BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00031484
         (688 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004160887.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   232   5e-59
ref|XP_004148162.1| PREDICTED: pentatricopeptide repeat-containi...   232   5e-59
ref|XP_002510931.1| pentatricopeptide repeat-containing protein,...   221   1e-55
ref|XP_002263650.1| PREDICTED: pentatricopeptide repeat-containi...   217   2e-54
ref|XP_003533519.1| PREDICTED: pentatricopeptide repeat-containi...   209   4e-52

>ref|XP_004160887.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g25270, chloroplastic-like [Cucumis sativus]
          Length = 489

 Score =  232 bits (592), Expect = 5e-59
 Identities = 110/167 (65%), Positives = 139/167 (83%)
 Frame = +2

Query: 188 LSYPKSSPSPLFISPTPLRLTREQALDHVLAELETSIDNGIKVDPSIFSSLLETCARMRS 367
           LS+PKSSP+PL I P P   ++ QALD VL +LE SIDNG+ +DP IFSSLLE C ++++
Sbjct: 10  LSFPKSSPTPLLIHPKPFFQSKIQALDAVLTDLEASIDNGLFIDPEIFSSLLELCYQLQA 69

Query: 368 LSHGVRLHRIIPRSLLRRNAGVSSKLLRLYASCGLVDRAHRMFDEMPERNKSSFVWNSLL 547
           + HG+R+HR+IP +LLRRN G+SSKLLRLYAS G ++ AH++FDEM  RN S+F WNSL+
Sbjct: 70  IHHGIRIHRLIPTNLLRRNVGISSKLLRLYASFGYMEDAHQVFDEMGNRNFSAFAWNSLI 129

Query: 548 SGYAELGLYEDAMALYYQMVEDGVQPDDFTFPRVLKSCARIGSIQHG 688
           SGYAELGLYEDA+ALY+QM E+GV+PD+FTFPRVLK+C  IGSIQ G
Sbjct: 130 SGYAELGLYEDALALYFQMEEEGVEPDNFTFPRVLKACGGIGSIQIG 176



 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 36/120 (30%), Positives = 70/120 (58%)
 Frame = +2

Query: 299 DNGIKVDPSIFSSLLETCARMRSLSHGVRLHRIIPRSLLRRNAGVSSKLLRLYASCGLVD 478
           + G++ D   F  +L+ C  + S+  G  +HR + RS    +  V + L+ +Y+ CG + 
Sbjct: 150 EEGVEPDNFTFPRVLKACGGIGSIQIGEAVHRHVVRSGFAGDVFVLNALVDMYSKCGCIV 209

Query: 479 RAHRMFDEMPERNKSSFVWNSLLSGYAELGLYEDAMALYYQMVEDGVQPDDFTFPRVLKS 658
           RA ++FD++  ++  S  WNS+L+GY   GL+ +A+ ++ QM+++G +PD      +L +
Sbjct: 210 RARKVFDQIEYKDIVS--WNSMLTGYTRHGLHFEALDIFDQMIQEGYEPDSVALSTLLSN 267



 Score = 69.3 bits (168), Expect = 7e-10
 Identities = 42/133 (31%), Positives = 74/133 (55%), Gaps = 2/133 (1%)
 Frame = +2

Query: 296 IDNGIKVDPSIFSSLLETCARMRSLSHGVRLHRIIPRSLLRRNAGVSSKLLRLYASCGLV 475
           I  G + D    S+LL   + M+   H   +H  + R  +  N  +++ L+ +YA CG +
Sbjct: 250 IQEGYEPDSVALSTLLSNISSMKFKLH---IHGWVIRHGVEWNLSIANSLIVMYAKCGKL 306

Query: 476 DRAHRMFDEMPERNKSSFVWNSLLSGYAELGLYEDAMAL-YYQMVED-GVQPDDFTFPRV 649
           +RA  +F +MP+++  S  WNS++S +     +  A AL Y++++E  GV PD  TF  +
Sbjct: 307 NRAKWLFQQMPQKDMVS--WNSIISAH-----FNSAEALTYFEVMESLGVSPDGVTFVSL 359

Query: 650 LKSCARIGSIQHG 688
           L +CA +G ++ G
Sbjct: 360 LSTCAHLGLVKEG 372


>ref|XP_004148162.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
           chloroplastic-like [Cucumis sativus]
          Length = 489

 Score =  232 bits (592), Expect = 5e-59
 Identities = 110/167 (65%), Positives = 139/167 (83%)
 Frame = +2

Query: 188 LSYPKSSPSPLFISPTPLRLTREQALDHVLAELETSIDNGIKVDPSIFSSLLETCARMRS 367
           LS+PKSSP+PL I P P   ++ QALD VL +LE SIDNG+ +DP IFSSLLE C ++++
Sbjct: 10  LSFPKSSPTPLLIHPKPFFQSKIQALDAVLTDLEASIDNGLFIDPEIFSSLLELCYQLQA 69

