BLASTX nr result

ID: Dioscorea21_contig00032158 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032158
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002455379.1| hypothetical protein SORBIDRAFT_03g009590 [S...    80   1e-13
gb|AFW79695.1| hypothetical protein ZEAMMB73_397300 [Zea mays]         74   2e-11
emb|CBI39646.3| unnamed protein product [Vitis vinifera]               70   2e-10
sp|Q0JP11.2|C3H3_ORYSJ RecName: Full=Zinc finger CCCH domain-con...    64   1e-08
ref|XP_002318931.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08

>ref|XP_002455379.1| hypothetical protein SORBIDRAFT_03g009590 [Sorghum bicolor]
           gi|241927354|gb|EES00499.1| hypothetical protein
           SORBIDRAFT_03g009590 [Sorghum bicolor]
          Length = 164

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 42/107 (39%), Positives = 54/107 (50%), Gaps = 7/107 (6%)
 Frame = +1

Query: 49  GNIPQGVCHHFVRTGICKFGDSCKYFHPQHNVLNPAQNVAGTSIMRTLQPPVFPGNQP-- 222
           G + +G+CHHFVRTG CK+GDSC+YFHP+ + +NPA    G+     +Q   F GNQP  
Sbjct: 59  GTLAKGICHHFVRTGTCKYGDSCRYFHPKPDGVNPALAAPGSGPGPMVQQSDFIGNQPNF 118

Query: 223 -----PGTNLSSGNSIGDAGISWXXXXXXXXXXXXXXXXXXXFIDWG 348
                P  N  SGN +G    +W                   FIDWG
Sbjct: 119 VGYQGPDRNSFSGNILG-GHTAWGNLPPSLQPPPEGGYPPLPFIDWG 164


>gb|AFW79695.1| hypothetical protein ZEAMMB73_397300 [Zea mays]
          Length = 166

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 42/109 (38%), Positives = 52/109 (47%), Gaps = 9/109 (8%)
 Frame = +1

Query: 49  GNIPQGVCHHFVRTGICKFGDSCKYFHPQHNVLNPAQNV--AGTSIMRTLQPPVFPGNQP 222
           G + +G+CHHFVRTG CK+GDSC+YFHP+ N +NPA      G+     +Q     GNQP
Sbjct: 59  GTLAKGICHHFVRTGACKYGDSCRYFHPKPNGVNPALAAPGLGSGPAPMVQQSDIIGNQP 118

Query: 223 -------PGTNLSSGNSIGDAGISWXXXXXXXXXXXXXXXXXXXFIDWG 348
                     N SSG  +G    SW                   FIDWG
Sbjct: 119 NFVVYQGVDINSSSGKILG-GHASWGNLPPSLQPPPEGGYPPLPFIDWG 166


>emb|CBI39646.3| unnamed protein product [Vitis vinifera]
          Length = 152

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 37/98 (37%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
 Frame = +1

Query: 61  QGVCHHFVRTGICKFGDSCKYFHPQHNVLNP-AQNVAGTSIMRTLQPPVFPGNQPPGTNL 237
           +GVC+ FVRTG C++GDSCKYFHP+ ++ N   Q++  T     +Q    PGNQ  G   
Sbjct: 55  KGVCNRFVRTGFCQYGDSCKYFHPKQSLQNTNTQSIPVTGFPDNIQSLSNPGNQLVGGGP 114

Query: 238 SSGNSIGDA-GISWXXXXXXXXXXXXXXXXXXXFIDWG 348
             GN + D+ G SW                   F+DWG
Sbjct: 115 LPGNVVKDSMGNSWGNLPPSLKPPPEGGYPPLPFLDWG 152


>sp|Q0JP11.2|C3H3_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 3;
           Short=OsC3H3 gi|215701065|dbj|BAG92489.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|218187901|gb|EEC70328.1| hypothetical protein
           OsI_01197 [Oryza sativa Indica Group]
           gi|222618113|gb|EEE54245.1| hypothetical protein
           OsJ_01120 [Oryza sativa Japonica Group]
          Length = 167

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 38/102 (37%), Positives = 44/102 (43%), Gaps = 7/102 (6%)
 Frame = +1

Query: 64  GVCHHFVRTGICKFGDSCKYFHPQHNVLNPAQNVAGTSIMRTLQ-------PPVFPGNQP 222
           GVC HFVRTG CKFGDSC+YFHP+    NP    +G       Q        P F G Q 
Sbjct: 67  GVCQHFVRTGTCKFGDSCRYFHPKPPPANPGPAPSGPVSGPMAQQSNIQGSQPNFVGYQA 126

Query: 223 PGTNLSSGNSIGDAGISWXXXXXXXXXXXXXXXXXXXFIDWG 348
              +  SGN +G    SW                   F+DWG
Sbjct: 127 ADGSSFSGNILG-GHTSWGNLPPSLRPPPEGGYPPFPFVDWG 167


>ref|XP_002318931.1| predicted protein [Populus trichocarpa] gi|222857307|gb|EEE94854.1|
           predicted protein [Populus trichocarpa]
          Length = 150

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 36/111 (32%), Positives = 50/111 (45%), Gaps = 1/111 (0%)
 Frame = +1

Query: 19  AGGFVFVQSHGNIPQGVCHHFVRTGICKFGDSCKYFHPQHNVLNPAQNVAGTSIMRTLQP 198
           AGGFV         +G+C+ FV+TG C +GDSCKY H             GT+    +Q 
Sbjct: 55  AGGFV---------KGLCNRFVKTGFCPYGDSCKYLHTNF------ATSQGTAFKDNVQS 99

Query: 199 PVFPGNQPPGTNLSSGNSIGDA-GISWXXXXXXXXXXXXXXXXXXXFIDWG 348
           P  PGNQ  G +   G ++ ++ G+SW                   F+DWG
Sbjct: 100 PTMPGNQLAGGSSFPGVAVRESMGMSWGNLPPSLKPPPEGGYPPLPFVDWG 150


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