BLASTX nr result

ID: Dioscorea21_contig00032723 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032723
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68178.1| hypothetical protein VITISV_000846 [Vitis vinifera]   127   1e-27
emb|CBI39152.3| unnamed protein product [Vitis vinifera]              126   2e-27
ref|XP_002267783.1| PREDICTED: pentatricopeptide repeat-containi...   126   2e-27
ref|XP_004137888.1| PREDICTED: pentatricopeptide repeat-containi...   112   2e-23
ref|XP_003609024.1| Pentatricopeptide repeat-containing protein ...   112   3e-23

>emb|CAN68178.1| hypothetical protein VITISV_000846 [Vitis vinifera]
          Length = 633

 Score =  127 bits (319), Expect = 1e-27
 Identities = 60/86 (69%), Positives = 70/86 (81%)
 Frame = +2

Query: 2   MKHVTSWNAMIVSLAVHGHCEEALELFSCMEKENNRVVKPNNVTFLGVLTACSHKGLVKE 181
           MKH++ WNAMIVSLAVHG+CEEAL LFS ME   +   +PN VTF+GVL ACSHKGLV E
Sbjct: 345 MKHISCWNAMIVSLAVHGYCEEALRLFSTMEMSVDGA-RPNRVTFIGVLIACSHKGLVDE 403

Query: 182 GQEFFDRMIRVYGIEPDIKHYGCMVD 259
           G++FF+RM+  Y I PDIKHYGCMVD
Sbjct: 404 GRKFFNRMVNEYKIMPDIKHYGCMVD 429


>emb|CBI39152.3| unnamed protein product [Vitis vinifera]
          Length = 253

 Score =  126 bits (317), Expect = 2e-27
 Identities = 60/86 (69%), Positives = 69/86 (80%)
 Frame = +2

Query: 2   MKHVTSWNAMIVSLAVHGHCEEALELFSCMEKENNRVVKPNNVTFLGVLTACSHKGLVKE 181
           MKH++ WNAMIVSLAVHG+CEEAL LFS ME   +   +PN VTF+GVL ACSHKGLV E
Sbjct: 19  MKHISCWNAMIVSLAVHGYCEEALRLFSTMEMSVDGA-RPNRVTFIGVLIACSHKGLVDE 77

Query: 182 GQEFFDRMIRVYGIEPDIKHYGCMVD 259
           G+ FF+RM+  Y I PDIKHYGCMVD
Sbjct: 78  GRTFFNRMVNEYKIMPDIKHYGCMVD 103


>ref|XP_002267783.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Vitis vinifera]
          Length = 636

 Score =  126 bits (317), Expect = 2e-27
 Identities = 60/86 (69%), Positives = 69/86 (80%)
 Frame = +2

Query: 2   MKHVTSWNAMIVSLAVHGHCEEALELFSCMEKENNRVVKPNNVTFLGVLTACSHKGLVKE 181
           MKH++ WNAMIVSLAVHG+CEEAL LFS ME   +   +PN VTF+GVL ACSHKGLV E
Sbjct: 451 MKHISCWNAMIVSLAVHGYCEEALRLFSTMEMSVDGA-RPNRVTFIGVLIACSHKGLVDE 509

Query: 182 GQEFFDRMIRVYGIEPDIKHYGCMVD 259
           G+ FF+RM+  Y I PDIKHYGCMVD
Sbjct: 510 GRTFFNRMVNEYKIMPDIKHYGCMVD 535


>ref|XP_004137888.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15300-like [Cucumis sativus]
           gi|449521725|ref|XP_004167880.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g15300-like [Cucumis sativus]
          Length = 521

 Score =  112 bits (281), Expect = 2e-23
 Identities = 51/86 (59%), Positives = 64/86 (74%)
 Frame = +2

Query: 2   MKHVTSWNAMIVSLAVHGHCEEALELFSCMEKENNRVVKPNNVTFLGVLTACSHKGLVKE 181
           MK V+ WNAMI+ LAVHGHCE ALE+F  M+ E+    KPN +TF+ +L ACSHKGL+ E
Sbjct: 339 MKPVSCWNAMIMGLAVHGHCERALEMFDSMKAEDGDH-KPNRITFIALLIACSHKGLLAE 397

Query: 182 GQEFFDRMIRVYGIEPDIKHYGCMVD 259
           G+ FF  M+  Y I PD+KHYGCM+D
Sbjct: 398 GRHFFSLMVTKYKIMPDLKHYGCMID 423


>ref|XP_003609024.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355510079|gb|AES91221.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 544

 Score =  112 bits (280), Expect = 3e-23
 Identities = 49/86 (56%), Positives = 65/86 (75%)
 Frame = +2

Query: 2   MKHVTSWNAMIVSLAVHGHCEEALELFSCMEKENNRVVKPNNVTFLGVLTACSHKGLVKE 181
           MK V+ WNAM++ LAVHG+CEE  +LF+ ME+     ++P+ VTF+GVL ACSHKGLV +
Sbjct: 352 MKTVSCWNAMVIGLAVHGYCEEVFQLFTEMEESLGGSIRPDRVTFIGVLVACSHKGLVDK 411

Query: 182 GQEFFDRMIRVYGIEPDIKHYGCMVD 259
            + +FD M++ Y I PD KHYGCMVD
Sbjct: 412 ARWYFDHMVKRYKIVPDSKHYGCMVD 437


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