BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032652
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270866.1| PREDICTED: pentatricopeptide repeat-containi...   156   2e-36
emb|CAN77435.1| hypothetical protein VITISV_017817 [Vitis vinifera]   156   2e-36
ref|XP_002517040.1| pentatricopeptide repeat-containing protein,...   151   6e-35
dbj|BAF01120.1| hypothetical protein [Arabidopsis thaliana]           120   2e-25
ref|NP_175445.1| pentatricopeptide repeat-containing protein [Ar...   120   2e-25

>ref|XP_002270866.1| PREDICTED: pentatricopeptide repeat-containing protein At1g50270
           [Vitis vinifera] gi|296089231|emb|CBI39003.3| unnamed
           protein product [Vitis vinifera]
          Length = 601

 Score =  156 bits (394), Expect = 2e-36
 Identities = 71/104 (68%), Positives = 84/104 (80%)
 Frame = +2

Query: 2   WDVYLGSTLVDMYGKCDSCDDARKVFEEMPLRNVVTWTALIAGYVHCSRFKDALLVFQGL 181
           WDVY+GS LVDMY KC  CDDA KVF EMP RN+V+W ALIAGYV C+R+K+AL VFQ +
Sbjct: 238 WDVYVGSALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEM 297

Query: 182 LVERLIPNQVTVVSVLTACAQLGALDQGRWVHNYIRRRKLGCNS 313
           ++E + PNQ TV S LTACAQLG+LDQGRW+H Y+ R KLG NS
Sbjct: 298 IIEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNS 341



 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 36/84 (42%), Positives = 52/84 (61%)
 Frame = +2

Query: 14  LGSTLVDMYGKCDSCDDARKVFEEMPLRNVVTWTALIAGYVHCSRFKDALLVFQGLLVER 193
           LG+ LVDMY KC   D+A  VFE++P ++V  WTA+I G         +L +F  ++  R
Sbjct: 343 LGTALVDMYSKCGCVDEALLVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLFSQMIRSR 402

Query: 194 LIPNQVTVVSVLTACAQLGALDQG 265
           + PN VT + VL+ACA  G +D+G
Sbjct: 403 VQPNGVTFLGVLSACAHGGLVDEG 426



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 35/94 (37%), Positives = 55/94 (58%)
 Frame = +2

Query: 2   WDVYLGSTLVDMYGKCDSCDDARKVFEEMPLRNVVTWTALIAGYVHCSRFKDALLVFQGL 181
           +D ++ ++LV  +  C   D +R++F E   ++VV+WTALI G +   R  +AL  F  +
Sbjct: 136 FDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLRNGRAVEALECFVEM 195

Query: 182 LVERLIPNQVTVVSVLTACAQLGALDQGRWVHNY 283
               +  ++VTVVSVL A A L  +  GRWVH +
Sbjct: 196 RSSGVEVDEVTVVSVLCAAAMLRDVWFGRWVHGF 229


>emb|CAN77435.1| hypothetical protein VITISV_017817 [Vitis vinifera]
          Length = 601

 Score =  156 bits (394), Expect = 2e-36
 Identities = 71/104 (68%), Positives = 84/104 (80%)
 Frame = +2

Query: 2   WDVYLGSTLVDMYGKCDSCDDARKVFEEMPLRNVVTWTALIAGYVHCSRFKDALLVFQGL 181
           WDVY+GS LVDMY KC  CDDA KVF EMP RN+V+W ALIAGYV C+R+K+AL VFQ +
Sbjct: 238 WDVYVGSALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEM 297

Query: 182 LVERLIPNQVTVVSVLTACAQLGALDQGRWVHNYIRRRKLGCNS 313
           ++E + PNQ TV S LTACAQLG+LDQGRW+H Y+ R KLG NS
Sbjct: 298 IIEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNS 341



 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 36/84 (42%), Positives = 52/84 (61%)
 Frame = +2

