BLASTX nr result

ID: Dioscorea21_contig00031682 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00031682
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003600227.1| NBS-containing resistance-like protein [Medi...    74   9e-12
gb|ACL28165.1| NBS-LRR resistance-like protein RGC1C, partial [L...    74   9e-12
ref|NP_001059072.1| Os07g0186500 [Oryza sativa Japonica Group] g...    74   1e-11
gb|AAC02202.1| resistance protein candidate [Lactuca sativa] gi|...    72   4e-11
ref|XP_003600228.1| Cc-nbs resistance protein [Medicago truncatu...    72   4e-11

>ref|XP_003600227.1| NBS-containing resistance-like protein [Medicago truncatula]
           gi|355489275|gb|AES70478.1| NBS-containing
           resistance-like protein [Medicago truncatula]
          Length = 719

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 38/86 (44%), Positives = 59/86 (68%)
 Frame = -1

Query: 295 DADVVGRFNDEKILLERLLMNHHGQQQQQGSCVISIVGLGGIGKTTLARKLYRSNAVINH 116
           +A+VVG     KIL++ ++      Q ++   V+S+VG+GG GKTTLA+K++ S  +I H
Sbjct: 9   EAEVVGFEAPRKILIDWMV------QGREERTVVSVVGMGGQGKTTLAKKVFDSKDIIGH 62

Query: 115 FQNRIWLTVSQENSVKGLLKMMLVKV 38
           F  R+W+TVSQ   V+GLL+ ML+K+
Sbjct: 63  FHFRVWITVSQSYDVEGLLRDMLLKI 88


>gb|ACL28165.1| NBS-LRR resistance-like protein RGC1C, partial [Lactuca sativa]
          Length = 345

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 38/98 (38%), Positives = 62/98 (63%)
 Frame = -1

Query: 304 LPDDADVVGRFNDEKILLERLLMNHHGQQQQQGSCVISIVGLGGIGKTTLARKLYRSNAV 125
           L D + ++GR +D+K LL++LL + + +   Q   ++ IVG+GG+GKTTLAR LY    V
Sbjct: 128 LVDASGIIGREDDKKKLLQKLLGDTY-ESSSQNFNIVPIVGMGGVGKTTLARLLYDEKKV 186

Query: 124 INHFQNRIWLTVSQENSVKGLLKMMLVKVSGDGNNNLD 11
            +HF+ R+W+ VS E SV  + +++   V+G+     D
Sbjct: 187 KDHFELRVWVCVSDEFSVPNISRVIYQSVTGENKEFAD 224


>ref|NP_001059072.1| Os07g0186500 [Oryza sativa Japonica Group]
           gi|33146917|dbj|BAC79938.1| putative disease resistance
           protein RPR1 [Oryza sativa Japonica Group]
           gi|113610608|dbj|BAF20986.1| Os07g0186500 [Oryza sativa
           Japonica Group] gi|125599377|gb|EAZ38953.1| hypothetical
           protein OsJ_23373 [Oryza sativa Japonica Group]
          Length = 906

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 44/110 (40%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
 Frame = -1

Query: 331 PVRRHH---FRPLPDDADVVGRFNDEKILLERLLMNHHGQQQQQGSCVISIVGLGGIGKT 161
           P R HH   +  L DD D+VG   + K L+E L         ++   VISI G+GG+GKT
Sbjct: 158 PSRHHHLSEYSYLNDDDDLVGNAEEMKRLIEWLC------DAKKDRSVISICGMGGLGKT 211

Query: 160 TLARKLYRSNAVINHFQNRIWLTVSQENSVKGLLKMMLVKVSGDGNNNLD 11
           TLA  +Y+   +   F  R W+TVSQ + VK LLK +LV++     N +D
Sbjct: 212 TLASSIYKKEEIKRTFICRAWITVSQNHGVKNLLKKILVQLMSKTENIMD 261


>gb|AAC02202.1| resistance protein candidate [Lactuca sativa]
           gi|219563669|gb|ACL28164.1| NBS-LRR resistance-like
           protein RGC1A, partial [Lactuca sativa]
          Length = 775

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 39/95 (41%), Positives = 60/95 (63%), Gaps = 3/95 (3%)
 Frame = -1

Query: 304 LPDDADVVGRFNDEKILLERLLMNHHGQQQQQGS---CVISIVGLGGIGKTTLARKLYRS 134
           L D++ + GR +D+  LLE+LL    G + + GS    ++ IVG+GG+GKTTLAR LY  
Sbjct: 160 LVDESGIFGRVDDKNKLLEKLL----GDRDESGSQNFSIVPIVGMGGVGKTTLARLLYDE 215

Query: 133 NAVINHFQNRIWLTVSQENSVKGLLKMMLVKVSGD 29
             V +HF+ R W+ VS E SV  + +++   V+G+
Sbjct: 216 KKVKDHFELRAWVCVSDEFSVPNISRVIYQSVTGE 250


>ref|XP_003600228.1| Cc-nbs resistance protein [Medicago truncatula]
           gi|355489276|gb|AES70479.1| Cc-nbs resistance protein
           [Medicago truncatula]
          Length = 983

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 39/86 (45%), Positives = 58/86 (67%)
 Frame = -1

Query: 298 DDADVVGRFNDEKILLERLLMNHHGQQQQQGSCVISIVGLGGIGKTTLARKLYRSNAVIN 119
           ++ADVVG      IL++ ++    G+ ++    V+S+VG+GG GKTTLA+K + S  V+ 
Sbjct: 167 EEADVVGFDKQRDILIDWMIK---GRAERT---VVSVVGMGGQGKTTLAKKAFDSKDVVG 220

Query: 118 HFQNRIWLTVSQENSVKGLLKMMLVK 41
           HF  R+W+TVSQ   V+GLLK ML+K
Sbjct: 221 HFDCRVWITVSQAYDVEGLLKDMLLK 246


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