BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00031954
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303975.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11
ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containi...    72   6e-11
ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containi...    71   1e-10
ref|NP_197034.2| pentatricopeptide repeat-containing protein [Ar...    70   1e-10
ref|XP_002872288.1| pentatricopeptide repeat-containing protein ...    70   1e-10

>ref|XP_002303975.1| predicted protein [Populus trichocarpa] gi|222841407|gb|EEE78954.1|
           predicted protein [Populus trichocarpa]
          Length = 508

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 34/75 (45%), Positives = 45/75 (60%)
 Frame = +1

Query: 34  KTVQVWXXXXXXXXXXXXXXXALQMFDEMQRALVQPNSITFIALLCGCAHAGLVEEGKRY 213
           KT+  W               AL+MF  M+RA V+PN ITFIA+L  C+H GLV+ G+ Y
Sbjct: 279 KTIITWTTMIAGLALHGLGTEALEMFSRMERARVKPNDITFIAILSACSHVGLVQTGRWY 338

Query: 214 FGLMRSKYGIEPGVK 258
           F  M S+YGIEP ++
Sbjct: 339 FNRMISRYGIEPKIE 353


>ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Vitis vinifera]
          Length = 541

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 31/54 (57%), Positives = 41/54 (75%)
 Frame = +1

Query: 97  ALQMFDEMQRALVQPNSITFIALLCGCAHAGLVEEGKRYFGLMRSKYGIEPGVK 258
           A+++F EMQ+A ++PN ITF+ LL  CAHAGL+ EG RYF  M+  Y IEPGV+
Sbjct: 334 AIELFQEMQKAKIEPNIITFVGLLSACAHAGLLNEGLRYFESMKRDYNIEPGVE 387


>ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 849

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 30/84 (35%), Positives = 52/84 (61%)
 Frame = +1

Query: 4   KMFDLLPNSAKTVQVWXXXXXXXXXXXXXXXALQMFDEMQRALVQPNSITFIALLCGCAH 183
           K+FD++    + V  W               AL++F++M++ +++PN +TF+ +L  C+H
Sbjct: 534 KLFDMMDE--RHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSH 591

Query: 184 AGLVEEGKRYFGLMRSKYGIEPGV 255
           +GLVEEG +YFG M+  YG+EP +
Sbjct: 592 SGLVEEGFQYFGSMKKDYGLEPAM 615


>ref|NP_197034.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|223635759|sp|Q9LXF2.2|PP385_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g15300 gi|332004762|gb|AED92145.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 548

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 28/54 (51%), Positives = 41/54 (75%)
 Frame = +1

Query: 97  ALQMFDEMQRALVQPNSITFIALLCGCAHAGLVEEGKRYFGLMRSKYGIEPGVK 258
           +++MF+EMQR  V PN +TFI ++  C+H+G V+EG++YF LMR  Y IEP +K
Sbjct: 364 SIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIK 417


>ref|XP_002872288.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297318125|gb|EFH48547.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 690

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 35/85 (41%), Positives = 50/85 (58%)
 Frame = +1

Query: 4   KMFDLLPNSAKTVQVWXXXXXXXXXXXXXXXALQMFDEMQRALVQPNSITFIALLCGCAH 183
           ++F+ +P   K V  W               AL  FDEMQ+  V+P+ +TF+A+L  C H
Sbjct: 465 RIFNSIPK--KDVVSWTVMISAYGSHGQPREALYHFDEMQKFGVKPDGVTFLAVLSACGH 522

Query: 184 AGLVEEGKRYFGLMRSKYGIEPGVK 258
           AGL++EG +YF  MRSKYGIE  ++
Sbjct: 523 AGLIDEGVKYFSQMRSKYGIEASIE 547