Query: 368 LSHGVRLHRIIPRSLLRRNAGVSSKLLRLYASCGLVDRAHRMFDEMPERNKSSFVWNSLL 547
           + HG+R+HR+IP +LLRRN G+SSKLLRLYAS G ++ AH++FDEM  RN S+F WNSL+
Sbjct: 70  IHHGIRIHRLIPTNLLRRNVGISSKLLRLYASFGYMEDAHQVFDEMGNRNFSAFAWNSLI 129

Query: 548 SGYAELGLYEDAMALYYQMVEDGVQPDDFTFPRVLKSCARIGSIQHG 688
           SGYAELGLYEDA+ALY+QM E+GV+PD+FTFPRVLK+C  IGSIQ G
Sbjct: 130 SGYAELGLYEDALALYFQMEEEGVEPDNFTFPRVLKACGGIGSIQIG 176



 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 36/120 (30%), Positives = 70/120 (58%)
 Frame = +2

Query: 299 DNGIKVDPSIFSSLLETCARMRSLSHGVRLHRIIPRSLLRRNAGVSSKLLRLYASCGLVD 478
           + G++ D   F  +L+ C  + S+  G  +HR + RS    +  V + L+ +Y+ CG + 
Sbjct: 150 EEGVEPDNFTFPRVLKACGGIGSIQIGEAVHRHVVRSGFAGDVFVLNALVDMYSKCGCIV 209

Query: 479 RAHRMFDEMPERNKSSFVWNSLLSGYAELGLYEDAMALYYQMVEDGVQPDDFTFPRVLKS 658
           RA ++FD++  ++  S  WNS+L+GY   GL+ +A+ ++ QM+++G +PD      +L +
Sbjct: 210 RARKVFDQIEYKDIVS--WNSMLTGYTRHGLHFEALDIFDQMIQEGYEPDSVALSTLLSN 267



 Score = 69.3 bits (168), Expect = 7e-10
 Identities = 42/133 (31%), Positives = 74/133 (55%), Gaps = 2/133 (1%)
 Frame = +2

Query: 296 IDNGIKVDPSIFSSLLETCARMRSLSHGVRLHRIIPRSLLRRNAGVSSKLLRLYASCGLV 475
           I  G + D    S+LL   + M+   H   +H  + R  +  N  +++ L+ +YA CG +
Sbjct: 250 IQEGYEPDSVALSTLLSNISSMKFKLH---IHGWVIRHGVEWNLSIANSLIVMYAKCGKL 306

Query: 476 DRAHRMFDEMPERNKSSFVWNSLLSGYAELGLYEDAMAL-YYQMVED-GVQPDDFTFPRV 649
           +RA  +F +MP+++  S  WNS++S +     +  A AL Y++++E  GV PD  TF  +
Sbjct: 307 NRAKWLFQQMPQKDMVS--WNSIISAH-----FNSAEALTYFEVMESLGVSPDGVTFVSL 359

Query: 650 LKSCARIGSIQHG 688
           L +CA +G ++ G
Sbjct: 360 LSTCAHLGLVKEG 372


>ref|XP_002510931.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550046|gb|EEF51533.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 461

 Score =  221 bits (563), Expect = 1e-55
 Identities = 105/172 (61%), Positives = 137/172 (79%)
 Frame = +2

Query: 173 RDLHTLSYPKSSPSPLFISPTPLRLTREQALDHVLAELETSIDNGIKVDPSIFSSLLETC 352
           R+ + LS+P  SP+PL I+      T+ QALD V+ +LE+SI  GIK+D  I SSLLETC
Sbjct: 44  RNANGLSFPVPSPTPLLINLNTYTQTKLQALDDVIKDLESSIGKGIKIDTQIISSLLETC 103

Query: 353 ARMRSLSHGVRLHRIIPRSLLRRNAGVSSKLLRLYASCGLVDRAHRMFDEMPERNKSSFV 532
            R+ S+ HG+R+HR+IP S+LR+N GVSSKLLRLYASCG +D AH+MFDEM  R++S+F 
Sbjct: 104 YRLNSIDHGMRIHRLIPTSILRKNTGVSSKLLRLYASCGYMDEAHQMFDEMSNRDESAFA 163

Query: 533 WNSLLSGYAELGLYEDAMALYYQMVEDGVQPDDFTFPRVLKSCARIGSIQHG 688
           WNSL++GY+ELGLYEDA+ALY+QM E+ V+PD+FTFPRVLK+C  +G IQ G
Sbjct: 164 WNSLIAGYSELGLYEDAIALYFQMDEEYVEPDEFTFPRVLKACGGLGLIQVG 215



