BLASTX nr result

ID: Dioscorea21_contig00032748 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032748
         (526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304264.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
ref|XP_004155062.1| PREDICTED: pentatricopeptide repeat-containi...    90   2e-16
ref|XP_003572243.1| PREDICTED: pentatricopeptide repeat-containi...    90   2e-16
ref|XP_002877566.1| pentatricopeptide repeat-containing protein ...    89   3e-16
ref|XP_002445550.1| hypothetical protein SORBIDRAFT_07g021340 [S...    89   3e-16

>ref|XP_002304264.1| predicted protein [Populus trichocarpa] gi|222841696|gb|EEE79243.1|
           predicted protein [Populus trichocarpa]
          Length = 499

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 35/48 (72%), Positives = 41/48 (85%)
 Frame = -1

Query: 526 IAKNLRTCIDCHTFSKVLSSVYNRVVVIRDRSRFHHFKDGHCSCNDYW 383
           IAKNLR C+DCH F+K+LS VYNR V+I D +RFHHF+ GHCSCNDYW
Sbjct: 452 IAKNLRICVDCHNFAKILSGVYNRQVIITDHTRFHHFRGGHCSCNDYW 499


>ref|XP_004155062.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g47530-like [Cucumis sativus]
          Length = 602

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 35/48 (72%), Positives = 43/48 (89%)
 Frame = -1

Query: 526 IAKNLRTCIDCHTFSKVLSSVYNRVVVIRDRSRFHHFKDGHCSCNDYW 383
           IA N+RTC+DCH F+K +SSVYNR VV+RDRSRFHHF++G CSCND+W
Sbjct: 555 IANNIRTCMDCHNFAKYISSVYNRKVVVRDRSRFHHFQEGRCSCNDFW 602


>ref|XP_003572243.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g47530-like [Brachypodium distachyon]
          Length = 884

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 34/48 (70%), Positives = 41/48 (85%)
 Frame = -1

Query: 526 IAKNLRTCIDCHTFSKVLSSVYNRVVVIRDRSRFHHFKDGHCSCNDYW 383
           +AKNLR C+DCH F+KV S VYNR+V++RDR+RFHHF  G CSCNDYW
Sbjct: 837 LAKNLRVCVDCHNFTKVFSGVYNRLVIVRDRTRFHHFNGGQCSCNDYW 884


>ref|XP_002877566.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297323404|gb|EFH53825.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 591

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 34/48 (70%), Positives = 42/48 (87%)
 Frame = -1

Query: 526 IAKNLRTCIDCHTFSKVLSSVYNRVVVIRDRSRFHHFKDGHCSCNDYW 383
           + KNLRTC+DCH F+K +S VY+RVV++RDRSRFHHFK G CSCND+W
Sbjct: 544 VTKNLRTCVDCHNFAKFVSDVYDRVVIVRDRSRFHHFKGGSCSCNDFW 591


>ref|XP_002445550.1| hypothetical protein SORBIDRAFT_07g021340 [Sorghum bicolor]
           gi|241941900|gb|EES15045.1| hypothetical protein
           SORBIDRAFT_07g021340 [Sorghum bicolor]
          Length = 595

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 33/48 (68%), Positives = 42/48 (87%)
 Frame = -1

Query: 526 IAKNLRTCIDCHTFSKVLSSVYNRVVVIRDRSRFHHFKDGHCSCNDYW 383
           +AKNLR C+DCH F+KV S +YNR+V++RDR+RFHHF+ G CSCNDYW
Sbjct: 548 LAKNLRVCVDCHNFTKVFSGIYNRLVIVRDRTRFHHFQGGKCSCNDYW 595


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