BLASTX nr result

ID: Dioscorea21_contig00032607 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032607
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containi...   169   2e-40
emb|CBI40590.3| unnamed protein product [Vitis vinifera]              169   2e-40
ref|XP_003627527.1| Pentatricopeptide repeat-containing protein ...   167   1e-39
ref|XP_002436382.1| hypothetical protein SORBIDRAFT_10g001540 [S...   165   3e-39
gb|AFW86094.1| hypothetical protein ZEAMMB73_140838 [Zea mays]        163   2e-38

>ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08510-like [Vitis vinifera]
          Length = 512

 Score =  169 bits (428), Expect = 2e-40
 Identities = 79/114 (69%), Positives = 98/114 (85%)
 Frame = -2

Query: 351 TSMVAGFCQNGRYEDALQVFVRMCEDCEVRPNEVTLASVLPACANLGSLELGKRIERYAR 172
           T+M++G+ QNG+Y  AL +F+ M E+ E+RPNEVTLASVLPACANLG+LE+G+RIE YAR
Sbjct: 183 TAMISGYAQNGQYAKALSMFLMMEEETEMRPNEVTLASVLPACANLGALEVGERIEVYAR 242

Query: 171 ENGFVRNLFVANALVEMFAKCGDIRNAWRVFEEIGDRRNLCSWNSMIMGLAVHG 10
            NG+ +NL+V+NAL+EM+A+CG I  AW VFEEI  RRNLCSWNSMIMGLAVHG
Sbjct: 243 GNGYFKNLYVSNALLEMYARCGRIDKAWGVFEEIDGRRNLCSWNSMIMGLAVHG 296



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 34/110 (30%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
 Frame = -2

Query: 345 MVAGFCQNGRYEDALQVFVRMC-EDCEVRPNEVTLASVLPACANLGSLELGKRIERYARE 169
           ++  +  +G +     ++ +MC + C   PNE +   +  ACA+L S + G+ +  +  +
Sbjct: 53  LIQAYSSHGPHHQCFSLYTQMCLQGCS--PNEHSFTFLFSACASLSSHQQGRMLHTHFVK 110

Query: 168 NGFVRNLFVANALVEMFAKCGDIRNAWRVFEEIGDRRNLCSWNSMIMGLA 19
           +GF  ++F   ALV+M+AK G +  A + F+E+   R++ +WNSMI G A
Sbjct: 111 SGFGCDVFALTALVDMYAKLGLLSLARKQFDEM-TVRDVPTWNSMIAGYA 159


>emb|CBI40590.3| unnamed protein product [Vitis vinifera]
          Length = 495

 Score =  169 bits (428), Expect = 2e-40
 Identities = 79/114 (69%), Positives = 98/114 (85%)
 Frame = -2

Query: 351 TSMVAGFCQNGRYEDALQVFVRMCEDCEVRPNEVTLASVLPACANLGSLELGKRIERYAR 172
           T+M++G+ QNG+Y  AL +F+ M E+ E+RPNEVTLASVLPACANLG+LE+G+RIE YAR
Sbjct: 183 TAMISGYAQNGQYAKALSMFLMMEEETEMRPNEVTLASVLPACANLGALEVGERIEVYAR 242

Query: 171 ENGFVRNLFVANALVEMFAKCGDIRNAWRVFEEIGDRRNLCSWNSMIMGLAVHG 10
            NG+ +NL+V+NAL+EM+A+CG I  AW VFEEI  RRNLCSWNSMIMGLAVHG
Sbjct: 243 GNGYFKNLYVSNALLEMYARCGRIDKAWGVFEEIDGRRNLCSWNSMIMGLAVHG 296



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 34/110 (30%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
 Frame = -2

Query: 345 MVAGFCQNGRYEDALQVFVRMC-EDCEVRPNEVTLASVLPACANLGSLELGKRIERYARE 169
           ++  +  +G +     ++ +MC + C   PNE +   +  ACA+L S + G+ +  +  +
Sbjct: 53  LIQAYSSHGPHHQCFSLYTQMCLQGCS--PNEHSFTFLFSACASLSSHQQGRMLHTHFVK 110

Query: 168 NGFVRNLFVANALVEMFAKCGDIRNAWRVFEEIGDRRNLCSWNSMIMGLA 19
           +GF  ++F   ALV+M+AK G +  A + F+E+   R++ +WNSMI G A
Sbjct: 111 SGFGCDVFALTALVDMYAKLGLLSLARKQFDEM-TVRDVPTWNSMIAGYA 159