 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 39/131 (29%), Positives = 72/131 (54%)
 Frame = +2

Query: 296 IDNGIKVDPSIFSSLLETCARMRSLSHGVRLHRIIPRSLLRRNAGVSSKLLRLYASCGLV 475
           + +G+++D    SSLL   A + S   GV++H  I R  ++ +  +++ L+ +Y+S G +
Sbjct: 289 LQDGLELDSVAISSLL---ANVSSFKLGVQIHGWILRRGMQWDLSIANSLIVMYSSNGKL 345

Query: 476 DRAHRMFDEMPERNKSSFVWNSLLSGYAELGLYEDAMALYYQMVEDGVQPDDFTFPRVLK 655
            +   +FD M ER+  S  WNS++S + +       +A + +M   G  PD+ TF   L 
Sbjct: 346 VQTRWLFDNMQERDVVS--WNSIISAHCK---DPQVLAYFERMENSGAFPDNITFVSALS 400

Query: 656 SCARIGSIQHG 688
           +CA +G ++ G
Sbjct: 401 ACAHLGLVRDG 411



 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 37/129 (28%), Positives = 66/129 (51%), Gaps = 2/129 (1%)
 Frame = +2

Query: 308 IKVDPSIFSSLLETCARMRSLSHGVRLHRIIPRSLLRRNAGVSSKLLRLYASCGLVDRAH 487
           ++ D   F  +L+ C  +  +  G  +HR + R     +   S+ L+ +YA CG + +A 
Sbjct: 192 VEPDEFTFPRVLKACGGLGLIQVGEAVHRDLIRLGFANDRFASNALVDMYAKCGDIVKAR 251

Query: 488 RMFDEMPERNKSSFVWNSLLSGYAELGLYEDAMALYYQMVEDGVQPDDFTFPRVLK--SC 661
            +F++M   +K S  WNS+L+GY   GL  +A     +M++DG++ D      +L   S 
Sbjct: 252 SIFEKM--ASKDSVSWNSMLTGYVRHGLIIEAFHTGRRMLQDGLELDSVAISSLLANVSS 309

Query: 662 ARIGSIQHG 688
            ++G   HG
Sbjct: 310 FKLGVQIHG 318


>ref|XP_002263650.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
           chloroplastic [Vitis vinifera]
           gi|296084180|emb|CBI24568.3| unnamed protein product
           [Vitis vinifera]
          Length = 516

 Score =  217 bits (553), Expect = 2e-54
 Identities = 104/167 (62%), Positives = 133/167 (79%)
 Frame = +2

Query: 188 LSYPKSSPSPLFISPTPLRLTREQALDHVLAELETSIDNGIKVDPSIFSSLLETCARMRS 367
           L +PKSSP+PL I+  P   T+ QAL+ +L +L+ SI +GI VD  IFSSLLETC ++++
Sbjct: 35  LVFPKSSPTPLLINHKPRNHTKLQALEALLRDLQASIQDGITVDAQIFSSLLETCFQLQA 94

Query: 368 LSHGVRLHRIIPRSLLRRNAGVSSKLLRLYASCGLVDRAHRMFDEMPERNKSSFVWNSLL 547
             HG+R+HR+IP SLLR++  +SSKLLRLYAS G ++ AHR+FD+M  RN+S+F WNSL+
Sbjct: 95  FDHGIRIHRLIPTSLLRKSVALSSKLLRLYASIGRIEEAHRLFDQMSRRNRSAFAWNSLI 154

Query: 548 SGYAELGLYEDAMALYYQMVEDGVQPDDFTFPRVLKSCARIGSIQHG 688
           SGYAELGLYEDAMALY+QM E+GV PD FTFPRVLK+C  IGSI  G
Sbjct: 155 SGYAELGLYEDAMALYFQMEEEGVVPDRFTFPRVLKACGGIGSISVG 201



 Score = 66.2 bits (160), Expect = 6e-09
 Identities = 35/110 (31%), Positives = 64/110 (58%)
 Frame = +2

Query: 299 DNGIKVDPSIFSSLLETCARMRSLSHGVRLHRIIPRSLLRRNAGVSSKLLRLYASCGLVD 478
           + G+  D   F  +L+ C  + S+S G  +HR + R     +  V + L+ +YA CG + 
Sbjct: 175 EEGVVPDRFTFPRVLKACGGIGSISVGEEVHRHVVRCGFADDGFVLNALVDMYAKCGDIV 234

