BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00031486
         (1338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga...    88   4e-15
gb|ABA98898.1| retrotransposon protein, putative, unclassified [...    86   2e-14
gb|ABN08723.1| Polynucleotidyl transferase, Ribonuclease H fold ...    84   1e-13
ref|XP_002446679.1| hypothetical protein SORBIDRAFT_06g020406 [S...    79   3e-12
gb|ABA97040.1| retrotransposon protein, putative, unclassified [...    79   3e-12

>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1389

 Score = 88.2 bits (217), Expect = 4e-15
 Identities = 104/430 (24%), Positives = 178/430 (41%), Gaps = 33/430 (7%)
 Frame = +1

Query: 22   LDFWNDPWILDIPLN--YKPTF--VNMDLADCLSINMIAPNGIINSDA--CLDVFGPNIN 183
            + FW D WI   PLN  Y PT    N+ +A+C        NG+   D    L +  PNI 
Sbjct: 948  ISFWTDNWIFQYPLNSKYVPTVGSENIKVAECF-------NGLGGWDIPKLLTLVPPNI- 999

Query: 184  LLTLSTISFDSDLKNEWIWWPLS--SRHSLV--ATVYDHLNSFDFASAWKGWNNIWKLNV 351
            +  +S++   S  + + + W L+   ++S+   A++   +N          W  IW ++ 
Sbjct: 1000 VKAISSVFIPSSSQQDRLLWGLTPTGQYSVKSGASLIREVNGGTIEKVEFNW--IWGIHA 1057

Query: 352  PPRVKIFLWKVAHGKLPTGAYLYRLNIGPASRCSFCGLFPDSADHILWNCSKILACWHTV 531
            PP++K FLWK  +  L T + L R +I     C FC    ++  H+ + C   L  +  +
Sbjct: 1058 PPKIKNFLWKACNDGLATTSRLERSHIFVPQNCCFCDCPSETICHLCFQCPFTLDIYSHL 1117

Query: 532  LTRLGLST--SLLHHLEFGSWLTMNFNCCVSNDFTKAYIANTA---*HIWTARCLLIFQS 696
              +       S    L+  S+ ++   C +  + T  Y+   +    H+W  R  LIF +
Sbjct: 1118 EDKFQWPAYPSWFSTLQLSSFRSVLEACHI--NLTLEYLTKLSIVWWHVWYFRNKLIFNN 1175

Query: 697  INPDFSKIPHLAWSSTSDFYAAK-HIHSRESPLHLYSKHLSILIASDASWDP-------- 849
             +  FS+   +  S    +  A   I S  +PL    K L +    +  W P        
Sbjct: 1176 ESTSFSQASFIIHSFMGKWEKANLEIPSFNTPLPKDCK-LPVRSGKNLIWSPPNEDVLKV 1234

Query: 850  -------ISSQAGFGFIIFTNFQKNLFAEASG-GSCESSVHVEIQAILLSLTCCHS-NNL 1002
                    + QA +GF+I  +  + L A A   G   S +  E   +L  +    S  N 
Sbjct: 1235 NFDGSKLDNGQAAYGFVIRNSNGEVLMARAKALGVYPSILMAEAMGLLEGIKGAISLQNW 1294

Query: 1003 SPDLLFSDCLSAIKLILEYDNSVGWRYASKIRDIQSLISLWP*FSFDHLIRDFNSVADKL 1182
            S  ++F     A+   +    +  W  A+ I D  +L+  +    F H  R+ N +AD +
Sbjct: 1295 SRKIIFEGDNIAVINAMSPSATGPWTIANIILDAGALLGHFQEVKFQHCYREANRLADFM 1354

Query: 1183 ALTGRLNPQL 1212
            A  G  +P++
Sbjct: 1355 AHKGHSHPEV 1364


>gb|ABA98898.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1188

 Score = 85.9 bits (211), Expect = 2e-14
 Identities = 94/436 (21%), Positives = 166/436 (38%), Gaps = 32/436 (7%)
 Frame = +1

Query: 19   SLDFWNDPWILDIPLNYKPTFVNMDLADCLSINMIAPNGIINSDACLDVFGPNINLLTLS 198
            S+  W DPW L    + +P     +       +++  NG  + D    +F P ++   + 
Sbjct: 745  SIKIWRDPW-LPRDFSRRPITPKGNCRLKWVADLLDQNGSWDRDVISQLFWP-LDGEIIK 802

Query: 199  TISFDSDLKNEWI-WWPLSSRHSLVATVY---------DHLNSFDFASAWKGWNNIWKLN 348
            +I   S    ++I W+P       + + Y            +S       K WN++WK N
Sbjct: 803  SIRLSSRQDEDFIAWYPDKMGQFSIRSAYMLAVQLANAGESSSSSGNDTKKVWNHVWKCN 862

