BLASTX nr result

ID: Dioscorea21_contig00032708 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032708
         (525 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330437.1| predicted protein [Populus trichocarpa] gi|2...   223   1e-56
emb|CBI27690.3| unnamed protein product [Vitis vinifera]              218   6e-55
ref|XP_002268418.1| PREDICTED: E3 ubiquitin-protein ligase CHFR-...   218   6e-55
gb|AAX95797.1| At1g47570 [Oryza sativa Japonica Group] gi|775489...   213   1e-53
ref|NP_001065879.2| Os11g0175500 [Oryza sativa Japonica Group] g...   213   1e-53

>ref|XP_002330437.1| predicted protein [Populus trichocarpa] gi|222871849|gb|EEF08980.1|
           predicted protein [Populus trichocarpa]
          Length = 465

 Score =  223 bits (569), Expect = 1e-56
 Identities = 93/143 (65%), Positives = 119/143 (83%)
 Frame = +2

Query: 5   ICPHETFKPVVDHSILRIPDSAHNNNRYERDVTEKCIQHTGKTFQAVISEWIMKFVNKEI 184
           IC HE FKP+ +H++ RIP  AH  NR+E+D+TE+CI   GKT Q VIS+WI K  N+EI
Sbjct: 321 ICSHENFKPISEHAVSRIPFLAHEKNRHEQDITERCIGQMGKTLQDVISDWIGKLNNREI 380

Query: 185 DRSRLQLNHAEMISERTHLCRGCYDKLVDYLLYWFRVSLPRHLIPPDALVREDCWYGYSC 364
           DRSR+ LNHAEMI+  TH+C  CYDKL+ +LLYWFR+S+PR+L+PP+A  REDCWYGY+C
Sbjct: 381 DRSRMPLNHAEMITVGTHVCNDCYDKLISFLLYWFRISMPRNLLPPEAANREDCWYGYAC 440

Query: 365 RTQHHSDEHARRRNHVCRPTRGS 433
           RTQHH+++HAR+RNHVCRPTRG+
Sbjct: 441 RTQHHNEDHARKRNHVCRPTRGN 463


>emb|CBI27690.3| unnamed protein product [Vitis vinifera]
          Length = 1150

 Score =  218 bits (554), Expect = 6e-55
 Identities = 92/143 (64%), Positives = 119/143 (83%)
 Frame = +2

Query: 5    ICPHETFKPVVDHSILRIPDSAHNNNRYERDVTEKCIQHTGKTFQAVISEWIMKFVNKEI 184
            +C HETFKP+ DH+I RIP  AH NN +E+++TE+CI+  GKT Q VISE +++  N+EI
Sbjct: 1006 VCCHETFKPISDHTISRIPTLAHENNWHEQNITERCIRQMGKTLQDVISELLIRLSNREI 1065

Query: 185  DRSRLQLNHAEMISERTHLCRGCYDKLVDYLLYWFRVSLPRHLIPPDALVREDCWYGYSC 364
            DR+R+QLNH+EMI+  T++C  CYDKLV +LLYWFRVS+P+  +PPDA  REDCWYGY+C
Sbjct: 1066 DRTRMQLNHSEMITASTYVCNECYDKLVSFLLYWFRVSMPKSFLPPDASKREDCWYGYAC 1125

Query: 365  RTQHHSDEHARRRNHVCRPTRGS 433
            RTQ H++EHAR+RNHVCRPTRGS
Sbjct: 1126 RTQQHNEEHARKRNHVCRPTRGS 1148


>ref|XP_002268418.1| PREDICTED: E3 ubiquitin-protein ligase CHFR-like [Vitis vinifera]
          Length = 462

 Score =  218 bits (554), Expect = 6e-55
 Identities = 92/143 (64%), Positives = 119/143 (83%)
 Frame = +2

Query: 5   ICPHETFKPVVDHSILRIPDSAHNNNRYERDVTEKCIQHTGKTFQAVISEWIMKFVNKEI 184
           +C HETFKP+ DH+I RIP  AH NN +E+++TE+CI+  GKT Q VISE +++  N+EI
Sbjct: 318 VCCHETFKPISDHTISRIPTLAHENNWHEQNITERCIRQMGKTLQDVISELLIRLSNREI 377

