BLASTX nr result

ID: Dioscorea21_contig00032659 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032659
         (496 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298685.1| predicted protein [Populus trichocarpa] gi|2...   179   3e-43
ref|XP_002328898.1| predicted protein [Populus trichocarpa] gi|2...   177   6e-43
ref|XP_002518056.1| methionine-tRNA synthetase, putative [Ricinu...   172   1e-42
ref|XP_003607419.1| Methionyl-tRNA synthetase [Medicago truncatu...   177   1e-42
emb|CBI17224.3| unnamed protein product [Vitis vinifera]              177   1e-42

>ref|XP_002298685.1| predicted protein [Populus trichocarpa] gi|222845943|gb|EEE83490.1|
           predicted protein [Populus trichocarpa]
          Length = 805

 Score =  179 bits (453), Expect = 3e-43
 Identities = 85/118 (72%), Positives = 101/118 (85%)
 Frame = +2

Query: 143 IFISRLDFRVGIIKKVWEHPNADSLYVEEIDVGEESSRTTVSGLVNHVPMEQMQDRKVCV 322
           I I+RLD RVG+IKK  +HP+ADSLYVEEID+GE   RT VSGLV ++P+E+MQ+RKVC+
Sbjct: 642 ISITRLDIRVGLIKKAQKHPDADSLYVEEIDLGEGDCRTVVSGLVKYIPLEEMQNRKVCI 701

Query: 323 LCNLKPVNMRGVKSHAMVLAAFNYDHSKVELVDPPALAVVGERVTFPGFPGKPDTVIN 496
           LCNLKP NMRG+KS AMVLAA + DH+KVELVDPP  AVVGERVTFPGF G+PD V+N
Sbjct: 702 LCNLKPANMRGIKSEAMVLAASSSDHTKVELVDPPQSAVVGERVTFPGFEGEPDDVLN 759


>ref|XP_002328898.1| predicted protein [Populus trichocarpa] gi|222839328|gb|EEE77665.1|
           predicted protein [Populus trichocarpa]
          Length = 801

 Score =  177 bits (450), Expect = 6e-43
 Identities = 86/118 (72%), Positives = 101/118 (85%)
 Frame = +2

Query: 143 IFISRLDFRVGIIKKVWEHPNADSLYVEEIDVGEESSRTTVSGLVNHVPMEQMQDRKVCV 322
           I I+RLD RVG+IKKV +HP+ADSLYVEEID+GE   RT VSGLV ++P+E+MQ+RKVCV
Sbjct: 638 ISITRLDIRVGLIKKVQKHPDADSLYVEEIDLGEGDCRTVVSGLVKYIPLEEMQNRKVCV 697

Query: 323 LCNLKPVNMRGVKSHAMVLAAFNYDHSKVELVDPPALAVVGERVTFPGFPGKPDTVIN 496
           LCNLKP +MRG+KS AMVLAA N DH+KVELVDPP  AVVGERVTF GF G+PD V+N
Sbjct: 698 LCNLKPASMRGIKSQAMVLAASNSDHTKVELVDPPPSAVVGERVTFQGFEGEPDDVLN 755


>ref|XP_002518056.1| methionine-tRNA synthetase, putative [Ricinus communis]
           gi|223542652|gb|EEF44189.1| methionine-tRNA synthetase,
           putative [Ricinus communis]
          Length = 678

 Score =  172 bits (437), Expect(2) = 1e-42
 Identities = 86/118 (72%), Positives = 100/118 (84%)
 Frame = +2

Query: 143 IFISRLDFRVGIIKKVWEHPNADSLYVEEIDVGEESSRTTVSGLVNHVPMEQMQDRKVCV 322
           I ISRLD RVG+IKK  +HP+ADSLYVEEID+G E+ RT VSGLV ++P+E+MQ+RKVCV
Sbjct: 516 ISISRLDIRVGLIKKAQKHPDADSLYVEEIDLGVET-RTVVSGLVKYIPLEEMQNRKVCV 574

Query: 323 LCNLKPVNMRGVKSHAMVLAAFNYDHSKVELVDPPALAVVGERVTFPGFPGKPDTVIN 496
           LCNLKP  MRG+KS AMVLAA N DH+KVELVDPP  AVVGERVTFPGF G+ D V+N
Sbjct: 575 LCNLKPATMRGIKSQAMVLAASNSDHTKVELVDPPESAVVGERVTFPGFEGESDGVLN 632



 Score = 25.8 bits (55), Expect(2) = 1e-42
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = +1

Query: 1   GSQAASGDTDGNDIIDQLKSTGVSGNEEKQQETPAHNNDAKSKA 132
           GSQA   + +   + +++  T +S    K+Q+T      A SK+
Sbjct: 467 GSQAERAEAEAAQVAEKMSKTKISDGGGKKQQTKKPAAQANSKS 510


>ref|XP_003607419.1| Methionyl-tRNA synthetase [Medicago truncatula]
            gi|355508474|gb|AES89616.1| Methionyl-tRNA synthetase
            [Medicago truncatula]
          Length = 919

 Score =  177 bits (448), Expect = 1e-42
 Identities = 82/118 (69%), Positives = 102/118 (86%)
 Frame = +2

Query: 143  IFISRLDFRVGIIKKVWEHPNADSLYVEEIDVGEESSRTTVSGLVNHVPMEQMQDRKVCV 322
            I I+RLD RVG+IKK  +HP+ADSLYVEEIDVGEE +RT VSGLV ++P+++MQ+RKVCV
Sbjct: 756  ITITRLDIRVGLIKKAEKHPDADSLYVEEIDVGEEQTRTVVSGLVKYIPLDEMQNRKVCV 815

Query: 323  LCNLKPVNMRGVKSHAMVLAAFNYDHSKVELVDPPALAVVGERVTFPGFPGKPDTVIN 496
            LCNLKP  MRG+KS AMVLAA N DH+KVELV+PP+ A+VGER+TFPG+ G PD ++N
Sbjct: 816  LCNLKPATMRGIKSQAMVLAASNADHTKVELVEPPSSALVGERITFPGYEGNPDELLN 873


>emb|CBI17224.3| unnamed protein product [Vitis vinifera]
          Length = 949

 Score =  177 bits (448), Expect = 1e-42
 Identities = 86/118 (72%), Positives = 100/118 (84%)
 Frame = +2

Query: 143  IFISRLDFRVGIIKKVWEHPNADSLYVEEIDVGEESSRTTVSGLVNHVPMEQMQDRKVCV 322
            I ISRLD RVG+I KV +HP+ADSLYVEEIDVGE S+RT VSGLV  +P+E+MQ+RKVCV
Sbjct: 786  ISISRLDIRVGLITKVQKHPDADSLYVEEIDVGEGSTRTVVSGLVKFIPLEEMQNRKVCV 845

Query: 323  LCNLKPVNMRGVKSHAMVLAAFNYDHSKVELVDPPALAVVGERVTFPGFPGKPDTVIN 496
            LCNLKP  MRG+KS AMVLAA N +H+KVELV+PP  A VGERVTFPGF G+PD V+N
Sbjct: 846  LCNLKPATMRGIKSQAMVLAASNSEHTKVELVEPPQSAAVGERVTFPGFEGEPDDVLN 903


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