BLASTX nr result

ID: Dioscorea21_contig00032366 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032366
         (608 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321600.1| f-box family protein [Populus trichocarpa] g...   110   1e-22
ref|XP_002318052.1| f-box family protein [Populus trichocarpa] g...   108   7e-22
gb|ADL36681.1| DOF domain class transcription factor [Malus x do...    99   4e-19
ref|XP_003527017.1| PREDICTED: dof zinc finger protein DOF5.6-li...    94   2e-17
emb|CBI15034.3| unnamed protein product [Vitis vinifera]               94   2e-17

>ref|XP_002321600.1| f-box family protein [Populus trichocarpa]
           gi|222868596|gb|EEF05727.1| f-box family protein
           [Populus trichocarpa]
          Length = 314

 Score =  110 bits (276), Expect = 1e-22
 Identities = 54/99 (54%), Positives = 72/99 (72%), Gaps = 3/99 (3%)
 Frame = -2

Query: 607 GDHHVNHQMFNNGVSG--APFGFSVEGGHGALMEACQRLALPFG-GHEEDPNAIEVKPAS 437
           GD   +H +  N  SG  +PFG S++G  G+ ME CQRL LP+  G++ D N I+VKP +
Sbjct: 211 GDMSHHHGLAPN-YSGYCSPFGMSLDGNSGSFMETCQRLMLPYDQGNDHDQNPIDVKPNT 269

Query: 436 RVLSLEWQDQGCSDVGRDSFGYSNGLGLWTGMIGSHGSS 320
           ++LSL+WQDQGCSDVG+D+FGY N LG WTGM+  +GSS
Sbjct: 270 KLLSLDWQDQGCSDVGKDTFGYLNNLGSWTGMMNGYGSS 308


>ref|XP_002318052.1| f-box family protein [Populus trichocarpa]
           gi|222858725|gb|EEE96272.1| f-box family protein
           [Populus trichocarpa]
          Length = 312

 Score =  108 bits (270), Expect = 7e-22
 Identities = 47/78 (60%), Positives = 59/78 (75%)
 Frame = -2

Query: 553 FGFSVEGGHGALMEACQRLALPFGGHEEDPNAIEVKPASRVLSLEWQDQGCSDVGRDSFG 374
           FG S++G  G  ME CQRL LP+G    D NAI+VKP +++LSL+WQDQGCSD G+D+FG
Sbjct: 229 FGMSLDGNSGTFMETCQRLMLPYGQGNNDQNAIDVKPNTKLLSLDWQDQGCSDGGKDTFG 288

Query: 373 YSNGLGLWTGMIGSHGSS 320
           Y N LG WTGM+  +GSS
Sbjct: 289 YLNNLGSWTGMMNGYGSS 306


>gb|ADL36681.1| DOF domain class transcription factor [Malus x domestica]
          Length = 327

 Score = 99.4 bits (246), Expect = 4e-19
 Identities = 49/100 (49%), Positives = 71/100 (71%), Gaps = 6/100 (6%)
 Frame = -2

Query: 601 HHVNHQMFNNGVSGAPFGFS-VEGGHGALMEACQRLALPF--GGHEEDP--NAIEVKPAS 437
           H + HQ   +G+  +PFG S ++G +G  M++CQRL LP+    HE+    NA++VKP +
Sbjct: 222 HGLEHQSSFHGICSSPFGMSSIDGQNGNFMDSCQRLMLPYDQANHEDHHQINAMDVKPNT 281

Query: 436 RVLSLEWQDQ-GCSDVGRDSFGYSNGLGLWTGMIGSHGSS 320
           ++LSLEWQDQ GCSD+G+DSFGY NGLG W+ ++ S+  S
Sbjct: 282 KLLSLEWQDQAGCSDLGKDSFGYLNGLGSWSNVMNSYAPS 321


>ref|XP_003527017.1| PREDICTED: dof zinc finger protein DOF5.6-like [Glycine max]
          Length = 353

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 51/97 (52%), Positives = 64/97 (65%), Gaps = 2/97 (2%)
 Frame = -2

Query: 604 DHHVNHQMFNNGVSGAPFGFSVEGGHGALMEACQRLALPFGGHEEDPNA-IEVKP-ASRV 431
           DH  N+   N+G +G        G +  LM++CQRL LP+    ED NA I+VKP   ++
Sbjct: 261 DHGNNNN--NSGGNG--------GSNNYLMDSCQRLMLPYASSNEDHNAPIDVKPNPKQL 310

Query: 430 LSLEWQDQGCSDVGRDSFGYSNGLGLWTGMIGSHGSS 320
           LSLEWQDQGCSD G+DSFGY NG G WTGM+  +GSS
Sbjct: 311 LSLEWQDQGCSDAGKDSFGYLNGPGSWTGMMNGYGSS 347


>emb|CBI15034.3| unnamed protein product [Vitis vinifera]
          Length = 318

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 41/76 (53%), Positives = 57/76 (75%)
 Frame = -2

Query: 559 APFGFSVEGGHGALMEACQRLALPFGGHEEDPNAIEVKPASRVLSLEWQDQGCSDVGRDS 380
           +PFG +++G  G  M+ CQRL LP+ G+ E  NA++VKP +++LSL+WQDQGCSD G+DS
Sbjct: 223 SPFGVTLDGNGGNFMDTCQRLMLPYEGNVEQ-NAMDVKPNTKLLSLDWQDQGCSDAGKDS 281

Query: 379 FGYSNGLGLWTGMIGS 332
           F Y N LG W GM+ +
Sbjct: 282 FVYLNSLGSWNGMMSN 297


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