Query: 14  LGSTLVDMYGKCDSCDDARKVFEEMPLRNVVTWTALIAGYVHCSRFKDALLVFQGLLVER 193
           LG+ LVDMY KC   D+A  VFE++P ++V  WTA+I G         +L +F  ++  R
Sbjct: 343 LGTALVDMYSKCGCVDEALLVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLFSQMIRSR 402

Query: 194 LIPNQVTVVSVLTACAQLGALDQG 265
           + PN VT + VL+ACA  G +D+G
Sbjct: 403 VQPNGVTFLGVLSACAHGGLVDEG 426



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 34/94 (36%), Positives = 55/94 (58%)
 Frame = +2

Query: 2   WDVYLGSTLVDMYGKCDSCDDARKVFEEMPLRNVVTWTALIAGYVHCSRFKDALLVFQGL 181
           +D ++ ++LV  +  C   D +R++F E   ++VV+WTALI G +   R  +AL  F  +
Sbjct: 136 FDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLRNGRAVEALECFVEM 195

Query: 182 LVERLIPNQVTVVSVLTACAQLGALDQGRWVHNY 283
               +  ++VT+VSVL A A L  +  GRWVH +
Sbjct: 196 RSSGVEVDEVTIVSVLCAAAMLRDVWFGRWVHGF 229


>ref|XP_002517040.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543675|gb|EEF45203.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 456

 Score =  151 bits (381), Expect = 6e-35
 Identities = 70/106 (66%), Positives = 87/106 (82%)
 Frame = +2

Query: 2   WDVYLGSTLVDMYGKCDSCDDARKVFEEMPLRNVVTWTALIAGYVHCSRFKDALLVFQGL 181
           WDVY+GS+L+DMY KC  CDDA K+F EMP++N+V W+ALIAGYV C+RFKDALL+FQ +
Sbjct: 230 WDVYIGSSLLDMYCKCGYCDDACKLFNEMPVKNIVCWSALIAGYVQCNRFKDALLLFQDM 289

Query: 182 LVERLIPNQVTVVSVLTACAQLGALDQGRWVHNYIRRRKLGCNSII 319
           L+  + PNQ T+ SVLTA AQLGALD+GRWVH+YI R  L  NSI+
Sbjct: 290 LLTDVRPNQCTLSSVLTASAQLGALDRGRWVHDYIDRNSLEMNSIL 335



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 33/92 (35%), Positives = 52/92 (56%)
 Frame = +2

Query: 14  LGSTLVDMYGKCDSCDDARKVFEEMPLRNVVTWTALIAGYVHCSRFKDALLVFQGLLVER 193
           LG+ L+DMY KC    +A  VF ++ ++NV TWTA+I G         +L +F  ++   
Sbjct: 335 LGTALIDMYAKCGCISEAYVVFNKLHIKNVYTWTAMINGLAMHGDALSSLNLFSHMISNG 394

Query: 194 LIPNQVTVVSVLTACAQLGALDQGRWVHNYIR 289
           + PN VT V +L ACA  G +  GR + + ++
Sbjct: 395 VQPNGVTFVGILNACAHGGLVHIGRGLFDMMK 426



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 33/94 (35%), Positives = 52/94 (55%)
 Frame = +2

Query: 2   WDVYLGSTLVDMYGKCDSCDDARKVFEEMPLRNVVTWTALIAGYVHCSRFKDALLVFQGL 181
           +D  + ++L+  +  C     A +V +E P RN+VTWTA+I GYV      D +  F+ +
Sbjct: 128 FDNSVTNSLITAFSNCGCVQFAHQVLDESPHRNLVTWTAMIDGYVRNGFPVDGIKCFKKM 187

Query: 182 LVERLIPNQVTVVSVLTACAQLGALDQGRWVHNY 283
               +  +++TVVSVL A    G +  GRWVH +
Sbjct: 188 RSMGVKIDEITVVSVLCAAGMAGDVWFGRWVHGF 221


>dbj|BAF01120.1| hypothetical protein [Arabidopsis thaliana]
          Length = 596

 Score =  120 bits (300), Expect = 2e-25
 Identities = 58/103 (56%), Positives = 76/103 (73%)
 Frame = +2