>ref|XP_003627527.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355521549|gb|AET02003.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  167 bits (422), Expect = 1e-39
 Identities = 79/114 (69%), Positives = 98/114 (85%)
 Frame = -2

Query: 351 TSMVAGFCQNGRYEDALQVFVRMCEDCEVRPNEVTLASVLPACANLGSLELGKRIERYAR 172
           T+MV+G+ QN +YE AL +F+RM  + +V PNEVTLASVLPACANLG+LE+G+R+E YAR
Sbjct: 180 TTMVSGYLQNKQYEKALGLFMRMEREKDVSPNEVTLASVLPACANLGALEIGQRVEVYAR 239

Query: 171 ENGFVRNLFVANALVEMFAKCGDIRNAWRVFEEIGDRRNLCSWNSMIMGLAVHG 10
           +NGF +NLFV NA++EM+AKCG I  AW+VF+EIG  RNLCSWNSMIMGLAVHG
Sbjct: 240 KNGFFKNLFVCNAVLEMYAKCGKIDVAWKVFDEIGRFRNLCSWNSMIMGLAVHG 293



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/84 (34%), Positives = 49/84 (58%)
 Frame = -2

Query: 261 PNEVTLASVLPACANLGSLELGKRIERYARENGFVRNLFVANALVEMFAKCGDIRNAWRV 82
           PN+ T   +   C +L SL LG+ I     ++GF  ++F + AL++M+AK G ++ A  V
Sbjct: 77  PNQYTFNFLFTTCTSLSSLSLGQMIHTQFMKSGFKHDVFASTALLDMYAKLGCLKFARNV 136

Query: 81  FEEIGDRRNLCSWNSMIMGLAVHG 10
           F+E+   + L +WN+M+ G    G
Sbjct: 137 FDEM-SVKELATWNAMMAGCTRFG 159


>ref|XP_002436382.1| hypothetical protein SORBIDRAFT_10g001540 [Sorghum bicolor]
           gi|241914605|gb|EER87749.1| hypothetical protein
           SORBIDRAFT_10g001540 [Sorghum bicolor]
          Length = 507

 Score =  165 bits (418), Expect = 3e-39
 Identities = 74/117 (63%), Positives = 96/117 (82%)
 Frame = -2

Query: 351 TSMVAGFCQNGRYEDALQVFVRMCEDCEVRPNEVTLASVLPACANLGSLELGKRIERYAR 172
           T+MV+G+ QNGR+E+A++ F+ M E C VRPNEVT++SVLPACA +G+L LG+++ERYAR
Sbjct: 186 TAMVSGYAQNGRHEEAVRTFLEMWEGCGVRPNEVTVSSVLPACAAVGALALGRKVERYAR 245

Query: 171 ENGFVRNLFVANALVEMFAKCGDIRNAWRVFEEIGDRRNLCSWNSMIMGLAVHGSWK 1
             G + N++VANALVEM+AKCG IR AW VF  IG +R+LCSWNSMIM  AVHG W+
Sbjct: 246 GRGMLTNVYVANALVEMYAKCGSIRRAWMVFRGIGKQRDLCSWNSMIMAFAVHGLWR 302


>gb|AFW86094.1| hypothetical protein ZEAMMB73_140838 [Zea mays]
          Length = 508

 Score =  163 bits (412), Expect = 2e-38
 Identities = 73/116 (62%), Positives = 96/116 (82%)
 Frame = -2

Query: 351 TSMVAGFCQNGRYEDALQVFVRMCEDCEVRPNEVTLASVLPACANLGSLELGKRIERYAR 172
           T+MV+G+ QNGR+E+A++ F+ M +   VRPNE+T++SVLPACA LG+L LG+++ERYAR
Sbjct: 187 TAMVSGYAQNGRHEEAVRTFLDMWDGAGVRPNELTVSSVLPACAALGALALGRKVERYAR 246

Query: 171 ENGFVRNLFVANALVEMFAKCGDIRNAWRVFEEIGDRRNLCSWNSMIMGLAVHGSW 4
             G +RN++VANALVEM+AKCG IR AW+VF  +G RR+LCSWNSMIM  AVHG W
Sbjct: 247 GRGMLRNVYVANALVEMYAKCGSIRRAWKVFRGMGTRRDLCSWNSMIMAFAVHGLW 302


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