSMISCYGIH 524 + ++ S+ LIDMYS+ + R VFD + ++V SW++MI+ Y + Sbjct: 254 YIVKNELVLGLDSDVHLGCCLIDMYSRSNKVVVGRRVFDRMKC-RNVFSWTAMINGYVEN 312 Query: 525 GRGGEALDLLDEM-CRNGIKLDHITSVGILSAC 620 G EAL L +M +G++ + ++ V +L AC Sbjct: 313 GDSDEALSLFRDMQVIDGVEPNRVSLVSVLPAC 345 >ref|XP_002518208.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223542804|gb|EEF44341.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 506 Score = 235 bits (600), Expect = 5e-60 Identities = 120/209 (57%), Positives = 153/209 (73%), Gaps = 3/209 (1%) Frame = +3 Query: 27 GREIHGFIVRNDLDSG---SDFHVRSCLIGMYSRVGRVDIGRRVFDRMTAKNVVAWTSMI 197 GRE+HGFIVRN+LD G SD H+ SCLI MYSR+ RV+ ++FD+M +NV WT+MI Sbjct: 252 GRELHGFIVRNELDLGCLGSDVHLGSCLIDMYSRINRVEKCMQLFDQMKRRNVYVWTAMI 311 Query: 198 GGYVENGVFEEAILLFRKMLLNRGMVPNKVTLVSVLPAVGSIASLMEGKQIHGFSIRTFS 377 GYV+NG EEA+ LF +M G+ PN+VTLVSVLP S+A L GKQIHG++IR Sbjct: 312 NGYVQNGALEEALTLFHEMQAKDGVEPNRVTLVSVLPICSSLAGLPGGKQIHGYAIRKRL 371 Query: 378 TSETSFNNALIDMYSKCGSLESARHVFDDISWDKDVISWSSMISCYGIHGRGGEALDLLD 557 + S +NALIDMYSKCGSL AR VFD+ ++ +D ISWSS+IS YG+HG+G EA+ L D Sbjct: 372 NFDASLSNALIDMYSKCGSLNYARRVFDNGTFRRDAISWSSIISGYGLHGKGEEAVFLYD 431 Query: 558 EMCRNGIKLDHITSVGILSACVRSGLVKE 644 +M + G K D IT +G++SAC RSGLV E Sbjct: 432 KMLQLGNKPDQITVIGVISACGRSGLVYE 460 Score = 91.3 bits (225), Expect = 2e-16 Identities = 58/189 (30%), Positives = 98/189 (51%), Gaps = 3/189 (1%) Frame = +3 Query: 63 LDSGSDFHVRSCLIGMYSRVGRVDIGRRVFDRMTAKNVVAWTSMIGGYVENGVFEEAILL 242 +D + + + LI Y+ G + VF+ + K+V W S+I GYV+N E+ L Sbjct: 56 MDFSQNPFIATKLISAYAICGVPTASKLVFNSLEVKSVPLWNSLISGYVKNQENTESFSL 115 Query: 243 FRKMLLNRGMVPNKVTLVSVLPAVGSIASLMEGKQIHGFSIRTFSTSETSFNNALIDMYS 422 F +M + G++P+ TL ++ G I L+ GK IHG S++ +T N+L+ MY Sbjct: 116 FCQMC-SFGVLPDDYTLATLSKVCGEIGHLIAGKIIHGLSLKIGFVLDTVVANSLMSMYC 174 Query: 423 KCGSLESARHVFDDISWDKDVISWSSMISCY---GIHGRGGEALDLLDEMCRNGIKLDHI 593 KCG A +FD++ ++ V SW+ +I+ Y G + +DL+ +M +G K + Sbjct: 175 KCGEFSEALKLFDEMP-ERSVGSWNVVIAGYSDSGDRNLNQQIVDLVKDMQIDGFKPNAF 233 Query: 594 TSVGILSAC 620 T +L C Sbjct: 234 TVSSLLVLC 242 >ref|XP_002314516.1| predicted