Query: 349  VPPRVKIFLWKVAHGKLPTGAYLYRLNIGPASRCSFCGLFPDSADHILWNCSKILACWHT 528
            +P +VK+F W+     LPT     + N   +  CSFCGL P+   H LW C      W  
Sbjct: 863  IPQKVKVFSWRAISNCLPTMVNKKKRNPELSDVCSFCGLEPEDVAHALWRCPHARRYWDL 922

Query: 529  VLTRLGLSTSLLHHLEFGSWLTMNFNCCVSNDFTKAYIANTA*HIWTARCLLIFQSINPD 708
            + + + +   L    E   W+ ++F   +S D    ++ +    IW  R  +      P 
Sbjct: 923  MSSEMQVQRILYGSGEGSDWI-LDFLESISEDDRPVFLMSLW-RIWYTRNEITHDKAAPP 980

Query: 709  -----------FSKIPHLAWSSTSDFYAAKHIHSRESPLHLYSKHLSILIASDASW---- 843
                        + +  +     ++  + KH+   + P       L+      + W    
Sbjct: 981  VEVSKRFVRSYVNSLKEIKARPNANLGSGKHVIGEDRPKCKKQSVLAKWEKPPSGWMKLN 1040

Query: 844  -DPISSQAGFGFI--IFTNFQKNLFAEASG--GSCESSVHVEIQAILLSLTCCHSNNLSP 1008
             D    +   G I  I  N   ++   A G    C+S++  EI A    +       L P
Sbjct: 1041 VDGSYQEDNIGEISAILRNSTGDVIFAACGFVEQCQSALEAEILACKEGIGLALQWTLLP 1100

Query: 1009 DLLFSDCLSAIKLILEYDNSVGWRYASK--IRDIQSLISLWP*FSFDHLIRDFNSVADKL 1182
             ++ SDC  A++LIL        R  +K  +R+IQ ++          + R+ N ++  L
Sbjct: 1101 IIIESDCAEALQLILSEGK---LRSVNKFLVREIQGMVKGAREMKLKKVNRNCNHISHVL 1157

Query: 1183 ALTGRLNPQLSMFFQG 1230
            A  GR    +  +  G
Sbjct: 1158 ANKGRCESLMDFWPDG 1173


>gb|ABN08723.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 355

 Score = 83.6 bits (205), Expect = 1e-13
 Identities = 73/273 (26%), Positives = 111/273 (40%), Gaps = 33/273 (12%)
 Frame = +1

Query: 16  SSLDFWNDPWILDIPLNYKPTFVNMDLADCLSIN-MIAPNGII-NSDACLDVFGPNINLL 189
           S ++ W  PWI ++P ++KP+       + L++N ++   G+  N      +F P     
Sbjct: 7   SKINLWTMPWIRNLP-SHKPSTPMPAHHEDLTVNYLLNLEGLSWNQQIVTSIFNPQDAAA 65

Query: 190 TLSTISFDSDLKNEWIWWPLSSRHSLVATVY----DHLNSFDFASAWKGWNNIWKLNVPP 357
            LS    +  L +  IW   ++ +  V + Y    D L+  D A     W NIW LN+P 
Sbjct: 66  ILSIPLHNRLLSDTRIWKTTTTGNYTVKSAYRICSDLLHPHDSAHNNSSWMNIWNLNIPH 125

Query: 358 RVKIFLWKVAHGKLPTGAYLYRLNIGPASRCSFCGLFPDSADHILWNCSKILACW----- 522
           RV+ FLW++AH  LPT   L    I     C     F +   H+ + C+K + CW     
Sbjct: 126 RVRAFLWRLAHNCLPTRVNLNARGIQCEESCVMFENFAECHTHLFFVCAKAMDCWKNIGL 185

Query: 523 HTVLTRL--------GLSTSLLHH-----------LEFGSWLTMNFNCCVSNDFTKAYI- 642
           H VL+ L         L    +H            L +  W + N     S D T A   
Sbjct: 186 HVVLSELLPLANNFTTLLFDFMHRLCSQQQQAAGMLLWSLWKSRNIKLWDSTDTTTAITI 245

Query: 643 --ANTA*HIWTARCLLIFQSINPDFSKIPHLAW 735
             A    H W+       Q INP+     H++W
Sbjct: 246 SRAKDTLHEWSCMQSAKTQPINPNH----HISW 274


>ref|XP_002446679.1| hypothetical protein SORBIDRAFT_06g020406 [Sorghum bicolor]
            gi|241937862|gb|EES11007.1| hypothetical protein
            SORBIDRAFT_06g020406 [Sorghum bicolor]
          Length = 395

 Score = 79.0 bits (193), Expect = 3e-12
 Identities = 74/311 (23%), Positives = 127/311 (40%), Gaps = 14/311 (4%)
 Frame = +1

Query: 292  NSFDFASAWKGWNNIWKLNVPPRVKIFLWKVAHGKLPTGAYLYRLNIGPASRCSFCGLFP 471
            N  DFA++ K W  +W + +P ++K+F W++A   +PT + L   N+   S C  CG   
Sbjct: 65   NCSDFATSQKEWKKLWSMKLPSKIKVFCWRLALNSIPTASVLKSRNLASTSHCKICGAVD 124

