BLASTX nr result

ID: Dioscorea21_contig00032646 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032646
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317317.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_003629873.1| Cyclic phosphodiesterase [Medicago truncatul...    59   3e-07
ref|XP_002263343.1| PREDICTED: cyclic phosphodiesterase [Vitis v...    59   4e-07
ref|XP_002522285.1| Cyclic phosphodiesterase, putative [Ricinus ...    59   5e-07
gb|ACN29271.1| unknown [Zea mays] gi|413946089|gb|AFW78738.1| cy...    55   6e-06

>ref|XP_002317317.1| predicted protein [Populus trichocarpa] gi|222860382|gb|EEE97929.1|
           predicted protein [Populus trichocarpa]
          Length = 190

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 36/86 (41%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
 Frame = -3

Query: 246 KTLMTTLRSEFGGAEFEPHVTVVRALRLRPADGLRHLHSAASSLDYY----XXXXXXXXX 79
           K LM  L SEFGG +FEPH+TVV A+ L   D L   HSA   L  Y             
Sbjct: 32  KRLMAGLASEFGGPQFEPHITVVGAIGLTEQDALEKFHSACDGLQAYTATVDRVATGTFF 91

Query: 78  XXXXXXXLDPTAEVVNAGYHCRAHFG 1
                  L P  EVV A  HC  HFG
Sbjct: 92  YQCVYLLLHPLPEVVEASAHCSGHFG 117


>ref|XP_003629873.1| Cyclic phosphodiesterase [Medicago truncatula]
           gi|355523895|gb|AET04349.1| Cyclic phosphodiesterase
           [Medicago truncatula] gi|388520963|gb|AFK48543.1|
           unknown [Medicago truncatula]
          Length = 184

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
 Frame = -3

Query: 240 LMTTLRSEFGGAEFEPHVTVVRALRLRPADGLRHLHSAASSLDYY----XXXXXXXXXXX 73
           LMT+LRS+FGG +FEPH+TVV A+ L P D L+ L SA+  +  +               
Sbjct: 28  LMTSLRSDFGGPQFEPHMTVVGAIELTPDDALKKLRSASEGVKSFQVTVDRVSAGTFFYQ 87

Query: 72  XXXXXLDPTAEVVNAGYHCRAHFG 1
                L PT +++    HC  HFG
Sbjct: 88  CVYLLLHPTPQILETNAHCCTHFG 111


>ref|XP_002263343.1| PREDICTED: cyclic phosphodiesterase [Vitis vinifera]
           gi|297740575|emb|CBI30757.3| unnamed protein product
           [Vitis vinifera]
          Length = 185

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 37/86 (43%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
 Frame = -3

Query: 246 KTLMTTLRSEFGGAEFEPHVTVVRALRLRPADGLRHLHSAASSLDYY----XXXXXXXXX 79
           K +M  LRSEFGG  FEPHVTVV A+ L  AD L    SA   L  Y             
Sbjct: 27  KKVMEGLRSEFGGPAFEPHVTVVGAISLTEADALHKFRSACDGLKAYDASVDSVATGTFF 86

Query: 78  XXXXXXXLDPTAEVVNAGYHCRAHFG 1
                  L P  EVV A  HC  HFG
Sbjct: 87  YQCVYLLLHPMPEVVEASAHCTGHFG 112


>ref|XP_002522285.1| Cyclic phosphodiesterase, putative [Ricinus communis]
           gi|223538538|gb|EEF40143.1| Cyclic phosphodiesterase,
           putative [Ricinus communis]
          Length = 190

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 35/86 (40%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
 Frame = -3

Query: 246 KTLMTTLRSEFGGAEFEPHVTVVRALRLRPADGLRHLHSAASSLDYY----XXXXXXXXX 79
           K LM  LRSEFGG +FEPHVTVV A+ L   + L    S+   L  Y             
Sbjct: 32  KKLMEDLRSEFGGPQFEPHVTVVGAISLTEEEALEKFRSSCDGLTRYIATVDRVATGTFF 91

Query: 78  XXXXXXXLDPTAEVVNAGYHCRAHFG 1
                  L+P+ EVV A  HC  HFG
Sbjct: 92  YQCIYLLLNPSPEVVRASAHCTGHFG 117


>gb|ACN29271.1| unknown [Zea mays] gi|413946089|gb|AFW78738.1| cyclic
           phosphodiesterase [Zea mays]
          Length = 184

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 34/86 (39%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
 Frame = -3

Query: 246 KTLMTTLRSEFGGAEFEPHVTVVRALRLRPADGLRHLHSAASSLDYY----XXXXXXXXX 79
           + +M  LR+ +GG  FEPHVTVV   R R ++ ++ L +AA+S+  Y             
Sbjct: 27  RRIMEGLRAAYGGPAFEPHVTVVGDFRGRRSEAVKVLRAAAASVQPYTARVTGVARGSFF 86

Query: 78  XXXXXXXLDPTAEVVNAGYHCRAHFG 1
                  LDPTAEVV A  HC A+FG
Sbjct: 87  YQCVYILLDPTAEVVGASDHCCANFG 112


Top