Query: 185 DRSRLQLNHAEMISERTHLCRGCYDKLVDYLLYWFRVSLPRHLIPPDALVREDCWYGYSC 364
           DR+R+QLNH+EMI+  T++C  CYDKLV +LLYWFRVS+P+  +PPDA  REDCWYGY+C
Sbjct: 378 DRTRMQLNHSEMITASTYVCNECYDKLVSFLLYWFRVSMPKSFLPPDASKREDCWYGYAC 437

Query: 365 RTQHHSDEHARRRNHVCRPTRGS 433
           RTQ H++EHAR+RNHVCRPTRGS
Sbjct: 438 RTQQHNEEHARKRNHVCRPTRGS 460


>gb|AAX95797.1| At1g47570 [Oryza sativa Japonica Group] gi|77548913|gb|ABA91710.1|
           Zinc finger, C3HC4 type family protein, expressed [Oryza
           sativa Japonica Group] gi|215678703|dbj|BAG95140.1|
           unnamed protein product [Oryza sativa Japonica Group]
          Length = 478

 Score =  213 bits (543), Expect = 1e-53
 Identities = 88/143 (61%), Positives = 113/143 (79%)
 Frame = +2

Query: 5   ICPHETFKPVVDHSILRIPDSAHNNNRYERDVTEKCIQHTGKTFQAVISEWIMKFVNKEI 184
           IC  ETFK +    I  +PD+ H  N+YE+D+TE+CIQ +GK  QA+ISEWI+KF NKE+
Sbjct: 335 ICDQETFKMISQRHISSVPDTVHGGNQYEKDITERCIQQSGKALQAIISEWIVKFDNKEL 394

Query: 185 DRSRLQLNHAEMISERTHLCRGCYDKLVDYLLYWFRVSLPRHLIPPDALVREDCWYGYSC 364
           DRSRLQLNH + I+ RT++C  CY K +D+LLYWFRVS+PR+L+PPDA  RE CWYG+ C
Sbjct: 395 DRSRLQLNHVDAITSRTYVCNQCYSKFIDFLLYWFRVSMPRNLLPPDAANRESCWYGFMC 454

Query: 365 RTQHHSDEHARRRNHVCRPTRGS 433
           RTQHH  +HA++ NHVCRPTRG+
Sbjct: 455 RTQHHRPDHAKKLNHVCRPTRGN 477


>ref|NP_001065879.2| Os11g0175500 [Oryza sativa Japonica Group]
           gi|62733685|gb|AAX95796.1| At1g47570 [Oryza sativa
           Japonica Group] gi|77548912|gb|ABA91709.1| Zinc finger,
           C3HC4 type family protein, expressed [Oryza sativa
           Japonica Group] gi|255679842|dbj|BAF27724.2|
           Os11g0175500 [Oryza sativa Japonica Group]
          Length = 508

 Score =  213 bits (543), Expect = 1e-53
 Identities = 88/143 (61%), Positives = 113/143 (79%)
 Frame = +2

Query: 5   ICPHETFKPVVDHSILRIPDSAHNNNRYERDVTEKCIQHTGKTFQAVISEWIMKFVNKEI 184
           IC  ETFK +    I  +PD+ H  N+YE+D+TE+CIQ +GK  QA+ISEWI+KF NKE+
Sbjct: 365 ICDQETFKMISQRHISSVPDTVHGGNQYEKDITERCIQQSGKALQAIISEWIVKFDNKEL 424

Query: 185 DRSRLQLNHAEMISERTHLCRGCYDKLVDYLLYWFRVSLPRHLIPPDALVREDCWYGYSC 364
           DRSRLQLNH + I+ RT++C  CY K +D+LLYWFRVS+PR+L+PPDA  RE CWYG+ C
Sbjct: 425 DRSRLQLNHVDAITSRTYVCNQCYSKFIDFLLYWFRVSMPRNLLPPDAANRESCWYGFMC 484

Query: 365 RTQHHSDEHARRRNHVCRPTRGS 433
           RTQHH  +HA++ NHVCRPTRG+
Sbjct: 485 RTQHHRPDHAKKLNHVCRPTRGN 507


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