Query: 472  DSADHILWNCSKILACWHTVLTRLGLSTSLLHHLEFGS---WLTMNFNCCVSNDFTKAYI 642
            D+ +H L  C+     W  +   +   T+L+ HL   +   W+T  F CC         +
Sbjct: 125  DTWEHSLLFCTMSKCVWALLDEDI---TNLISHLRISNPKHWIT--FMCCNIPQADGIRV 179

Query: 643  ANTA*HIWTARCLLIFQSI-NPDFS-------KIPHLAWSSTSDFYAAKHIHSRE-SPLH 795
              T   IW AR   I + +    FS       +I  L      +        S++ + L 
Sbjct: 180  LVTCWAIWQARRKAIHEGVFQSPFSIMVTINRQIEELQMIRGMELKGGNQNQSKQKTRLW 239

Query: 796  LYSKHLSILIASDASWDPISSQAGFGFIIFTNFQKNLFAEASG--GSCESSVHVEIQAIL 969
                     I  DA+ + + S+   G ++  N +    A ++    +      +E  A L
Sbjct: 240  KAPDQGKCKINVDAAVNRVGSKGAVG-VVCRNDRGEFIAPSAMIIPNITEPETLEGMACL 298

Query: 970  LSLTCCHSNNLSPDLLFSDCLSAIKLILEYDNSVGWRYASKIRDIQSLISLWP*FSFDHL 1149
             +L       +   ++ SDCL+ ++ I E        Y   ++DIQ     +    F H 
Sbjct: 299  EALALAEDCGIRKIIVASDCLNIVRNISEMPLCT---YVMILKDIQERAKSFDYVRFAHE 355

Query: 1150 IRDFNSVADKL 1182
             R+ N  AD+L
Sbjct: 356  GRECNREADRL 366


>gb|ABA97040.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1913

 Score = 78.6 bits (192), Expect = 3e-12
 Identities = 89/408 (21%), Positives = 156/408 (38%), Gaps = 39/408 (9%)
 Frame = +1

Query: 10   NLSSLDFWNDPWILDIPLNY--KPTFVNMDLADCLSINMIAPNGIINSDACLDVFGPNIN 183
            N  S+  W DPWI   P ++  +P     +       +++  +G  +      VF P I+
Sbjct: 1503 NGRSVRIWRDPWI---PRDHSCRPITTKRNCRVKWVSDLLGQDGSWDVQKVSRVFLP-ID 1558

Query: 184  LLTLSTISFDSDLKNEWI-WWPLSSRHSLVATVYDHLNSFDFA---------SAWKGWNN 333
               +  I     L+ +++ W P       V + Y    S D+A         +  K W+ 
Sbjct: 1559 ADEILKIRTSVRLEEDFLSWHPDRLGQFSVRSAYKLAISLDYADESSSSSGQNPQKIWDL 1618

Query: 334  IWKLNVPPRVKIFLWKVAHGKLPTGAYLYRLNIGPASRCSFCGLFPDSADHILWNCSKIL 513
            IWK NVP +VK+F W+ A+  L       + N+  +  C  CG   +   H L  C   +
Sbjct: 1619 IWKCNVPQKVKVFCWRAANNCLANQENKKKRNLERSEICCICGNETEDVSHALSRCPHAV 1678

Query: 514  ACWHTVLTRLGLSTSLLHHLEFGSWLTMNFNCCVSNDFTKAYIANTA*HIWTARCLLIFQ 693
              W  +     LS ++  +   GSW         + +  +  +      IW  R  L   
Sbjct: 1679 HLWEAMKAAGSLSLNVAGNATGGSWFFDQIENTPAEE--RMMLCMMLWRIWFVRNELYHG 1736

Query: 694  SINPDF-----------SKIPHLAWSSTSDFYAAKHIHSRESPLHLYSKHLSILIAS--- 831
             + P             S +  +     +D    KH+  + + +   + HL  ++ +   
Sbjct: 1737 KVPPPIAVSKRFLESYCSSLLEIKQHPHADVVRGKHVVQQPTRMRSEANHLRRVVPARWE 1796

Query: 832  -----------DASWDPISSQAGFGFIIFTNFQKNLFAEASG--GSCESSVHVEIQAILL 972
                       D S+D  SS+ G G ++  +    +F+ A G    C S +  E+ A   
Sbjct: 1797 KPQMGWMKLNVDGSYDSNSSKGGIGVVLRDSVGTVIFS-ACGFLERCSSPLESELLACKE 1855

Query: 973  SLTCCHSNNLSPDLLFSDCLSAIKLILEYDNSVGWRYASKIRDIQSLI 1116
             +       L P +L SDCL A+ +I      +  + A  +RDI+ L+
Sbjct: 1856 GINLALQWTLLPIILESDCLIAVNMIQSVKKEMS-QLAYLVRDIRELM 1902