BLASTX nr result

ID: Dioscorea21_contig00031558 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00031558
         (658 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20464.3| unnamed protein product [Vitis vinifera]              169   6e-40
ref|XP_002280346.1| PREDICTED: WD repeat-containing protein 25-l...   169   6e-40
ref|XP_003541035.1| PREDICTED: LOW QUALITY PROTEIN: WD repeat-co...   166   5e-39
ref|NP_200263.2| transducin/WD40 domain-containing protein [Arab...   150   2e-34
ref|XP_002866048.1| WD-40 repeat family protein [Arabidopsis lyr...   150   2e-34

>emb|CBI20464.3| unnamed protein product [Vitis vinifera]
          Length = 506

 Score =  169 bits (427), Expect = 6e-40
 Identities = 93/219 (42%), Positives = 123/219 (56%)
 Frame = -1

Query: 658 MDLLCSAYAEPSDDEDETLNDHRVAKRHRSRQHHAPAGDPSPSNRRHIHRPSLTDPAEPA 479
           MDLLC+AY+ PSDD+D+                  P  +P+P   +     +     +P 
Sbjct: 89  MDLLCNAYSTPSDDDDD---------------EPRPVAEPTPPPLKRFKPQNPPLLPKPY 133

Query: 478 SLSTSRYISKRERAMXXXXXXXXXXXXXXXXXXXXXAGTSPAADAIFNTDLLPNVLVKLR 299
            L   RYISKRER++                        SP   +I ++DL  ++L  LR
Sbjct: 134 PLIAGRYISKRERSLLSPALSPPLPNPAA--------SASPVMGSISDSDLPRDILSSLR 185

Query: 298 SQAPFHSQSSNITGKLSVALTGHSKAVNSIQWSLNQAHLLASAGMDQKVHVWNVWSKNQK 119
            QA   SQ   I+ +LSV L  H K+VN+IQWS   AHLLASAGMD  + +WN WS++QK
Sbjct: 186 HQAKGRSQLGRISERLSVDLKSHKKSVNTIQWSPTHAHLLASAGMDHAICIWNAWSRDQK 245

Query: 118 KACSLEHHNAAVKDVRWSPQGLSLLSCGYDCSTRLVDIE 2
           KA    +HNAAVKDV+W  QGLS+LSCGYDCS+RL+D+E
Sbjct: 246 KAREFSYHNAAVKDVKWLQQGLSVLSCGYDCSSRLIDVE 284


>ref|XP_002280346.1| PREDICTED: WD repeat-containing protein 25-like [Vitis vinifera]
          Length = 418

 Score =  169 bits (427), Expect = 6e-40
 Identities = 93/219 (42%), Positives = 123/219 (56%)
 Frame = -1

Query: 658 MDLLCSAYAEPSDDEDETLNDHRVAKRHRSRQHHAPAGDPSPSNRRHIHRPSLTDPAEPA 479
           MDLLC+AY+ PSDD+D+                  P  +P+P   +     +     +P 
Sbjct: 1   MDLLCNAYSTPSDDDDD---------------EPRPVAEPTPPPLKRFKPQNPPLLPKPY 45

Query: 478 SLSTSRYISKRERAMXXXXXXXXXXXXXXXXXXXXXAGTSPAADAIFNTDLLPNVLVKLR 299
            L   RYISKRER++                        SP   +I ++DL  ++L  LR
Sbjct: 46  PLIAGRYISKRERSLLSPALSPPLPNPAA--------SASPVMGSISDSDLPRDILSSLR 97

Query: 298 SQAPFHSQSSNITGKLSVALTGHSKAVNSIQWSLNQAHLLASAGMDQKVHVWNVWSKNQK 119
            QA   SQ   I+ +LSV L  H K+VN+IQWS   AHLLASAGMD  + +WN WS++QK
Sbjct: 98  HQAKGRSQLGRISERLSVDLKSHKKSVNTIQWSPTHAHLLASAGMDHAICIWNAWSRDQK 157

Query: 118 KACSLEHHNAAVKDVRWSPQGLSLLSCGYDCSTRLVDIE 2
           KA    +HNAAVKDV+W  QGLS+LSCGYDCS+RL+D+E
Sbjct: 158 KAREFSYHNAAVKDVKWLQQGLSVLSCGYDCSSRLIDVE 196


>ref|XP_003541035.1| PREDICTED: LOW QUALITY PROTEIN: WD repeat-containing protein
           25-like [Glycine max]
          Length = 417

 Score =  166 bits (419), Expect = 5e-39
 Identities = 97/222 (43%), Positives = 125/222 (56%), Gaps = 3/222 (1%)
 Frame = -1

Query: 658 MDLLCSAYAEPSDDEDETLNDHRVAKRHRSRQHHAPAGDPSPSNRRHIHRPSLTDPA--- 488
           MDLLC+AY+  SD EDE   +    KR R          P+P  R   H P  + P+   
Sbjct: 1   MDLLCNAYSNASDHEDE---EEEPPKRQR-----VSLSSPNPLKR---HLPLSSHPSFNH 49

