BLASTX nr result

ID: Dioscorea21_contig00032554 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032554
         (231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304822.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11
ref|XP_002275846.1| PREDICTED: transcription factor GAMYB [Vitis...    69   4e-10
emb|CAN78897.1| hypothetical protein VITISV_025421 [Vitis vinifera]    69   4e-10
dbj|BAJ61445.1| R2R3-MYB transcription factor [Lupinus albus]          67   1e-09
ref|XP_002525574.1| r2r3-myb transcription factor, putative [Ric...    64   1e-08

>ref|XP_002304822.1| predicted protein [Populus trichocarpa] gi|222842254|gb|EEE79801.1|
           predicted protein [Populus trichocarpa]
          Length = 558

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 39/80 (48%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
 Frame = +2

Query: 2   WNTRIKRRQRAGLPLHPPPLCFQASNYSQNNHTENEFSSHNKEKNE----KPIDIPAFMF 169
           WNTRIKRRQRAGLPL+PP +  Q    SQ     N   S NK +++        IP  MF
Sbjct: 133 WNTRIKRRQRAGLPLYPPEVSLQTLQGSQQCLDINGMDSGNKGQHDILQTHNYGIPDVMF 192

Query: 170 DNLKGNRGYVPYTPPFPENS 229
           DNLK NR  +PY P  P+ S
Sbjct: 193 DNLKTNRSILPYVPELPDIS 212


>ref|XP_002275846.1| PREDICTED: transcription factor GAMYB [Vitis vinifera]
           gi|298205121|emb|CBI40642.3| unnamed protein product
           [Vitis vinifera]
          Length = 559

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 35/80 (43%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
 Frame = +2

Query: 2   WNTRIKRRQRAGLPLHPPPLCFQASNYSQNNHTENEFSSHNKEKNE----KPIDIPAFMF 169
           WNTRIKRRQRAGLPL+PP +CFQA   SQ        +  +K  ++       +IP  + 
Sbjct: 134 WNTRIKRRQRAGLPLYPPEVCFQALQESQQIQNTGGINGGDKVHHDLLQTNSYEIPDVIL 193

Query: 170 DNLKGNRGYVPYTPPFPENS 229
           D  K N+   PY P FP  S
Sbjct: 194 DGFKANQDAFPYVPDFPNLS 213


>emb|CAN78897.1| hypothetical protein VITISV_025421 [Vitis vinifera]
          Length = 455

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 35/80 (43%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
 Frame = +2

Query: 2   WNTRIKRRQRAGLPLHPPPLCFQASNYSQNNHTENEFSSHNKEKNE----KPIDIPAFMF 169
           WNTRIKRRQRAGLPL+PP +CFQA   SQ        +  +K  ++       +IP  + 
Sbjct: 30  WNTRIKRRQRAGLPLYPPEVCFQALQESQQIQNTGGINGGDKVHHDLLQTNSYEIPDVIL 89

Query: 170 DNLKGNRGYVPYTPPFPENS 229
           D  K N+   PY P FP  S
Sbjct: 90  DGFKANQDAFPYVPDFPNLS 109


>dbj|BAJ61445.1| R2R3-MYB transcription factor [Lupinus albus]
          Length = 466

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
 Frame = +2

Query: 2   WNTRIKRRQRAGLPLHPPPLCFQASNYSQNNHTENEFSSHNKEKNE--KPIDIPAFMFDN 175
           WNTRIKRRQRAGLPL+PP +C QA   S  + +    +S NK +++     +I   + D+
Sbjct: 51  WNTRIKRRQRAGLPLYPPEVCSQAFQESHQSQSTGGVNSGNKVRHDLLNSYEIHDAIIDS 110

Query: 176 LKGNRGYVPYTPPFPENS 229
           +K N+G  PY P  P+ S
Sbjct: 111 MKDNQGISPYVPEPPDIS 128


>ref|XP_002525574.1| r2r3-myb transcription factor, putative [Ricinus communis]
           gi|223535153|gb|EEF36833.1| r2r3-myb transcription
           factor, putative [Ricinus communis]
          Length = 556

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 33/74 (44%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
 Frame = +2

Query: 2   WNTRIKRRQRAGLPLHPPPLCFQASNYSQNNHTENEFSSHNKEKNE----KPIDIPAFMF 169
           WNTRIKRRQRAGLPL+PP + FQA   S    T    ++ +K   +       +IP  +F
Sbjct: 134 WNTRIKRRQRAGLPLYPPEVSFQALQESHQGLTIGGINTGDKVHGDLLRNNGYEIPDVIF 193

Query: 170 DNLKGNRGYVPYTP 211
           D+LK ++G  PY P
Sbjct: 194 DSLKASQGISPYVP 207


Top