BLASTX nr result

ID: Dioscorea21_contig00032642 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032642
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283393.2| PREDICTED: ATP-dependent zinc metalloproteas...   103   1e-20
emb|CAN80116.1| hypothetical protein VITISV_032528 [Vitis vinifera]   103   1e-20
ref|XP_003551734.1| PREDICTED: pentatricopeptide repeat-containi...   100   9e-20
ref|XP_002437570.1| hypothetical protein SORBIDRAFT_10g029530 [S...    97   1e-18
ref|XP_003614030.1| Pentatricopeptide repeat-containing protein ...    96   2e-18

>ref|XP_002283393.2| PREDICTED: ATP-dependent zinc metalloprotease FTSH 6,
            chloroplastic-like [Vitis vinifera]
          Length = 1146

 Score =  103 bits (257), Expect = 1e-20
 Identities = 45/76 (59%), Positives = 60/76 (78%)
 Frame = -1

Query: 399  GNYVIAANMYSEAGSWEEAATMRRTMREEGLKKIVAESCIDVGGSLHRFVSGDESCADCE 220
            GN+V+ ANMY+E G W++AA +RRTM++ GLKK+  ESCI+VGGS+HRF SGD+   DCE
Sbjct: 1068 GNFVMVANMYAEVGKWDKAANVRRTMKDTGLKKMAGESCIEVGGSIHRFFSGDDPQLDCE 1127

Query: 219  KIYQLLDVLNLSMRMI 172
             + QLLD LNL M+ +
Sbjct: 1128 DVLQLLDGLNLHMKTV 1143


>emb|CAN80116.1| hypothetical protein VITISV_032528 [Vitis vinifera]
          Length = 505

 Score =  103 bits (257), Expect = 1e-20
 Identities = 45/76 (59%), Positives = 60/76 (78%)
 Frame = -1

Query: 399 GNYVIAANMYSEAGSWEEAATMRRTMREEGLKKIVAESCIDVGGSLHRFVSGDESCADCE 220
           GN+V+ ANMY+E G W++AA +RRTM++ GLKK+  ESCI+VGGS+HRF SGD+   DCE
Sbjct: 427 GNFVMVANMYAEVGKWDKAANVRRTMKDTGLKKMAGESCIEVGGSIHRFFSGDDPQLDCE 486

Query: 219 KIYQLLDVLNLSMRMI 172
            + QLLD LNL M+ +
Sbjct: 487 DVLQLLDGLNLHMKTV 502


>ref|XP_003551734.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g36730-like [Glycine max]
          Length = 505

 Score =  100 bits (250), Expect = 9e-20
 Identities = 46/92 (50%), Positives = 60/92 (65%)
 Frame = -1

Query: 447 GEMVXXXXXXXXXXXSGNYVIAANMYSEAGSWEEAATMRRTMREEGLKKIVAESCIDVGG 268
           GE V            GN VI ANMY+E G WEEAA +RR MR+ G+KK+  ESC+D+GG
Sbjct: 413 GERVSKKLLLKEPRRGGNLVIVANMYAEVGMWEEAANVRRVMRDGGMKKVAGESCVDLGG 472

Query: 267 SLHRFVSGDESCADCEKIYQLLDVLNLSMRMI 172
           S+HRF +G + C D   +Y LLD LNL ++M+
Sbjct: 473 SMHRFFAGYDPCPDLVPVYHLLDGLNLHLKMV 504


>ref|XP_002437570.1| hypothetical protein SORBIDRAFT_10g029530 [Sorghum bicolor]
           gi|241915793|gb|EER88937.1| hypothetical protein
           SORBIDRAFT_10g029530 [Sorghum bicolor]
          Length = 503

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 43/80 (53%), Positives = 60/80 (75%)
 Frame = -1

Query: 399 GNYVIAANMYSEAGSWEEAATMRRTMREEGLKKIVAESCIDVGGSLHRFVSGDESCADCE 220
           GN+V+ AN+YS+ G W++AA MRR MRE GLKK+  ESC++VGG + RF+SGDESC   +
Sbjct: 415 GNHVMVANIYSDIGLWDKAAMMRRVMREGGLKKMAGESCVEVGGRIQRFISGDESCPGLD 474

Query: 219 KIYQLLDVLNLSMRMICPED 160
            +Y++L  LN++MR   P D
Sbjct: 475 GVYRVLHELNINMRKWEPVD 494


>ref|XP_003614030.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355515365|gb|AES96988.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 498

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 42/76 (55%), Positives = 58/76 (76%)
 Frame = -1

Query: 399 GNYVIAANMYSEAGSWEEAATMRRTMREEGLKKIVAESCIDVGGSLHRFVSGDESCADCE 220
           GN VI ANMY+E G+WE+AA +RR MR+ GLKK+  ESC+D+GGS++RF +G +S  D  
Sbjct: 422 GNLVIVANMYAEVGNWEKAANVRRVMRDGGLKKMAGESCVDLGGSMYRFFAGHDSRPDLM 481

Query: 219 KIYQLLDVLNLSMRMI 172
            +Y LLD LNL ++M+
Sbjct: 482 PVYDLLDALNLHLKMV 497


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