Query: 5   DVYLGSTLVDMYGKCDSCDDARKVFEEMPLRNVVTWTALIAGYVHCSRFKDALLVFQGLL 184
           DV++GS+LVDMYGKC   DDA+KVF+EMP RNVVTWTALIAGYV    F   +LVF+ +L
Sbjct: 239 DVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEML 298

Query: 185 VERLIPNQVTVVSVLTACAQLGALDQGRWVHNYIRRRKLGCNS 313
              + PN+ T+ SVL+ACA +GAL +GR VH Y+ +  +  N+
Sbjct: 299 KSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINT 341



 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 35/84 (41%), Positives = 55/84 (65%)
 Frame = +2

Query: 17  GSTLVDMYGKCDSCDDARKVFEEMPLRNVVTWTALIAGYVHCSRFKDALLVFQGLLVERL 196
           G+TL+D+Y KC   ++A  VFE +  +NV TWTA+I G+      +DA  +F  +L   +
Sbjct: 344 GTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHV 403

Query: 197 IPNQVTVVSVLTACAQLGALDQGR 268
            PN+VT ++VL+ACA  G +++GR
Sbjct: 404 SPNEVTFMAVLSACAHGGLVEEGR 427



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 32/106 (30%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
 Frame = +2

Query: 5   DVYLGSTLVDMYGKCDSCDDARKVFEEMPLRNVVTWTALIAGYVHCSRFKDALLVFQGLL 184
           D ++ ++L+  Y      D A ++F+    ++VVTWTA+I G+V      +A++ F  + 
Sbjct: 137 DPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMK 196

Query: 185 VERLIPNQVTVVSVLTACAQLGALDQGRWVHN-YIRRRKLGCNSII 319
              +  N++TVVSVL A  ++  +  GR VH  Y+   ++ C+  I
Sbjct: 197 KTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFI 242


>ref|NP_175445.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75213175|sp|Q9SX45.1|PPR75_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g50270 gi|5734776|gb|AAD50041.1|AC007980_6
           Hypothetical protein [Arabidopsis thaliana]
           gi|332194410|gb|AEE32531.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 596

 Score =  120 bits (300), Expect = 2e-25
 Identities = 58/103 (56%), Positives = 76/103 (73%)
 Frame = +2

Query: 5   DVYLGSTLVDMYGKCDSCDDARKVFEEMPLRNVVTWTALIAGYVHCSRFKDALLVFQGLL 184
           DV++GS+LVDMYGKC   DDA+KVF+EMP RNVVTWTALIAGYV    F   +LVF+ +L
Sbjct: 239 DVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEML 298

Query: 185 VERLIPNQVTVVSVLTACAQLGALDQGRWVHNYIRRRKLGCNS 313
              + PN+ T+ SVL+ACA +GAL +GR VH Y+ +  +  N+
Sbjct: 299 KSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINT 341



 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 35/84 (41%), Positives = 55/84 (65%)
 Frame = +2

Query: 17  GSTLVDMYGKCDSCDDARKVFEEMPLRNVVTWTALIAGYVHCSRFKDALLVFQGLLVERL 196
           G+TL+D+Y KC   ++A  VFE +  +NV TWTA+I G+      +DA  +F  +L   +
Sbjct: 344 GTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHV 403

Query: 197 IPNQVTVVSVLTACAQLGALDQGR 268
            PN+VT ++VL+ACA  G +++GR
Sbjct: 404 SPNEVTFMAVLSACAHGGLVEEGR 427



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 32/106 (30%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
 Frame = +2

Query: 5   DVYLGSTLVDMYGKCDSCDDARKVFEEMPLRNVVTWTALIAGYVHCSRFKDALLVFQGLL 184
           D ++ ++L+  Y      D A ++F+    ++VVTWTA+I G+V      +A++ F  + 
Sbjct: 137 DPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMK 196

Query: 185 VERLIPNQVTVVSVLTACAQLGALDQGRWVHN-YIRRRKLGCNSII 319
              +  N++TVVSVL A  ++  +  GR VH  Y+   ++ C+  I
Sbjct: 197 KTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFI 242