Query: 479 RAHRMFDEMPERNKSSFVWNSLLSGYAELGLYEDAMALYYQMVEDGVQPD 628
           +A ++FD++  R+  S  WNS+L+GY   GL   A++++ +M++ G +PD
Sbjct: 235 KARKVFDKIVCRDSVS--WNSMLTGYIRHGLPLQALSIFRRMLQYGFEPD 282



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 36/110 (32%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
 Frame = +2

Query: 365 SLSHGVRLHRIIPRSLLRRNAGVSSKLLRLYASCGLVDRAHRMFDEMPERNKSSFVWNSL 544
           SL    ++H  + R  ++ N  +++ L+ LY++ G +D+A  +FD MPER+  S  WNS+
Sbjct: 295 SLKLAGQIHGWVLRRGVQWNLSIANSLIVLYSNHGKLDQACWLFDHMPERDVVS--WNSI 352

Query: 545 LSGYAELGLYEDAMALYY--QMVEDGVQPDDFTFPRVLKSCARIGSIQHG 688
           +S +      +D  A+ Y  +M +  V PD  TF  +L +CA +G ++ G
Sbjct: 353 ISAHR-----KDLKAITYFSRMQKADVLPDVVTFVSLLSACAHLGLVKDG 397


>ref|XP_003533519.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
           chloroplastic-like [Glycine max]
          Length = 526

 Score =  209 bits (532), Expect = 4e-52
 Identities = 97/167 (58%), Positives = 133/167 (79%)
 Frame = +2

Query: 188 LSYPKSSPSPLFISPTPLRLTREQALDHVLAELETSIDNGIKVDPSIFSSLLETCARMRS 367
           LS+PK   +PL I   P   T+ +AL+ V+ +LE S++ GIK+DP I++SLLETC R ++
Sbjct: 46  LSFPKPKSTPLLIHHRPHPKTKLEALEQVVKDLEASVEKGIKIDPEIYASLLETCYRFQA 105

Query: 368 LSHGVRLHRIIPRSLLRRNAGVSSKLLRLYASCGLVDRAHRMFDEMPERNKSSFVWNSLL 547
           + HG+R+HR+IP SLL +N G+SSKLLRLYASCG +D AH +FD+M +R+ S+F WNSL+
Sbjct: 106 ILHGIRVHRLIPTSLLHKNVGISSKLLRLYASCGYLDDAHDLFDQMAKRDTSAFPWNSLI 165

Query: 548 SGYAELGLYEDAMALYYQMVEDGVQPDDFTFPRVLKSCARIGSIQHG 688
           SGYA++G Y++A+ALY+QMVE+GV+ D FTFPRVLK CA IGS+Q G
Sbjct: 166 SGYAQVGHYDEAIALYFQMVEEGVEADLFTFPRVLKVCAGIGSVQVG 212



 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 41/136 (30%), Positives = 74/136 (54%)
 Frame = +2

Query: 266 DHVLAELETSIDNGIKVDPSIFSSLLETCARMRSLSHGVRLHRIIPRSLLRRNAGVSSKL 445
           D  +A     ++ G++ D   F  +L+ CA + S+  G  +HR   R+    +  + + L
Sbjct: 175 DEAIALYFQMVEEGVEADLFTFPRVLKVCAGIGSVQVGEEVHRHAIRAGFAADGFILNAL 234

Query: 446 LRLYASCGLVDRAHRMFDEMPERNKSSFVWNSLLSGYAELGLYEDAMALYYQMVEDGVQP 625
           + +Y+ CG + +A ++FD+MP R+  S  WNS+L+ Y   GL   AM ++ QM+ +G +P
Sbjct: 235 VDMYSKCGDIVKARKVFDKMPHRDPVS--WNSMLTAYVHHGLEVQAMNIFRQMLLEGCEP 292

Query: 626 DDFTFPRVLKSCARIG 673
           D  +   VL   + +G
Sbjct: 293 DSVSISTVLTGVSSLG 308



 Score = 65.9 bits (159), Expect = 7e-09
 Identities = 36/108 (33%), Positives = 64/108 (59%)
 Frame = +2

Query: 365 SLSHGVRLHRIIPRSLLRRNAGVSSKLLRLYASCGLVDRAHRMFDEMPERNKSSFVWNSL 544
           SL  GV++H  +       N  +++ L+ +Y++ G +++A  +F+ MPER+  S  WNS+
Sbjct: 306 SLGLGVQIHGWVISQGHEWNLSIANSLIMMYSNHGRLEKARWVFNLMPERDVVS--WNSI 363

Query: 545 LSGYAELGLYEDAMALYYQMVEDGVQPDDFTFPRVLKSCARIGSIQHG 688
           +S + +     +A+A + QM   GVQPD  TF  +L +CA +G ++ G
Sbjct: 364 ISAHCKR---REALAFFEQMEGAGVQPDKITFVSILSACAYLGLLKDG 408