BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032402
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003610927.1| Pentatricopeptide repeat-containing protein ...    66   3e-09
ref|NP_195434.1| pentatricopeptide repeat-containing protein [Ar...    62   4e-08
ref|XP_002869013.1| pentatricopeptide repeat-containing protein ...    62   5e-08
ref|XP_002324099.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08
ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containi...    60   1e-07

>ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355512262|gb|AES93885.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 802

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 38/102 (37%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
 Frame = -3

Query: 301 ISKLCKQERLDEAINVLHLFXXXXXXXXXXXXXXXXXXLTLRAPHQARRILAIARISG-- 128
           I   C+Q RL EA++ LH                      L      +R+ A  + S   
Sbjct: 39  IELFCQQNRLKEAVDYLHRIPQPSPRLYSTLIAACLRHRKLEL---GKRVHAHTKASNFI 95

Query: 127 ADLVVSNRLIHLYAKCGRVGDARKVFDEMPQRDPFSWNTIIA 2
             +V+SNRLIH+YAKCG + DA+ +FDE+PQ+D  SWNT+I+
Sbjct: 96  PGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMIS 137


>ref|NP_195434.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75097747|sp|O23169.1|PP353_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g37170 gi|2464864|emb|CAB16758.1| putative protein
           [Arabidopsis thaliana] gi|7270666|emb|CAB80383.1|
           putative protein [Arabidopsis thaliana]
           gi|332661361|gb|AEE86761.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 691

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 38/111 (34%), Positives = 53/111 (47%), Gaps = 12/111 (10%)
 Frame = -3

Query: 301 ISKLCKQERLDEAINVL----------HLFXXXXXXXXXXXXXXXXXXLTLRAPHQARRI 152
           + +LC+  R  EAI+VL           L                      RA  + +++
Sbjct: 48  VERLCRANRFGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKV 107

Query: 151 LAIARISG--ADLVVSNRLIHLYAKCGRVGDARKVFDEMPQRDPFSWNTII 5
               R SG    +V+ NRL+ +YAKCG + DARKVFDEMP RD  SWN ++
Sbjct: 108 HEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMV 158


>ref|XP_002869013.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297314849|gb|EFH45272.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 693

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 12/111 (10%)
 Frame = -3

Query: 301 ISKLCKQERLDEAINVL----------HLFXXXXXXXXXXXXXXXXXXLTLRAPHQARRI 152
           + +LC+  R  EAI+VL           L                      RA  + +++
Sbjct: 50  VERLCRANRFGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKV 109

Query: 151 LAIARISG--ADLVVSNRLIHLYAKCGRVGDARKVFDEMPQRDPFSWNTII 5
               R SG    +V+ NR++ +YAKCG + DARKVFDEMP+RD  SWN ++
Sbjct: 110 HEHIRTSGFVPGIVIWNRILGMYAKCGSLVDARKVFDEMPERDVCSWNVMV 160


>ref|XP_002324099.1| predicted protein [Populus trichocarpa] gi|222867101|gb|EEF04232.1|
           predicted protein [Populus trichocarpa]
          Length = 676

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
 Frame = -3

Query: 292 LCKQERLDEAINVLHLFXXXXXXXXXXXXXXXXXXLTLRAPHQARRILAIARISG--ADL 119
           LC+Q RL EA+ +LH                      L+   Q +++    ++SG    L
Sbjct: 49  LCQQNRLKEALQILHQIDKPSASVYSTLIQSCIKSRLLQ---QGKKVHQHIKLSGFVPGL 105

Query: 118 VVSNRLIHLYAKCGRVGDARKVFDEMPQRDPFSWNTIIA 2
            + NRL+ +YAKC  + D++K+FDEMP+RD  SWN +I+
Sbjct: 106 FILNRLLEMYAKCDSLMDSQKLFDEMPERDLCSWNILIS 144


>ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
           gi|449484855|ref|XP_004156999.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
          Length = 724

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
 Frame = -3

Query: 301 ISKLCKQERLDEAINVLHLFXXXXXXXXXXXXXXXXXXLTLRAPHQARRILAIARISGA- 125
           I  LC Q RL EA+ +L+                      L+   + +++ A  + SG+ 
Sbjct: 95  IDILCGQSRLREAVQLLYRIEKPYASIYLTLLKFCLKQRALK---EGKQVHAHIKTSGSI 151

Query: 124 DLVVSNRLIHLYAKCGRVGDARKVFDEMPQRDPFSWNTIIA 2
            L +SNRL+ +YAKCG + DA KVFDEM  RD  SWN +I+
Sbjct: 152 GLYISNRLLDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMIS 192