BLASTX nr result
ID: Dioscorea21_contig00032158
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00032158 (421 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002455379.1| hypothetical protein SORBIDRAFT_03g009590 [S... 80 1e-13 gb|AFW79695.1| hypothetical protein ZEAMMB73_397300 [Zea mays] 74 2e-11 emb|CBI39646.3| unnamed protein product [Vitis vinifera] 70 2e-10 sp|Q0JP11.2|C3H3_ORYSJ RecName: Full=Zinc finger CCCH domain-con... 64 1e-08 ref|XP_002318931.1| predicted protein [Populus trichocarpa] gi|2... 63 2e-08 >ref|XP_002455379.1| hypothetical protein SORBIDRAFT_03g009590 [Sorghum bicolor] gi|241927354|gb|EES00499.1| hypothetical protein SORBIDRAFT_03g009590 [Sorghum bicolor] Length = 164 Score = 80.5 bits (197), Expect = 1e-13 Identities = 42/107 (39%), Positives = 54/107 (50%), Gaps = 7/107 (6%) Frame = +1 Query: 49 GNIPQGVCHHFVRTGICKFGDSCKYFHPQHNVLNPAQNVAGTSIMRTLQPPVFPGNQP-- 222 G + +G+CHHFVRTG CK+GDSC+YFHP+ + +NPA G+ +Q F GNQP Sbjct: 59 GTLAKGICHHFVRTGTCKYGDSCRYFHPKPDGVNPALAAPGSGPGPMVQQSDFIGNQPNF 118 Query: 223 -----PGTNLSSGNSIGDAGISWXXXXXXXXXXXXXXXXXXXFIDWG 348 P N SGN +G +W FIDWG Sbjct: 119 VGYQGPDRNSFSGNILG-GHTAWGNLPPSLQPPPEGGYPPLPFIDWG 164 >gb|AFW79695.1| hypothetical protein ZEAMMB73_397300 [Zea mays] Length = 166 Score = 73.6 bits (179), Expect = 2e-11 Identities = 42/109 (38%), Positives = 52/109 (47%), Gaps = 9/109 (8%) Frame = +1 Query: 49 GNIPQGVCHHFVRTGICKFGDSCKYFHPQHNVLNPAQNV--AGTSIMRTLQPPVFPGNQP 222 G + +G+CHHFVRTG CK+GDSC+YFHP+ N +NPA G+ +Q GNQP Sbjct: 59 GTLAKGICHHFVRTGACKYGDSCRYFHPKPNGVNPALAAPGLGSGPAPMVQQSDIIGNQP 118 Query: 223 -------PGTNLSSGNSIGDAGISWXXXXXXXXXXXXXXXXXXXFIDWG 348 N SSG +G SW FIDWG Sbjct: 119 NFVVYQGVDINSSSGKILG-GHASWGNLPPSLQPPPEGGYPPLPFIDWG 166 >emb|CBI39646.3| unnamed protein product [Vitis vinifera] Length = 152 Score = 69.7 bits (169), Expect = 2e-10 Identities = 37/98 (37%), Positives = 50/98 (51%), Gaps = 2/98 (2%) Frame = +1 Query: 61 QGVCHHFVRTGICKFGDSCKYFHPQHNVLNP-AQNVAGTSIMRTLQPPVFPGNQPPGTNL 237 +GVC+ FVRTG C++GDSCKYFHP+ ++ N Q++ T +Q PGNQ G Sbjct: 55 KGVCNRFVRTGFCQYGDSCKYFHPKQSLQNTNTQSIPVTGFPDNIQSLSNPGNQLVGGGP 114 Query: 238 SSGNSIGDA-GISWXXXXXXXXXXXXXXXXXXXFIDWG 348 GN + D+ G SW F+DWG Sbjct: 115 LPGNVVKDSMGNSWGNLPPSLKPPPEGGYPPLPFLDWG 152 >sp|Q0JP11.2|C3H3_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 3; Short=OsC3H3 gi|215701065|dbj|BAG92489.1| unnamed protein product [Oryza sativa Japonica Group] gi|218187901|gb|EEC70328.1| hypothetical protein OsI_01197 [Oryza sativa Indica Group] gi|222618113|gb|EEE54245.1| hypothetical protein OsJ_01120 [Oryza sativa Japonica Group] Length = 167 Score = 63.9 bits (154), Expect = 1e-08 Identities = 38/102 (37%), Positives = 44/102 (43%), Gaps = 7/102 (6%) Frame = +1 Query: 64 GVCHHFVRTGICKFGDSCKYFHPQHNVLNPAQNVAGTSIMRTLQ-------PPVFPGNQP 222 GVC HFVRTG CKFGDSC+YFHP+ NP +G Q P F G Q Sbjct: 67 GVCQHFVRTGTCKFGDSCRYFHPKPPPANPGPAPSGPVSGPMAQQSNIQGSQPNFVGYQA 126 Query: 223 PGTNLSSGNSIGDAGISWXXXXXXXXXXXXXXXXXXXFIDWG 348 + SGN +G SW F+DWG Sbjct: 127 ADGSSFSGNILG-GHTSWGNLPPSLRPPPEGGYPPFPFVDWG 167 >ref|XP_002318931.1| predicted protein [Populus trichocarpa] gi|222857307|gb|EEE94854.1| predicted protein [Populus trichocarpa] Length = 150 Score = 63.2 bits (152), Expect = 2e-08 Identities = 36/111 (32%), Positives = 50/111 (45%), Gaps = 1/111 (0%) Frame = +1 Query: 19 AGGFVFVQSHGNIPQGVCHHFVRTGICKFGDSCKYFHPQHNVLNPAQNVAGTSIMRTLQP 198 AGGFV +G+C+ FV+TG C +GDSCKY H GT+ +Q Sbjct: 55 AGGFV---------KGLCNRFVKTGFCPYGDSCKYLHTNF------ATSQGTAFKDNVQS 99 Query: 199 PVFPGNQPPGTNLSSGNSIGDA-GISWXXXXXXXXXXXXXXXXXXXFIDWG 348 P PGNQ G + G ++ ++ G+SW F+DWG Sbjct: 100 PTMPGNQLAGGSSFPGVAVRESMGMSWGNLPPSLKPPPEGGYPPLPFVDWG 150