BLASTX nr result

ID: Dioscorea21_contig00032611 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032611
         (1136 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA98491.1| retrotransposon protein, putative, unclassified [...    74   5e-11
gb|EEC81662.1| hypothetical protein OsI_25211 [Oryza sativa Indi...    74   7e-11
gb|EEE54600.1| hypothetical protein OsJ_01823 [Oryza sativa Japo...    73   1e-10
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo...    73   1e-10
ref|XP_003606192.1| 3-ketoacyl-CoA synthase [Medicago truncatula...    70   1e-09

>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score = 74.3 bits (181), Expect = 5e-11
 Identities = 57/228 (25%), Positives = 95/228 (41%), Gaps = 4/228 (1%)
 Frame = +2

Query: 53   DGWSILWKLNVAPRVKNFIWLLFHGKVQTYDVLYHMHIGPPNFCVFCGLVLETADHIFRD 232
            D W  LWKL V  ++K+F+W + H  +     L+H  +     CV CG   E A H+F  
Sbjct: 1300 DFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLHHRGMDVDTRCVMCGRYNEDAGHLFFK 1359

Query: 233  CPKSKIVWNWVECLSGFKLYLGDHIASGSWLDFNIYGNXXXXXXXXXXTIWYIWKSRCDI 412
            C   K VW  +  L   +  L +   SG  +  +IY             +W  WK R ++
Sbjct: 1360 CKPVKKVWQALN-LEELRSML-EQQTSGKNVLQSIYCRPENERTSAIVCLWQWWKERNEV 1417

Query: 413  I---FRQSSPNFYNMAKIAVGHFLEFKHRRLNSKLINFFIQNPPQPGTVCIFSAAVWNAS 583
                  +S     ++     G F+    +  + +     +   P    V I +   ++++
Sbjct: 1418 REGGIPRSPAELSHLIMSQAGEFVRMNVKEKSPRTGECAVWRRPPLNFVKINTDGAYSSN 1477

Query: 584  SGKGGFGFIILESNAQVLCAG-NCSANLGEGIALESKALITGLKTISD 724
              +GG+GF+I +    VL AG   +A L +    E  A    +KT S+
Sbjct: 1478 MKQGGWGFVIKDQTGAVLQAGAGPAAYLQDAFHAEVVACAAAIKTASE 1525


>gb|EEC81662.1| hypothetical protein OsI_25211 [Oryza sativa Indica Group]
          Length = 561

 Score = 73.9 bits (180), Expect = 7e-11
 Identities = 59/231 (25%), Positives = 94/231 (40%), Gaps = 7/231 (3%)
 Frame = +2

Query: 53  DGWSILWKLNVAPRVKNFIWLLFHGKVQTYDVLYHMHIGPPNFCVFCGLVLETADHIFRD 232
           D W  LWKL V  ++K+F+W + H  +     L+H  +     CV CG   E A H+F  
Sbjct: 240 DFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLHHRGMDVDTRCVMCGRYNEDAGHLFFK 299

Query: 233 CPKSKIVW---NWVECLSGFKLYLGDHIASGSWLDFNIYGNXXXXXXXXXXTIWYIWKSR 403
           C   K VW   N  E  S  K        SG  +  +IY             +W  WK R
Sbjct: 300 CKPVKKVWQALNLEELRSMLK-----QQTSGKNVLQSIYCRPENERTSAIVCLWQWWKER 354

Query: 404 CDII---FRQSSPNFYNMAKIAVGHFLEFKHRRLNSKLINFFIQNPPQPGTVCIFSAAVW 574
            ++      +S     ++     G F+    +  + +     +   P    V I +   +
Sbjct: 355 NEVREGGIPRSPAELSHLIMSQAGEFVRMNVKEKSPRTGECAVWRRPPLNFVKINTDGAY 414

Query: 575 NASSGKGGFGFIILESNAQVLCAG-NCSANLGEGIALESKALITGLKTISD 724
           +++  +GG+GF+I +    VL AG   +A L +    E  A    +KT S+
Sbjct: 415 SSNMKQGGWGFVIKDQTGAVLQAGAGPAAYLQDAFHAEVVACAAAIKTASE 465


>gb|EEE54600.1| hypothetical protein OsJ_01823 [Oryza sativa Japonica Group]
          Length = 639

 Score = 73.2 bits (178), Expect = 1e-10
 Identities = 57/228 (25%), Positives = 94/228 (41%), Gaps = 4/228 (1%)
 Frame = +2