protein [Populus trichocarpa] gi|222863556|gb|EEF00687.1| predicted protein [Populus trichocarpa] Length = 632 Score = 234 bits (596), Expect = 1e-59 Identities = 121/218 (55%), Positives = 159/218 (72%), Gaps = 6/218 (2%) Frame = +3 Query: 9 CGGYL----RGREIHGFIVRNDL--DSGSDFHVRSCLIGMYSRVGRVDIGRRVFDRMTAK 170 C G++ GRE+HGFIVR +L SG++ H+ CLI MYSR RVD+GRRVFDRM + Sbjct: 242 CNGHMGKRDHGRELHGFIVRIELAVGSGTEVHLGCCLIDMYSRSNRVDVGRRVFDRMECR 301 Query: 171 NVVAWTSMIGGYVENGVFEEAILLFRKMLLNRGMVPNKVTLVSVLPAVGSIASLMEGKQI 350 NV AWT+MI G+V+NG EE ++LF +M + G+ PNKV+LVSVLPA ++A L KQI Sbjct: 302 NVYAWTAMINGHVQNGALEEGLVLFHEMQVRDGVEPNKVSLVSVLPACSAVAGLTGVKQI 361 Query: 351 HGFSIRTFSTSETSFNNALIDMYSKCGSLESARHVFDDISWDKDVISWSSMISCYGIHGR 530 HG++IR ++ S NALIDMYSKCGSL+ A+ VF+ S+ +D ISWSSMIS YG+HG+ Sbjct: 362 HGYAIRKQFNNDVSLCNALIDMYSKCGSLDHAKQVFEFGSFRRDPISWSSMISGYGLHGK 421 Query: 531 GGEALDLLDEMCRNGIKLDHITSVGILSACVRSGLVKE 644 G EA+ + ++M + G K D IT VG+LSAC R+GLV E Sbjct: 422 GEEAVFVYNKMLQLGNKPDMITIVGVLSACSRAGLVDE 459 Score = 88.2 bits (217), Expect = 1e-15 Identities = 65/215 (30%), Positives = 112/215 (52%), Gaps = 10/215 (4%) Frame = +3 Query: 6 QCGGYLRGREIHGFIVRNDLDSGS--DFHVRSCLIGMYSRVGRVDIGRRVFDRMTAKNVV 179 + G G+ IHG L +G D V + L+ MYS+ G ++FD M +NV Sbjct: 140 EIGDLNAGKLIHG----KSLKTGFVLDVIVANSLMSMYSKCGGFGECLKLFDEMPERNVG 195 Query: 180 AWTSMIGGYVENG--VFEEAILLFRKMLLNRGMVPNKVTLVSVLPAV-GSIASLMEGKQI 350 +W ++ GY ++G F++ + F K + G+ P+ T+ S+L G + G+++ Sbjct: 196 SWNVILSGYADSGDRNFDKEVSGFVKDMQIEGLKPDAFTVSSLLTLCNGHMGKRDHGREL 255 Query: 351 HGFSIR----TFSTSETSFNNALIDMYSKCGSLESARHVFDDISWDKDVISWSSMISCYG 518 HGF +R S +E LIDMYS+ ++ R VFD + ++V +W++MI+ + Sbjct: 256 HGFIVRIELAVGSGTEVHLGCCLIDMYSRSNRVDVGRRVFDRMEC-RNVYAWTAMINGHV 314 Query: 519 IHGRGGEALDLLDEM-CRNGIKLDHITSVGILSAC 620 +G E L L EM R+G++ + ++ V +L AC Sbjct: 315 QNGALEEGLVLFHEMQVRDGVEPNKVSLVSVLPAC 349 Score = 87.8 bits (216), Expect = 2e-15 Identities = 57/177 (32%), Positives = 90/177 (50%), Gaps = 3/177 (1%) Frame = +3 Query: 99 LIGMYSRVGRVDIGRRVFDRMTAKNVVAWTSMIGGYVENGVFEEAILLFRKMLLNRGMVP 278 LI Y+ G + R VFD + K+V W S+I G+V+N + EA