BLASTX nr result

ID: Dioscorea21_contig00031452 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00031452
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAQ03221.1|AF411840_1 MADS box transcription factor [Elaeis g...    82   6e-14
emb|CAE46186.1| AP1-like MADS box transcription factor [Elaeis g...    82   6e-14
dbj|BAL70392.1| apetala1/squamosa protein [Alstroemeria ligtu su...    76   2e-12
gb|AAX53099.1| AP1-like protein [Magnolia grandiflora]                 74   1e-11
gb|AAP83414.1| FRUITFULL-like MADS-box [Tradescantia virginiana]       72   5e-11

>gb|AAQ03221.1|AF411840_1 MADS box transcription factor [Elaeis guineensis]
          Length = 250

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 46/93 (49%), Positives = 59/93 (63%), Gaps = 4/93 (4%)
 Frame = +3

Query: 3   DLEKKEKELQDQNRLLEKEITEKERAMAIVQQAQWEXXXXXXXXXXXXXXFLIIDPLPTV 182
           +L+KKEK LQ+QN++LEKE+ EK++  A+ QQA WE              FLI D LPT+
Sbjct: 153 ELQKKEKSLQEQNKMLEKELMEKQKVKALNQQAPWEQQGPPQTSSSSPTSFLIGDSLPTL 212

Query: 183 NIGDYQGRGSEDEDGV---QNRIGSSLL-PWML 269
           NIG YQ  G+E  +     Q RIG+SLL PWML
Sbjct: 213 NIGTYQCSGNEHGEEAAQPQVRIGNSLLPPWML 245


>emb|CAE46186.1| AP1-like MADS box transcription factor [Elaeis guineensis]
          Length = 207

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 46/93 (49%), Positives = 59/93 (63%), Gaps = 4/93 (4%)
 Frame = +3

Query: 3   DLEKKEKELQDQNRLLEKEITEKERAMAIVQQAQWEXXXXXXXXXXXXXXFLIIDPLPTV 182
           +L+KKEK LQ+QN++LEKE+ EK++  A+ QQA WE              FLI D LPT+
Sbjct: 110 ELQKKEKSLQEQNKMLEKELMEKQKVKALNQQAPWEQQGPPQTSSSSPTSFLIGDSLPTL 169

Query: 183 NIGDYQGRGSEDEDGV---QNRIGSSLL-PWML 269
           NIG YQ  G+E  +     Q RIG+SLL PWML
Sbjct: 170 NIGTYQCSGNEHGEEAAQPQVRIGNSLLPPWML 202


>dbj|BAL70392.1| apetala1/squamosa protein [Alstroemeria ligtu subsp. ligtu]
          Length = 251

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 40/94 (42%), Positives = 58/94 (61%), Gaps = 5/94 (5%)
 Frame = +3

Query: 3   DLEKKEKELQDQNRLLEKEITEKERAMAIVQQAQWEXXXXXXXXXXXXXXFLIIDPLPTV 182
           +L++KEK L++QN +LEK++ EKE+  +++QQ QWE              FL+ D LP +
Sbjct: 153 ELQQKEKSLREQNSILEKKLVEKEKTNSLMQQTQWEQQGHPQTSSNSSLSFLMADQLPNL 212

Query: 183 NIGDYQGRGSE-DEDGVQN---RIGS-SLLPWML 269
           NIG YQG  S  DEDG +    R+G+ +  PWML
Sbjct: 213 NIGTYQGSASSIDEDGTEQSLARVGTCNFPPWML 246


>gb|AAX53099.1| AP1-like protein [Magnolia grandiflora]
          Length = 236

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 42/92 (45%), Positives = 56/92 (60%), Gaps = 2/92 (2%)
 Frame = +3

Query: 3   DLEKKEKELQDQNRLLEKEITEKERAMAIVQQAQWEXXXXXXXXXXXXXXFLIIDPLPTV 182
           +L++KEK L++QN +LEKEI EKE+AMA  QQAQWE              FL+  PLPT+
Sbjct: 147 ELQRKEKSLREQNNMLEKEIQEKEKAMA--QQAQWE----QQNQSQSSPSFLLASPLPTL 200

Query: 183 NIGDYQGRGSEDEDGVQ--NRIGSSLLPWMLR 272
           NIG Y      +E+G +   R  S + PWM+R
Sbjct: 201 NIGTYHQGNEVEEEGARPPARTNSLMPPWMVR 232


>gb|AAP83414.1| FRUITFULL-like MADS-box [Tradescantia virginiana]
          Length = 241

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 41/94 (43%), Positives = 56/94 (59%), Gaps = 5/94 (5%)
 Frame = +3

Query: 3   DLEKKEKELQDQNRLLEKEITEKERAMAIVQQAQWEXXXXXXXXXXXXXXFLIIDPLPTV 182
           +L++KEK L++QN+ LEKEI EK++  A+ QQA WE              F+I +  PT+
Sbjct: 148 ELQRKEKSLEEQNKNLEKEILEKQKIKALAQQAHWEHQNQPAPRGSPPRPFVIAESHPTL 207

Query: 183 NIGDYQGR----GSEDEDGVQNRIGSSLL-PWML 269
           NIG +QGR     +E+      RI SSLL PWML
Sbjct: 208 NIGHFQGRTNAVEAEENQQPXMRICSSLLPPWML 241


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