BLASTX nr result

ID: Dioscorea21_contig00032191 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032191
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003560887.1| PREDICTED: pentatricopeptide repeat-containi...    87   1e-15
ref|XP_004168978.1| PREDICTED: pentatricopeptide repeat-containi...    86   3e-15
ref|XP_004144924.1| PREDICTED: pentatricopeptide repeat-containi...    86   4e-15
emb|CBI37820.3| unnamed protein product [Vitis vinifera]               83   2e-14
ref|XP_002436750.1| hypothetical protein SORBIDRAFT_10g008110 [S...    83   2e-14

>ref|XP_003560887.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial-like [Brachypodium distachyon]
          Length = 676

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 46/92 (50%), Positives = 61/92 (66%), Gaps = 1/92 (1%)
 Frame = -1

Query: 299 SWNTMINGLARNGRIDKALHLLERIPVRKVASHSALVSSLIRNSKLIEAENVL-KSECTR 123
           SWNTM+ G    G+++KAL + + +PV+  AS   LVS  I+N +L EAE +L K     
Sbjct: 159 SWNTMVTGFFSAGQVNKALDMFDAMPVKDSASLGTLVSGFIKNGRLHEAEELLTKRLRVT 218

Query: 122 DIKGVVDAYNTLIAGYGQGGKIEDACQLFDMI 27
           D+   VDAYNTLIA YGQ G++ DA +LFDMI
Sbjct: 219 DMDEAVDAYNTLIAAYGQVGRVSDARRLFDMI 250


>ref|XP_004168978.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial-like [Cucumis sativus]
          Length = 664

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 47/92 (51%), Positives = 60/92 (65%), Gaps = 1/92 (1%)
 Frame = -1

Query: 299 SWNTMINGLARNGRIDKALHLLERIPVRKVASHSALVSSLIRNSKLIEAENVLKSECTRD 120
           SWN M++G   NG ++KA+   + +P R  AS  ALVS LI+N KL+EAE +L       
Sbjct: 185 SWNAMVSGYLMNGHVEKAIEFFKLMPKRDSASLRALVSGLIQNDKLVEAERILLQYGGNV 244

Query: 119 IKG-VVDAYNTLIAGYGQGGKIEDACQLFDMI 27
            KG +VDAYNTLIAGYGQ G   +A +LFD I
Sbjct: 245 GKGDLVDAYNTLIAGYGQKGMAYEARKLFDRI 276


>ref|XP_004144924.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial-like [Cucumis sativus]
          Length = 664

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 46/92 (50%), Positives = 60/92 (65%), Gaps = 1/92 (1%)
 Frame = -1

Query: 299 SWNTMINGLARNGRIDKALHLLERIPVRKVASHSALVSSLIRNSKLIEAENVLKSECTRD 120
           SWN M++G   NG ++KA+   + +P R  AS  AL+S LI+N KL+EAE +L       
Sbjct: 185 SWNAMVSGYLMNGHVEKAIEFFKLMPKRDSASLRALISGLIQNDKLVEAERILLQYGGNV 244

Query: 119 IKG-VVDAYNTLIAGYGQGGKIEDACQLFDMI 27
            KG +VDAYNTLIAGYGQ G   +A +LFD I
Sbjct: 245 GKGDLVDAYNTLIAGYGQKGMAYEARKLFDRI 276


>emb|CBI37820.3| unnamed protein product [Vitis vinifera]
          Length = 504

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 45/93 (48%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
 Frame = -1

Query: 299 SWNTMINGLARNGRIDKALHLLERIPVRKVASHSALVSSLIRNSKLIEAENV-LKSECTR 123
           SWN M+ G  +NG +++A+    R+P R  AS SALV+ LI+N +L EA+ + L S    
Sbjct: 18  SWNAMVTGFLQNGDVERAIEFFMRMPERDSASLSALVAGLIQNGELDEAKRILLTSRRQD 77

Query: 122 DIKG-VVDAYNTLIAGYGQGGKIEDACQLFDMI 27
           D KG +V AYN L+AGYGQ G+++ A QLFD I
Sbjct: 78  DDKGDLVHAYNILLAGYGQNGRVDKARQLFDQI 110


>ref|XP_002436750.1| hypothetical protein SORBIDRAFT_10g008110 [Sorghum bicolor]
           gi|241914973|gb|EER88117.1| hypothetical protein
           SORBIDRAFT_10g008110 [Sorghum bicolor]
          Length = 672

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 46/92 (50%), Positives = 61/92 (66%), Gaps = 1/92 (1%)
 Frame = -1

Query: 299 SWNTMINGLARNGRIDKALHLLERIPVRKVASHSALVSSLIRNSKLIEAENVL-KSECTR 123
           SWNTM+ G    G++ KAL++ E +PV+  AS SA+VS  IRN  L EA+ +L K     
Sbjct: 165 SWNTMVTGFFAIGQMRKALNVFEAMPVKDSASLSAMVSGFIRNGWLHEADELLTKRLRAM 224

Query: 122 DIKGVVDAYNTLIAGYGQGGKIEDACQLFDMI 27
           D+   VDA+NTLIA YGQ G++ DA +LF MI
Sbjct: 225 DMDKAVDAFNTLIAAYGQTGRVTDARRLFSMI 256


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