Query: 53  DGWSILWKLNVAPRVKNFIWLLFHGKVQTYDVLYHMHIGPPNFCVFCGLVLETADHIFRD 232
           D W  LWKL V  ++K+F+W + H  +     L H  +     CV CG   E A H+F  
Sbjct: 240 DFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLQHRGMDVDTRCVMCGRYNEDAGHLFFK 299

Query: 233 CPKSKIVWNWVECLSGFKLYLGDHIASGSWLDFNIYGNXXXXXXXXXXTIWYIWKSRCDI 412
           C   K VW  +  L   +  L +   SG  +  +IY             +W  WK R ++
Sbjct: 300 CKPVKKVWQALN-LEELRSML-EQQTSGKNVLQSIYCRPEIERTSAIVCLWQWWKERNEV 357

Query: 413 I---FRQSSPNFYNMAKIAVGHFLEFKHRRLNSKLINFFIQNPPQPGTVCIFSAAVWNAS 583
                 +S     ++     G F+    +  + +     +   P    V I +   ++++
Sbjct: 358 REGGIPRSPAELSHLIMSQAGEFVRMNVKEKSPRTGECAVWRRPPLNFVKINTDGAYSSN 417

Query: 584 SGKGGFGFIILESNAQVLCAG-NCSANLGEGIALESKALITGLKTISD 724
             +GG+GF+I +    VL AG   +A L +    E  A    +KT S+
Sbjct: 418 MKQGGWGFVIRDQTGAVLQAGAGPAAYLQDAFHAEVVACAAAIKTASE 465


>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
          Length = 1594

 Score = 73.2 bits (178), Expect = 1e-10
 Identities = 57/228 (25%), Positives = 94/228 (41%), Gaps = 4/228 (1%)
 Frame = +2

Query: 53   DGWSILWKLNVAPRVKNFIWLLFHGKVQTYDVLYHMHIGPPNFCVFCGLVLETADHIFRD 232
            D W  LWKL V  ++K+F+W + H  +     L H  +     CV CG   E A H+F  
Sbjct: 1273 DFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLQHRGMDVDTRCVMCGRYNEDAGHLFFK 1332

Query: 233  CPKSKIVWNWVECLSGFKLYLGDHIASGSWLDFNIYGNXXXXXXXXXXTIWYIWKSRCDI 412
            C   K VW  +  L   +  L +   SG  +  +IY             +W  WK R ++
Sbjct: 1333 CKPVKKVWQALN-LEELRSML-EQQTSGKNVLQSIYCRPEIERTSAIVCLWQWWKERNEV 1390

Query: 413  I---FRQSSPNFYNMAKIAVGHFLEFKHRRLNSKLINFFIQNPPQPGTVCIFSAAVWNAS 583
                  +S     ++     G F+    +  + +     +   P    V I +   ++++
Sbjct: 1391 REGGIPRSPAELSHLIMSQAGEFVRMNVKEKSPRTGECAVWRRPPLNFVKINTDGAYSSN 1450

Query: 584  SGKGGFGFIILESNAQVLCAG-NCSANLGEGIALESKALITGLKTISD 724
              +GG+GF+I +    VL AG   +A L +    E  A    +KT S+
Sbjct: 1451 MKQGGWGFVIRDQTGAVLQAGAGPAAYLQDAFHAEVVACAAAIKTASE 1498


>ref|XP_003606192.1| 3-ketoacyl-CoA synthase [Medicago truncatula]
           gi|355507247|gb|AES88389.1| 3-ketoacyl-CoA synthase
           [Medicago truncatula]
          Length = 468

 Score = 70.1 bits (170), Expect = 1e-09
 Identities = 39/121 (32%), Positives = 63/121 (52%), Gaps = 4/121 (3%)
 Frame = +2

Query: 53  DGWSILWKLNVAPRVKNFIWLLFHGKVQTYDVLYHMHIGPPNFCVFCGLVLETADHIFRD 232
           D W  +WKL+V  RV++F+WL+ H ++ T   L  MHIG P +   CG  +ET  H+ RD
Sbjct: 65  DRWDQVWKLHVPERVRSFVWLIKHDRLMTCSRLNRMHIGNP-YYHHCGDAIETTLHVLRD 123

Query: 233 CPKSKIVWNWVECLSGFKLYLGDHIAS---GSWLDFNI-YGNXXXXXXXXXXTIWYIWKS 400
           CP ++ VW     L+ F+L    +  +     W++ N+              T+WY W++
Sbjct: 124 CPLAEAVW-----LNSFELQFRTNFYTTDLRDWIEQNLNRKRWAEFWPTTCHTLWY-WRN 177

Query: 401 R 403
           +
Sbjct: 178 K 178


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