BLASTX nr result

ID: Dioscorea21_contig00032643 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032643
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]              125   3e-27
gb|AAM15062.1| putative retroelement integrase [Arabidopsis thal...   124   8e-27
emb|CAN62680.1| hypothetical protein VITISV_026754 [Vitis vinifera]   124   1e-26
gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum ...   122   2e-26
gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum ...   122   2e-26

>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
          Length = 1887

 Score =  125 bits (315), Expect = 3e-27
 Identities = 56/95 (58%), Positives = 76/95 (80%)
 Frame = +3

Query: 3    DDILIYSQDKEQHLDHLYKIFNTLWEQRLYANLKKCEFFSNSLVFLGYVVSRDGLKMDLS 182
            DDIL+YS+  E+H++HL  +   L +++LYANLKKC F +++LVFLG+VVS DG+K+D  
Sbjct: 1064 DDILVYSKSLEEHVEHLKMVLEVLRKEKLYANLKKCTFGTDNLVFLGFVVSTDGVKVDEE 1123

Query: 183  KLEAILSWPQPKSVHDIRSFHGLASFYRRFIKGFS 287
            K++AI  WP PKSV ++RSFHGLA FYRRF+K FS
Sbjct: 1124 KVKAIREWPSPKSVGEVRSFHGLAGFYRRFVKDFS 1158


>gb|AAM15062.1| putative retroelement integrase [Arabidopsis thaliana]
          Length = 1215

 Score =  124 bits (311), Expect = 8e-27
 Identities = 55/95 (57%), Positives = 74/95 (77%)
 Frame = +3

Query: 3   DDILIYSQDKEQHLDHLYKIFNTLWEQRLYANLKKCEFFSNSLVFLGYVVSRDGLKMDLS 182
           DDIL+YS+   +H++HL  + N L ++ LYANLKKC F +++LVFLG+VVS DG+K+D  
Sbjct: 573 DDILVYSESLREHIEHLDSVLNVLRKEELYANLKKCTFCTDNLVFLGFVVSADGVKVDEE 632

Query: 183 KLEAILSWPQPKSVHDIRSFHGLASFYRRFIKGFS 287
           K++AI  WP PK+V ++RSFHGLA FYRRF K FS
Sbjct: 633 KVKAIRDWPSPKTVGEVRSFHGLAGFYRRFFKDFS 667


>emb|CAN62680.1| hypothetical protein VITISV_026754 [Vitis vinifera]
          Length = 333

 Score =  124 bits (310), Expect = 1e-26
 Identities = 57/95 (60%), Positives = 74/95 (77%)
 Frame = +3

Query: 3   DDILIYSQDKEQHLDHLYKIFNTLWEQRLYANLKKCEFFSNSLVFLGYVVSRDGLKMDLS 182
           DDILIYS  KE HL H  ++   L  ++++AN+KKC+FF NSL+FLGY+VS +G+K+D S
Sbjct: 113 DDILIYSPSKESHLQHRKEVLEILKREKVHANMKKCKFFINSLLFLGYIVSAEGIKVDDS 172

Query: 183 KLEAILSWPQPKSVHDIRSFHGLASFYRRFIKGFS 287
           K+EAI SWP PK+V ++RSFHGL SF R FIK FS
Sbjct: 173 KVEAIRSWPIPKTVGEVRSFHGLTSFCRHFIKNFS 207


>gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score =  122 bits (307), Expect = 2e-26
 Identities = 56/95 (58%), Positives = 76/95 (80%)
 Frame = +3

Query: 3    DDILIYSQDKEQHLDHLYKIFNTLWEQRLYANLKKCEFFSNSLVFLGYVVSRDGLKMDLS 182
            DDILI+SQ+ ++HL+HL K+F  L  QRL+ANLKKC F  + +VFLG+VVS  G+++D  
Sbjct: 855  DDILIFSQNLDEHLEHLKKVFEVLRNQRLFANLKKCTFCVDRVVFLGFVVSSMGVEVDDE 914

Query: 183  KLEAILSWPQPKSVHDIRSFHGLASFYRRFIKGFS 287
            K++AI  WP+P SV ++RSFHGLASFYRRF++ FS
Sbjct: 915  KIKAIKEWPKPNSVTEVRSFHGLASFYRRFVRDFS 949


>gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score =  122 bits (307), Expect = 2e-26
 Identities = 56/95 (58%), Positives = 76/95 (80%)
 Frame = +3

Query: 3    DDILIYSQDKEQHLDHLYKIFNTLWEQRLYANLKKCEFFSNSLVFLGYVVSRDGLKMDLS 182
            DDILI+SQ+ ++HL+HL K+F  L  QRL+ANLKKC F  + +VFLG+VVS  G+++D  
Sbjct: 855  DDILIFSQNLDEHLEHLKKVFEVLRNQRLFANLKKCTFCVDRVVFLGFVVSSMGVEVDDE 914

Query: 183  KLEAILSWPQPKSVHDIRSFHGLASFYRRFIKGFS 287
            K++AI  WP+P SV ++RSFHGLASFYRRF++ FS
Sbjct: 915  KIKAIKEWPKPNSVTEVRSFHGLASFYRRFVRDFS 949


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