BLASTX nr result

ID: Dioscorea21_contig00032687 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032687
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK45991.1| unknown [Lotus japonicus]                               63   3e-08
dbj|BAJ92423.1| predicted protein [Hordeum vulgare subsp. vulgar...    62   4e-08
ref|XP_002451473.1| hypothetical protein SORBIDRAFT_04g002490 [S...    59   4e-07
ref|NP_001168856.1| uncharacterized protein LOC100382661 [Zea ma...    59   4e-07
ref|XP_002319747.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07

>gb|AFK45991.1| unknown [Lotus japonicus]
          Length = 310

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 28/41 (68%), Positives = 36/41 (87%)
 Frame = +2

Query: 179 STATTRPAVILPGLGNNTGDYQRLVSTLGEAHGIPSVVAKV 301
           S++T RPAVILPGLGNN+GDYQ+L  TL + +G+P+VVAKV
Sbjct: 26  SSSTYRPAVILPGLGNNSGDYQKLEQTLNDKYGVPTVVAKV 66


>dbj|BAJ92423.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326523493|dbj|BAJ92917.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 306

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 29/40 (72%), Positives = 33/40 (82%)
 Frame = +2

Query: 182 TATTRPAVILPGLGNNTGDYQRLVSTLGEAHGIPSVVAKV 301
           TA  RPAVILPGLGNNTGDY RL + L + HG+PSVVA+V
Sbjct: 20  TAPRRPAVILPGLGNNTGDYARLGAALRDGHGVPSVVARV 59


>ref|XP_002451473.1| hypothetical protein SORBIDRAFT_04g002490 [Sorghum bicolor]
           gi|241931304|gb|EES04449.1| hypothetical protein
           SORBIDRAFT_04g002490 [Sorghum bicolor]
          Length = 312

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 32/49 (65%), Positives = 38/49 (77%), Gaps = 1/49 (2%)
 Frame = +2

Query: 158 AVAGTTISTATTRPAVILPGLGNNTGDYQRLVSTLGEAHGIP-SVVAKV 301
           A AG T + AT RPAVILPGLGNNTGDY RL + L + HG+P +VVA+V
Sbjct: 19  ANAGAT-APATARPAVILPGLGNNTGDYARLAAALRDDHGLPAAVVARV 66


>ref|NP_001168856.1| uncharacterized protein LOC100382661 [Zea mays]
           gi|223973357|gb|ACN30866.1| unknown [Zea mays]
          Length = 310

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 31/47 (65%), Positives = 37/47 (78%), Gaps = 1/47 (2%)
 Frame = +2

Query: 164 AGTTISTATTRPAVILPGLGNNTGDYQRLVSTLGEAHGIP-SVVAKV 301
           A  T+S AT RPAVILPGLGNNTGDY RL + L + HG+P +VVA+V
Sbjct: 17  ASATVS-ATARPAVILPGLGNNTGDYARLAAALRDDHGLPAAVVARV 62


>ref|XP_002319747.1| predicted protein [Populus trichocarpa] gi|222858123|gb|EEE95670.1|
           predicted protein [Populus trichocarpa]
          Length = 310

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 32/43 (74%), Positives = 36/43 (83%), Gaps = 1/43 (2%)
 Frame = +2

Query: 176 ISTATT-RPAVILPGLGNNTGDYQRLVSTLGEAHGIPSVVAKV 301
           IST T  RPAVILPGLGNNTGDYQ+L  TL E +G+P+VVAKV
Sbjct: 24  ISTVTAIRPAVILPGLGNNTGDYQKLEVTLQE-YGVPTVVAKV 65


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