Query: 487 EPASLSTSRYISKRERAMXXXXXXXXXXXXXXXXXXXXXAGTSPAADAIFNTDLLPNVLV 308
           +  +    RYISKR+RA+                             +I + D+  N+L 
Sbjct: 50  QTQAPMPGRYISKRQRALMAPPLPLFLTRSW----------------SILDADIHHNILS 93

Query: 307 KLRSQAPFHSQSSNITGKLSVALTGHSKAVNSIQWSLNQAHLLASAGMDQKVHVWNVWSK 128
            L+S+A  H   + I+ KLS +L GH+KAVN+I WS   AHLLASAGMD  V +WNVW +
Sbjct: 94  LLKSKAKGHQSPNLISEKLSASLYGHTKAVNAIHWSSTHAHLLASAGMDHAVCIWNVWGR 153

Query: 127 NQKKACSLEHHNAAVKDVRWSPQGLSLLSCGYDCSTRLVDIE 2
           NQKKAC L  HNAAVKDV+WS QG  LLSCGYDC++RL+D+E
Sbjct: 154 NQKKACVLNFHNAAVKDVKWSQQGHFLLSCGYDCTSRLIDVE 195


>ref|NP_200263.2| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
           gi|332009122|gb|AED96505.1| transducin/WD40
           domain-containing protein [Arabidopsis thaliana]
          Length = 457

 Score =  150 bits (380), Expect = 2e-34
 Identities = 88/238 (36%), Positives = 131/238 (55%), Gaps = 19/238 (7%)
 Frame = -1

Query: 658 MDLLCSAYAEPSDDEDETLNDHRVAKRHRSRQHHAPAGDPSPSNRRHIHRP--------- 506
           MDL+C++YA  SDDE E + + R+  +  +     P+  P P      ++P         
Sbjct: 1   MDLICNSYANDSDDEPEPVTNERLTSKIAAAPS-IPSKRPYPVPEERQYKPPRRPYPPHG 59

Query: 505 SLTDPAEPASLST---------SRYISKRERAMXXXXXXXXXXXXXXXXXXXXXAGTSPA 353
           S ++    +S S           RY+SKRER++                       +SP 
Sbjct: 60  SYSESQTSSSFSIPVPVPVPVPGRYVSKRERSLLASLSTIPTPDQSSDLSQKPY--SSPT 117

Query: 352 A-DAIFNTDLLPNVLVKLRSQAPFHSQSSNITGKLSVALTGHSKAVNSIQWSLNQAHLLA 176
              +I ++D+  +VL  +R +    S  + +  ++S++LTGH+KAV +I WS +  HLLA
Sbjct: 118 VLGSISDSDVPRHVLSSVRHRPKGSSLQTEMPSRMSISLTGHTKAVTAIDWSTSHVHLLA 177

Query: 175 SAGMDQKVHVWNVWSKNQKKACSLEHHNAAVKDVRWSPQGLSLLSCGYDCSTRLVDIE 2
           SAG+D  V+VWNVWS ++KK  +  HHNA VKDV+WS QGLSLLSCGYDC++RL D+E
Sbjct: 178 SAGLDGAVYVWNVWSNDKKKVRAFLHHNAPVKDVKWSKQGLSLLSCGYDCTSRLFDVE 235


>ref|XP_002866048.1| WD-40 repeat family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297311883|gb|EFH42307.1| WD-40 repeat family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 455

 Score =  150 bits (380), Expect = 2e-34
 Identities = 87/236 (36%), Positives = 129/236 (54%), Gaps = 17/236 (7%)
 Frame = -1

Query: 658 MDLLCSAYAEPSDDEDETLNDHRVAKRHRSRQHHAPAGDPSPSNRRHIHRP--------- 506
           MDL+C++Y   SDDE E +++ R+     +     P+  P P      ++P         
Sbjct: 1   MDLICNSYGNDSDDEPEPVSNERLTSEIATAPS-IPSKRPYPVPEERQYKPPRRPYPPHG 59

Query: 505 SLTDPAEPASLST-------SRYISKRERAMXXXXXXXXXXXXXXXXXXXXXAGTSPAA- 350
           S +DP   +S+S         RY+SKRER++                       +SP   
Sbjct: 60  SYSDPQTSSSVSVPVPVPVPGRYVSKRERSLLASVSTIPTQDQSSDLNQKP--SSSPTVL 117

Query: 349 DAIFNTDLLPNVLVKLRSQAPFHSQSSNITGKLSVALTGHSKAVNSIQWSLNQAHLLASA 170
            +I ++D+  +VL  +  +    S  + +  ++S++LTGH+KAV +I WS +  HLLASA
Sbjct: 118 GSISDSDVPRHVLSSVTHRPKGSSLRTEMPSRMSISLTGHTKAVTAIDWSTSHVHLLASA 177

Query: 169 GMDQKVHVWNVWSKNQKKACSLEHHNAAVKDVRWSPQGLSLLSCGYDCSTRLVDIE 2
           G+D   +VWNVWS ++KK  +  HHNA VKDV+WS QGLSLLSCGYDC +RL D+E
Sbjct: 178 GLDSVAYVWNVWSNDKKKVRAFLHHNAPVKDVKWSKQGLSLLSCGYDCMSRLFDVE 233


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