BLASTX nr result

ID: Dioscorea21_contig00031637 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00031637
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277289.2| PREDICTED: uncharacterized protein LOC100264...    71   1e-10
emb|CBI37915.3| unnamed protein product [Vitis vinifera]               71   1e-10
emb|CAN77165.1| hypothetical protein VITISV_029834 [Vitis vinifera]    61   8e-08
ref|XP_003607275.1| Nucleoporin NUP188-like protein [Medicago tr...    57   2e-06
ref|NP_195587.5| uncharacterized protein [Arabidopsis thaliana] ...    55   6e-06

>ref|XP_002277289.2| PREDICTED: uncharacterized protein LOC100264071 [Vitis vinifera]
          Length = 1983

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 37/98 (37%), Positives = 61/98 (62%)
 Frame = +3

Query: 3    VLEIMAQEMFFLKKFLCQDMMEKQTSEASKEGIQALTTTDNLEAANVLNLKDILSAWCKS 182
            VLEIMA+++F  KK L  + + K  +E+SKE        +   + N+ +LKD+LS+WC++
Sbjct: 1098 VLEIMAEDLFLQKKLLHAEFLVKLAAESSKEKTGTTVGLEKSRSENLHHLKDVLSSWCEN 1157

Query: 183  PTVENLIKSCSSVRSIQDIGLHAKMTVCLCVMHLMCKL 296
              + +LIKS +S +   +I L AK+   L ++H+M KL
Sbjct: 1158 SVLVDLIKSYASCQYDTEIYLRAKIAASLFIVHVMGKL 1195


>emb|CBI37915.3| unnamed protein product [Vitis vinifera]
          Length = 1958

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 37/98 (37%), Positives = 61/98 (62%)
 Frame = +3

Query: 3    VLEIMAQEMFFLKKFLCQDMMEKQTSEASKEGIQALTTTDNLEAANVLNLKDILSAWCKS 182
            VLEIMA+++F  KK L  + + K  +E+SKE        +   + N+ +LKD+LS+WC++
Sbjct: 1121 VLEIMAEDLFLQKKLLHAEFLVKLAAESSKEKTGTTVGLEKSRSENLHHLKDVLSSWCEN 1180

Query: 183  PTVENLIKSCSSVRSIQDIGLHAKMTVCLCVMHLMCKL 296
              + +LIKS +S +   +I L AK+   L ++H+M KL
Sbjct: 1181 SVLVDLIKSYASCQYDTEIYLRAKIAASLFIVHVMGKL 1218


>emb|CAN77165.1| hypothetical protein VITISV_029834 [Vitis vinifera]
          Length = 1391

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 32/85 (37%), Positives = 53/85 (62%)
 Frame = +3

Query: 3   VLEIMAQEMFFLKKFLCQDMMEKQTSEASKEGIQALTTTDNLEAANVLNLKDILSAWCKS 182
           VLEIMA+++F  KK L  + + K  +E+SKE        +   + N+ +LKD+LS+WC++
Sbjct: 477 VLEIMAEDLFLQKKLLHAEFLVKLAAESSKEKTGTTVGLEKSRSENLHHLKDVLSSWCEN 536

Query: 183 PTVENLIKSCSSVRSIQDIGLHAKM 257
             + +LIKS +S +   +I L AK+
Sbjct: 537 SVLVDLIKSYASCQYDTEIYLRAKV 561


>ref|XP_003607275.1| Nucleoporin NUP188-like protein [Medicago truncatula]
            gi|355508330|gb|AES89472.1| Nucleoporin NUP188-like
            protein [Medicago truncatula]
          Length = 1967

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 35/98 (35%), Positives = 56/98 (57%)
 Frame = +3

Query: 3    VLEIMAQEMFFLKKFLCQDMMEKQTSEASKEGIQALTTTDNLEAANVLNLKDILSAWCKS 182
            +L IMA E+F  KK L  + + K ++E SK+  Q  T T+  ++A++ +LK + S+W K 
Sbjct: 1099 ILGIMAYELFLQKKLLHAESLVKNSAE-SKDKEQNATRTEKSKSADLHDLKGVWSSWFKD 1157

Query: 183  PTVENLIKSCSSVRSIQDIGLHAKMTVCLCVMHLMCKL 296
              +E LIK  +S     D+   AK+   L  +H+M KL
Sbjct: 1158 SVLEKLIKLYTSCGHKSDVYDSAKVATSLFCVHVMLKL 1195


>ref|NP_195587.5| uncharacterized protein [Arabidopsis thaliana]
            gi|332661571|gb|AEE86971.1| uncharacterized protein
            [Arabidopsis thaliana]
          Length = 1965

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 33/98 (33%), Positives = 50/98 (51%)
 Frame = +3

Query: 3    VLEIMAQEMFFLKKFLCQDMMEKQTSEASKEGIQALTTTDNLEAANVLNLKDILSAWCKS 182
            VLEIMA  MF  KK L  + ++K   E  K     ++       A+  + KDI S WC  
Sbjct: 1090 VLEIMACNMFLYKKLLFAESLKKPCVETKKTASNGVSPPKLTWTADS-DPKDIFSKWCDI 1148

Query: 183  PTVENLIKSCSSVRSIQDIGLHAKMTVCLCVMHLMCKL 296
              ++ +I+S SS+    +I   AK+   L ++HL+ KL
Sbjct: 1149 SVLDGIIQSVSSLDGESEINFQAKVAAVLLIVHLIVKL 1186


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