F +M RG++ Sbjct: 68 LISAYAIFGVPALSRLVFDSLHFKSVYLWNSLINGFVKNRAYNEAFGWFYQMCC-RGVLL 126 Query: 279 NKVTLVSVLPAVGSIASLMEGKQIHGFSIRTFSTSETSFNNALIDMYSKCGSLESARHVF 458 + TL ++ I L GK IHG S++T + N+L+ MYSKCG +F Sbjct: 127 DDYTLATMSKVCHEIGDLNAGKLIHGKSLKTGFVLDVIVANSLMSMYSKCGGFGECLKLF 186 Query: 459 DDISWDKDVISWSSMISCYGIHGRGG---EALDLLDEMCRNGIKLDHITSVGILSAC 620 D++ +++V SW+ ++S Y G E + +M G+K D T +L+ C Sbjct: 187 DEMP-ERNVGSWNVILSGYADSGDRNFDKEVSGFVKDMQIEGLKPDAFTVSSLLTLC 242 Score = 77.0 bits (188), Expect = 3e-12 Identities = 49/168 (29%), Positives = 87/168 (51%), Gaps = 2/168 (1%) Frame = +3 Query: 30 REIHGFIVRNDLDSGSDFHVRSCLIGMYSRVGRVDIGRRVFDRMT-AKNVVAWTSMIGGY 206 ++IHG+ +R ++ D + + LI MYS+ G +D ++VF+ + ++ ++W+SMI GY Sbjct: 359 KQIHGYAIRKQFNN--DVSLCNALIDMYSKCGSLDHAKQVFEFGSFRRDPISWSSMISGY 416 Query: 207 VENGVFEEAILLFRKMLLNRGMVPNKVTLVSVLPAVGSIASLMEGKQIHGFSIRTFSTSE 386 +G EEA+ ++ KML G P+ +T+V VL A + EG I+ +I + Sbjct: 417 GLHGKGEEAVFVYNKML-QLGNKPDMITIVGVLSACSRAGLVDEGLCIYKSAINKYRIKP 475 Query: 387 T-SFNNALIDMYSKCGSLESARHVFDDISWDKDVISWSSMISCYGIHG 527 T ++DM + G L A + + W +++S IHG Sbjct: 476 TVEICACVVDMLGRSGQLGQALDYIKTMPMEPSPSVWGAVVSASIIHG 523 >tpg|DAA60415.1| TPA: hypothetical protein ZEAMMB73_385428 [Zea mays] Length = 504 Score = 233 bits (594), Expect = 2e-59 Identities = 111/212 (52%), Positives = 149/212 (70%) Frame = +3 Query: 3 PQCGGYLRGREIHGFIVRNDLDSGSDFHVRSCLIGMYSRVGRVDIGRRVFDRMTAKNVVA 182 P C GRE+H + VR+ + DFHV S L+ MY RVG D R VF+RM +NVV Sbjct: 164 PVCTSARWGRELHCYAVRDWMCGDDDFHVSSGLVSMYCRVGHPDSARTVFNRMARRNVVC 223 Query: 183 WTSMIGGYVENGVFEEAILLFRKMLLNRGMVPNKVTLVSVLPAVGSIASLMEGKQIHGFS 362 WT+M+GGY+ENG+F++A+ FR M L + PN++TL++VL A+ +++SL EGKQ+HGF+ Sbjct: 224 WTAMVGGYIENGMFDDAVDCFRAMWLIDAIPPNRITLITVLSAIEALSSLAEGKQVHGFA 283 Query: 363 IRTFSTSETSFNNALIDMYSKCGSLESARHVFDDISWDKDVISWSSMISCYGIHGRGGEA 542 +R +E S NNALID Y+KCG+L AR +FDD SW KDVISW +MI YGIHG G EA Sbjct: 284 VRMMMHAEMSLNNALIDTYAKCGALHYARRIFDDTSWCKDVISWGAMILGYGIHGMGVEA 343 Query: 543 LDLLDEMCRNGIKLDHITSVGILSACVRSGLV 638 + L D+M +G+K D I +G+LSAC +GLV Sbjct: 344 VALFDQMLSSGVKPDSIIGLGVLSACCHAGLV 375